Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G0913 Cannabis sativa HOM05D006311 ORTHO05D007732 3.9e-103 378.3 205 100.0
Atru.chr3.3143 Acer truncatum HOM05D006311 ORTHO05D007732 2.3e-63 246.1 161 84.5
Cpa.g.sc195.39 Carica papaya HOM05D006311 ORTHO05D007732 7.4e-62 241.1 210 71.4
GSVIVG01036060001 Vitis vinifera HOM05D006311 ORTHO05D007732 2.8e-61 239.2 173 76.9
CAN.G745.31 Capsicum annuum HOM05D006311 ORTHO05D007732 5.3e-60 235.0 154 83.1
PGSC0003DMG400019619 Solanum tuberosum HOM05D006311 ORTHO05D007732 9.0e-60 234.2 151 84.1
Solyc11g068790.2 Solanum lycopersicum HOM05D006311 ORTHO05D007732 1.2e-59 233.8 151 83.4
Nitab4.5_0000893g0010 Nicotiana tabacum HOM05D006311 ORTHO05D007732 2.0e-59 233.0 147 84.4
CiPaw.13G131700 Carya illinoinensis HOM05D006311 ORTHO05D007732 3.4e-59 232.3 200 67.0
Cc01_g08620 Coffea canephora HOM05D006311 ORTHO05D007732 4.5e-59 231.9 157 80.3
Dinv05953 Davidia involucrata HOM05D006311 ORTHO05D007732 1.0e-58 230.7 175 74.3
Lj3g0006801 Lotus japonicus HOM05D006311 ORTHO05D007732 1.0e-58 230.7 178 73.0
Sopen11g027510 Solanum pennellii HOM05D006311 ORTHO05D007732 1.0e-58 230.7 148 83.8
Oeu048845.1 Olea europaea HOM05D006311 ORTHO05D007732 1.7e-58 229.9 208 66.3
QL01p011364 Quercus lobata HOM05D006311 ORTHO05D007732 1.7e-58 229.9 211 66.4
Nitab4.5_0001135g0160 Nicotiana tabacum HOM05D006311 ORTHO05D007732 3.8e-58 228.8 187 71.1
Lsat_1_v5_gn_2_35940 Lactuca sativa HOM05D006311 ORTHO05D007732 6.5e-58 228.0 155 80.0
QL01p011627 Quercus lobata HOM05D006311 ORTHO05D007732 6.5e-58 228.0 215 65.1
ClCG02G022370 Citrullus lanatus HOM05D006311 ORTHO05D007732 2.5e-57 226.1 164 77.4
Cfa009969 Carpinus fangiana HOM05D006311 ORTHO05D007732 7.2e-57 224.6 165 76.4
Peaxi162Scf00224g00818 Petunia axillaris HOM05D006311 ORTHO05D007732 7.2e-57 224.6 154 79.2
TAR623G0571 Trochodendron aralioides HOM05D006311 ORTHO05D007732 7.2e-57 224.6 207 65.7
MD11G1172600 Malus domestica HOM05D006311 ORTHO05D007732 9.3e-57 224.2 168 74.4
AUR62001536 Chenopodium quinoa HOM05D006311 ORTHO05D007732 1.2e-56 223.8 157 76.4
DCAR_010317 Daucus carota HOM05D006311 ORTHO05D007732 1.2e-56 223.8 169 72.2
Nn2g14263 Nelumbo nucifera HOM05D006311 ORTHO05D007732 1.2e-56 223.8 210 65.2
Lalb_Chr01g0004961 Lupinus albus HOM05D006311 ORTHO05D007732 1.6e-56 223.4 207 64.7
Rhsim01G0202100 Rhododendron simsii HOM05D006311 ORTHO05D007732 1.6e-56 223.4 189 67.2
PGR119G0707 Punica granatum HOM05D006311 ORTHO05D007732 2.1e-56 223.0 164 75.0
Thecc.09G276000 Theobroma cacao HOM05D006311 ORTHO05D007732 3.6e-56 222.2 209 64.6
Actinidia07269 Actinidia chinensis HOM05D006311 ORTHO05D007732 4.6e-56 221.9 174 73.6
CSS0008256 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 4.6e-56 221.9 226 60.6
CSS0012591 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 4.6e-56 221.9 226 60.6
AUR62020246 Chenopodium quinoa HOM05D006311 ORTHO05D007732 4.6e-56 221.9 156 75.0
Ciclev10029330m.g Citrus clementina HOM05D006311 ORTHO05D007732 4.6e-56 221.9 164 74.4
MELO3C014513.2 Cucumis melo HOM05D006311 ORTHO05D007732 4.6e-56 221.9 199 66.3
Gohir.A09G097700 Gossypium hirsutum HOM05D006311 ORTHO05D007732 4.6e-56 221.9 212 62.3
Gorai.006G114200 Gossypium raimondii HOM05D006311 ORTHO05D007732 4.6e-56 221.9 212 62.3
HanXRQChr14g0433141 Helianthus annuus HOM05D006311 ORTHO05D007732 4.6e-56 221.9 158 77.2
Manes.11G165200 Manihot esculenta HOM05D006311 ORTHO05D007732 4.6e-56 221.9 160 77.5
TWI31G0202 Tripterygium wilfordii HOM05D006311 ORTHO05D007732 4.6e-56 221.9 150 80.0
CsaV3_6G038500 Cucumis sativus L. HOM05D006311 ORTHO05D007732 6.1e-56 221.5 199 65.8
Sed0028181 Sechium edule HOM05D006311 ORTHO05D007732 1.0e-55 220.7 153 79.1
Sabra09G0126500 Salix brachista HOM05D006311 ORTHO05D007732 1.3e-55 220.3 167 74.9
Sc21g0006890 Simmondsia chinensis HOM05D006311 ORTHO05D007732 1.3e-55 220.3 177 70.6
Eucgr.J00538 Eucalyptus grandis HOM05D006311 ORTHO05D007732 2.3e-55 219.5 169 72.8
AL4G21210 Arabidopsis lyrata HOM05D006311 ORTHO05D007732 3.0e-55 219.2 176 70.5
Migut.D02415 Erythranthe guttata HOM05D006311 ORTHO05D007732 3.0e-55 219.2 153 80.4
Gohir.D09G097500 Gossypium hirsutum HOM05D006311 ORTHO05D007732 3.0e-55 219.2 212 61.8
VMungo1127G2206 Vigna mungo HOM05D006311 ORTHO05D007732 3.0e-55 219.2 205 63.4
FAN25G1023 Fragaria x ananassa HOM05D006311 ORTHO05D007732 3.9e-55 218.8 155 77.4
Carub.0004s0790 Capsella rubella HOM05D006311 ORTHO05D007732 5.1e-55 218.4 173 71.1
BcaB06g28139 Brassica carinata HOM05D006311 ORTHO05D007732 6.7e-55 218.0 165 73.3
BolC4t27194H Brassica oleracea HOM05D006311 ORTHO05D007732 6.7e-55 218.0 177 68.4
RcHm_v2.0_Chr5g0047271 Rosa chinensis HOM05D006311 ORTHO05D007732 6.7e-55 218.0 216 63.4
Medtr4g052010 Medicago truncatula HOM05D006311 ORTHO05D007732 8.7e-55 217.6 167 71.9
Aa31LG5G8700 Aethionema arabicum HOM05D006311 ORTHO05D007732 1.1e-54 217.2 167 73.1
TPR.G4615 Trifolium pratense HOM05D006311 ORTHO05D007732 1.1e-54 217.2 211 63.5
COL.COLO4_22654 Corchorus olitorius HOM05D006311 ORTHO05D007732 1.5e-54 216.9 164 72.0
Glyma.11G180200 Glycine max HOM05D006311 ORTHO05D007732 1.5e-54 216.9 207 61.8
Potri.009G161800 Populus trichocarpa HOM05D006311 ORTHO05D007732 1.5e-54 216.9 169 72.2
FAN16G2986 Fragaria x ananassa HOM05D006311 ORTHO05D007732 1.9e-54 216.5 211 63.0
CARHR119830 Cardamine hirsuta HOM05D006311 ORTHO05D007732 2.5e-54 216.1 162 74.1
SalBow6G1677 Salvia bowleyana HOM05D006311 ORTHO05D007732 2.5e-54 216.1 162 75.9
unitig_0.g1470 Utricularia gibba HOM05D006311 ORTHO05D007732 2.5e-54 216.1 153 77.1
BcaB06g28142 Brassica carinata HOM05D006311 ORTHO05D007732 3.3e-54 215.7 166 71.1
Glyma.12G093300 Glycine max HOM05D006311 ORTHO05D007732 4.3e-54 215.3 207 62.3
BcaB01g03062 Brassica carinata HOM05D006311 ORTHO05D007732 5.7e-54 214.9 159 73.6
BcaB01g03063 Brassica carinata HOM05D006311 ORTHO05D007732 5.7e-54 214.9 159 73.6
Duzib150G1639 Durio zibethinus HOM05D006311 ORTHO05D007732 5.7e-54 214.9 135 83.7
ECA238G1364 Erigeron canadensis HOM05D006311 ORTHO05D007732 5.7e-54 214.9 138 81.9
C04p56680 Brassica napus HOM05D006311 ORTHO05D007732 7.4e-54 214.5 166 70.5
BolC4t27200H Brassica oleracea HOM05D006311 ORTHO05D007732 7.4e-54 214.5 166 70.5
FvH4_3g25980 Fragaria vesca HOM05D006311 ORTHO05D007732 7.4e-54 214.5 211 64.5
FAN11G0814 Fragaria x ananassa HOM05D006311 ORTHO05D007732 7.4e-54 214.5 211 64.5
PSO339G0926 Papaver somniferum HOM05D006311 ORTHO05D007732 9.7e-54 214.2 170 74.1
A04p20870 Brassica napus HOM05D006311 ORTHO05D007732 1.3e-53 213.8 180 68.3
PSO384G4643 Papaver somniferum HOM05D006311 ORTHO05D007732 1.3e-53 213.8 170 74.1
MSTRG.21022 Avicennia marina HOM05D006311 ORTHO05D007732 1.6e-53 213.4 204 63.7
SGA_v2.0_scaffold7G03983 Striga asiatica HOM05D006311 ORTHO05D007732 2.2e-53 213.0 154 77.9
AT2G27290 Arabidopsis thaliana HOM05D006311 ORTHO05D007732 3.7e-53 212.2 217 61.8
Lalb_Chr03g0028331 Lupinus albus HOM05D006311 ORTHO05D007732 3.7e-53 212.2 195 63.1
Aqoxy4G02682 Aquilegia oxysepala HOM05D006311 ORTHO05D007732 4.8e-53 211.8 194 62.9
arahy.Tifrunner.gnm1.ann1.INBK63 Arachis hypogaea HOM05D006311 ORTHO05D007732 4.8e-53 211.8 208 63.0
FAN21G2836 Fragaria x ananassa HOM05D006311 ORTHO05D007732 4.8e-53 211.8 211 63.5
Hund20941 Selenicereus undatus HOM05D006311 ORTHO05D007732 4.8e-53 211.8 176 67.6
MSTRG.18783 Avicennia marina HOM05D006311 ORTHO05D007732 6.3e-53 211.5 152 73.7
Sp4g10100 Schrenkiella parvula HOM05D006311 ORTHO05D007732 6.3e-53 211.5 170 69.4
arahy.Tifrunner.gnm1.ann1.HB0RZJ Arachis hypogaea HOM05D006311 ORTHO05D007732 1.1e-52 210.7 208 62.5
Phvul.011G097600 Phaseolus vulgaris HOM05D006311 ORTHO05D007732 1.4e-52 210.3 209 60.3
vmacro14327 Vaccinium macrocarpon HOM05D006311 ORTHO05D007732 1.8e-52 209.9 213 59.6
THA.LOC104826442 Tarenaya hassleriana HOM05D006311 ORTHO05D007732 2.4e-52 209.5 215 61.4
Thhalv10002100m.g Eutrema salsugineum HOM05D006311 ORTHO05D007732 3.1e-52 209.1 190 64.7
Ca_19458_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 5.3e-52 208.4 154 74.7
Psat7g187040 Pisum sativum HOM05D006311 ORTHO05D007732 5.3e-52 208.4 209 62.2
EL10Ac7g16320 Beta vulgaris HOM05D006311 ORTHO05D007732 9.1e-52 207.6 154 74.0
BraA04t17659Z Brassica rapa HOM05D001305 ORTHO05D007732 2.0e-51 206.5 168 69.0
MBI17_g18935_MAGBIO Magnolia biondii HOM05D006311 ORTHO05D007732 2.6e-51 206.1 177 68.9
Ca_29924_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 1.7e-50 203.4 207 61.8
HPP92_023073 Vanilla planifolia HOM05D006311 ORTHO05D007732 1.6e-48 196.8 148 72.3
SEGI_25108 Sequoiadendron giganteum HOM05D006311 ORTHO05D007732 7.9e-48 194.5 135 75.6
Mapoly0006s0182 Marchantia polymorpha HOM05D006311 ORTHO05D007732 1.1e-46 190.7 132 77.3
CDE02G3359 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 1.5e-46 190.3 147 71.4
Os04g0416000 Oryza sativa ssp. japonica HOM05D006311 ORTHO05D007732 2.0e-46 189.9 168 64.9
ATR0772G022 Amborella trichopoda HOM05D006311 ORTHO05D007732 2.6e-46 189.5 195 59.0
Pp3c14_19090 Physcomitrium patens HOM05D006311 ORTHO05D007732 2.6e-46 189.5 142 67.6
Lj1A261G25 Lonicera japonica HOM05D006311 ORTHO05D007732 4.4e-46 188.7 118 86.4
Prupe.6G139600 Prunus persica HOM05D006311 ORTHO05D007732 2.8e-45 186.0 174 63.2
CBR_g30935 Chara braunii HOM05D006311 ORTHO05D007732 3.7e-45 185.7 149 63.8
SMO146G0331 Selaginella moellendorffii HOM05D006311 ORTHO05D007732 1.4e-44 183.7 131 75.6
Haze_23330 Corylus avellana HOM05D006311 ORTHO05D007732 3.4e-43 179.1 119 81.5
SGA_v2.0_scaffold114G31957 Striga asiatica HOM05D006311 ORTHO05D007732 1.1e-41 174.1 117 79.5
AagrBONN_evm.TU.Sc2ySwM_117.22 Anthoceros agrestis HOM05D006311 ORTHO05D007732 4.7e-40 168.7 178 55.1
MCO12G429 Micromonas commoda HOM05D006311 ORTHO05D007732 2.6e-38 162.9 139 61.2
MD03G1152600 Malus domestica HOM05D006311 ORTHO05D007732 7.4e-38 161.4 110 79.1
Cre12.g485850 Chlamydomonas reinhardtii HOM05D006311 ORTHO05D007732 2.9e-34 149.4 138 56.5
PRCOL_00001321 Prasinoderma coloniale HOM05D006311 ORTHO05D007732 1.1e-33 147.5 135 61.5
BcaC02g08253 Brassica carinata HOM05D006311 ORTHO05D007732 6.7e-31 138.3 165 53.3
Gohir.D07G115550 Gossypium hirsutum HOM05D006311 ORTHO05D007732 6.7e-31 138.3 87 85.1
Gohir.A07G112050 Gossypium hirsutum HOM05D006311 ORTHO05D007732 1.5e-30 137.1 87 85.1
Gorai.001G123800 Gossypium raimondii HOM05D006311 ORTHO05D007732 2.6e-30 136.3 87 83.9
BcaC02g08251 Brassica carinata HOM05D006311 ORTHO05D007732 7.5e-30 134.8 126 61.9
BraA04t17657Z Brassica rapa HOM05D006311 ORTHO05D007732 1.1e-25 120.9 87 75.9
Oeu009055.1 Olea europaea HOM05D000182 ORTHO05D000112 2.7e-24 116.3 92 69.6
Actinidia24237 Actinidia chinensis HOM05D006311 ORTHO05D007732 1.8e-23 113.6 134 56.7
A04p20840 Brassica napus HOM05D006311 ORTHO05D007732 3.4e-22 109.4 79 75.9
Zm00001eb422070 Zea mays HOM05D006311 ORTHO05D007732 2.4e-20 103.2 96 63.5
CDE08G1250 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 6.5e-18 95.1 59 74.6
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 1.0e-07 61.2 105 37.1
VMungo1383G0342 Vigna mungo HOM05D006047 ORTHO05D007353 2.0e-06 57.0 116 33.6
GSVIVG01024006001 Vitis vinifera HOM05D006047 ORTHO05D007353 5.7e-06 55.5 123 34.1


User provided reference genes

Program Settings