Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G0878 Cannabis sativa HOM05D002277 ORTHO05D001770 2.3e-90 336.3 283 100.0
Sabra13G0126000 Salix brachista HOM05D002277 ORTHO05D001770 1.4e-13 81.3 218 37.6
Potri.019G127400 Populus trichocarpa HOM05D002277 ORTHO05D001770 3.0e-13 80.1 75 52.0
Potri.013G156100 Populus trichocarpa HOM05D002277 ORTHO05D001770 6.7e-13 79.0 214 35.0
Sabra19G0125500 Salix brachista HOM05D002277 ORTHO05D001770 5.7e-12 75.9 72 50.0
Sabra19G0129800 Salix brachista HOM05D002277 ORTHO05D001770 5.7e-12 75.9 72 50.0
Lalb_Chr10g0103731 Lupinus albus HOM05D002277 ORTHO05D001770 9.7e-12 75.1 74 51.4
Cpa.g.sc2.326 Carica papaya HOM05D002277 ORTHO05D001770 1.7e-11 74.3 72 50.0
Atru.chr1.2541 Acer truncatum HOM05D002277 ORTHO05D001770 2.2e-11 73.9 120 38.3
Lj2P1099T14 Lonicera japonica HOM05D002277 ORTHO05D001770 2.8e-11 73.6 38 81.6
Thecc.09G361400 Theobroma cacao HOM05D002277 ORTHO05D001770 4.8e-11 72.8 73 52.1
LjContig00141g0024890 Lotus japonicus HOM05D002277 ORTHO05D001770 6.3e-11 72.4 38 81.6
Cfa011806 Carpinus fangiana HOM05D002277 ORTHO05D001770 1.1e-10 71.6 74 50.0
COL.COLO4_11188 Corchorus olitorius HOM05D002277 ORTHO05D001770 1.1e-10 71.6 72 52.8
Haze_24445 Corylus avellana HOM05D002277 ORTHO05D001770 1.8e-10 70.9 74 48.6
Hma1.2p1_2270F.1_g318540 Hydrangea macrophylla HOM05D002277 ORTHO05D001770 2.4e-10 70.5 38 81.6
Actinidia34486 Actinidia chinensis HOM05D002277 ORTHO05D001770 4.1e-10 69.7 38 76.3
MSTRG.27280 Avicennia marina HOM05D002277 ORTHO05D001770 5.3e-10 69.3 38 73.7
Lalb_Chr17g0345561 Lupinus albus HOM05D002277 ORTHO05D001770 5.3e-10 69.3 74 47.3
Manes.18G140500 Manihot esculenta HOM05D002277 ORTHO05D001770 5.3e-10 69.3 209 34.0
Cc02_g05610 Coffea canephora HOM05D002277 ORTHO05D001770 6.9e-10 68.9 71 49.3
Gohir.D03G144700 Gossypium hirsutum HOM05D002277 ORTHO05D001770 1.2e-09 68.2 73 50.7
Gohir.A03G023900 Gossypium hirsutum HOM05D002277 ORTHO05D001770 1.5e-09 67.8 72 51.4
Gohir.D13G005350 Gossypium hirsutum HOM05D002277 ORTHO05D001770 1.5e-09 67.8 38 73.7
Gorai.013G006000 Gossypium raimondii HOM05D002277 ORTHO05D001770 1.5e-09 67.8 38 73.7
Nitab4.5_0000263g0230 Nicotiana tabacum HOM05D002277 ORTHO05D001770 1.5e-09 67.8 71 50.7
Nitab4.5_0004650g0010 Nicotiana tabacum HOM05D002277 ORTHO05D001770 1.5e-09 67.8 71 50.7
Oeu011363.1 Olea europaea HOM05D002277 ORTHO05D001770 1.5e-09 67.8 38 73.7
QL08p064469 Quercus lobata HOM05D002277 ORTHO05D001770 2.0e-09 67.4 71 47.9
MSTRG.8902 Avicennia marina HOM05D002277 ORTHO05D001770 2.6e-09 67.0 39 69.2
Cfa001229 Carpinus fangiana HOM05D002277 ORTHO05D001770 2.6e-09 67.0 71 47.9
Peaxi162Scf01078g00031 Petunia axillaris HOM05D002277 ORTHO05D001770 2.6e-09 67.0 39 69.2
TAR633G2754 Trochodendron aralioides HOM05D002277 ORTHO05D001770 2.6e-09 67.0 71 45.1
TAR636G1485 Trochodendron aralioides HOM05D002277 ORTHO05D001770 2.6e-09 67.0 71 45.1
Lj2C62G11 Lonicera japonica HOM05D002277 ORTHO05D001770 3.4e-09 66.6 40 70.0
Gorai.003G151900 Gossypium raimondii HOM05D002277 ORTHO05D001770 4.5e-09 66.2 73 50.7
Medtr5g075040 Medicago truncatula HOM05D002277 ORTHO05D001770 4.5e-09 66.2 39 71.8
Peaxi162Scf00464g00005 Petunia axillaris HOM05D002277 ORTHO05D001770 4.5e-09 66.2 38 78.9
ECA248G3276 Erigeron canadensis HOM05D002277 ORTHO05D001770 5.9e-09 65.9 40 62.5
FAN02G0282 Fragaria x ananassa HOM05D002277 ORTHO05D001770 5.9e-09 65.9 38 76.3
Glyma.02G234700 Glycine max HOM05D002277 ORTHO05D001770 5.9e-09 65.9 74 48.6
Oeu027170.1 Olea europaea HOM05D002277 ORTHO05D001770 5.9e-09 65.9 71 47.9
Prupe.6G043800 Prunus persica HOM05D002277 ORTHO05D001770 5.9e-09 65.9 44 75.0
Prupe.6G289800 Prunus persica HOM05D002277 ORTHO05D001770 5.9e-09 65.9 71 43.7
PGSC0003DMG400020563 Solanum tuberosum HOM05D002277 ORTHO05D001770 5.9e-09 65.9 38 71.1
VMungo0647G0196 Vigna mungo HOM05D002277 ORTHO05D001770 5.9e-09 65.9 74 47.3
Oeu058656.1 Olea europaea HOM05D002277 ORTHO05D001770 7.7e-09 65.5 41 63.4
RcHm_v2.0_Chr3g0460991 Rosa chinensis HOM05D002277 ORTHO05D001770 7.7e-09 65.5 38 73.7
TAR629G0672 Trochodendron aralioides HOM05D002277 ORTHO05D001770 7.7e-09 65.5 71 43.7
Phvul.008G249000 Phaseolus vulgaris HOM05D002277 ORTHO05D001770 1.0e-08 65.1 33 81.8
Psat2g051880 Pisum sativum HOM05D002277 ORTHO05D001770 1.0e-08 65.1 39 71.8
QL01p025249 Quercus lobata HOM05D002277 ORTHO05D001770 1.0e-08 65.1 79 46.8
Rhsim01G0241900 Rhododendron simsii HOM05D002277 ORTHO05D001770 1.0e-08 65.1 71 45.1
TPR.G25757 Trifolium pratense HOM05D002277 ORTHO05D001770 1.0e-08 65.1 39 71.8
Ciclev10002474m.g Citrus clementina HOM05D002277 ORTHO05D001770 1.3e-08 64.7 40 65.0
SalBow3G1041 Salvia bowleyana HOM05D002277 ORTHO05D001770 1.3e-08 64.7 38 65.8
CSS0032322 Camellia sinensis var. sinensis HOM05D002277 ORTHO05D001770 1.7e-08 64.3 38 71.1
CSS0043215 Camellia sinensis var. sinensis HOM05D002277 ORTHO05D001770 1.7e-08 64.3 38 71.1
FvH4_6g10240 Fragaria vesca HOM05D002277 ORTHO05D001770 1.7e-08 64.3 38 73.7
FAN14G3640 Fragaria x ananassa HOM05D002277 ORTHO05D001770 1.7e-08 64.3 38 73.7
Lsat_1_v5_gn_5_175260 Lactuca sativa HOM05D002277 ORTHO05D001770 1.7e-08 64.3 40 62.5
Manes.09G115500 Manihot esculenta HOM05D002277 ORTHO05D001770 1.7e-08 64.3 38 71.1
Sopen06g002340 Solanum pennellii HOM05D002277 ORTHO05D001770 1.7e-08 64.3 38 68.4
Gohir.A13G005650 Gossypium hirsutum HOM05D002277 ORTHO05D001770 2.2e-08 63.9 38 71.1
Oeu033238.1 Olea europaea HOM05D002277 ORTHO05D001770 2.2e-08 63.9 38 65.8
Potri.006G107200 Populus trichocarpa HOM05D002277 ORTHO05D001770 2.2e-08 63.9 38 71.1
Sabra06G0083400 Salix brachista HOM05D002277 ORTHO05D001770 2.2e-08 63.9 38 71.1
Solyc06g007420.1 Solanum lycopersicum HOM05D002277 ORTHO05D001770 2.2e-08 63.9 38 68.4
Solyc06g050370.1 Solanum lycopersicum HOM05D002277 ORTHO05D001770 2.2e-08 63.9 38 76.3
Thecc.10G174900 Theobroma cacao HOM05D002277 ORTHO05D001770 2.2e-08 63.9 71 45.1
TWI77G0059 Tripterygium wilfordii HOM05D002277 ORTHO05D001770 2.2e-08 63.9 40 72.5
Hma1.2p1_1240F.1_g269550 Hydrangea macrophylla HOM05D002277 ORTHO05D001770 2.9e-08 63.5 38 73.7
Actinidia29050 Actinidia chinensis HOM05D002277 ORTHO05D001770 3.8e-08 63.2 38 71.1
Aqoxy85s002 Aquilegia oxysepala HOM05D002277 ORTHO05D001770 3.8e-08 63.2 71 46.5
Duzib212G0079 Durio zibethinus HOM05D002277 ORTHO05D001770 3.8e-08 63.2 38 68.4
Eucgr.B04020 Eucalyptus grandis HOM05D002277 ORTHO05D001770 3.8e-08 63.2 38 68.4
Hma1.2p1_1052F.1_g252370 Hydrangea macrophylla HOM05D002277 ORTHO05D001770 3.8e-08 63.2 40 62.5
Potri.013G083101 Populus trichocarpa HOM05D002277 ORTHO05D001770 3.8e-08 63.2 38 71.1
Potri.016G133200 Populus trichocarpa HOM05D002277 ORTHO05D001770 3.8e-08 63.2 73 42.5
CiPaw.13G065900 Carya illinoinensis HOM05D002277 ORTHO05D001770 5.0e-08 62.8 218 33.0
COL.COLO4_03891 Corchorus olitorius HOM05D002277 ORTHO05D001770 5.0e-08 62.8 38 68.4
Haze_21138 Corylus avellana HOM05D002277 ORTHO05D001770 5.0e-08 62.8 38 65.8
Haze_21144 Corylus avellana HOM05D002277 ORTHO05D001770 5.0e-08 62.8 38 65.8
Haze_21148 Corylus avellana HOM05D002277 ORTHO05D001770 5.0e-08 62.8 38 65.8
FvH4_7g25590 Fragaria vesca HOM05D002277 ORTHO05D001770 5.0e-08 62.8 38 68.4
FAN03G3432 Fragaria x ananassa HOM05D002277 ORTHO05D001770 5.0e-08 62.8 38 68.4
FAN10G1465 Fragaria x ananassa HOM05D002277 ORTHO05D001770 5.0e-08 62.8 38 68.4
Manes.07G138400 Manihot esculenta HOM05D002277 ORTHO05D001770 5.0e-08 62.8 38 65.8
Manes.08G172400 Manihot esculenta HOM05D002277 ORTHO05D001770 5.0e-08 62.8 37 70.3
Nn2g13334 Nelumbo nucifera HOM05D002277 ORTHO05D001770 5.0e-08 62.8 71 43.7
Phvul.001G249100 Phaseolus vulgaris HOM05D002277 ORTHO05D001770 5.0e-08 62.8 38 68.4
TAR623G1362 Trochodendron aralioides HOM05D002277 ORTHO05D001770 5.0e-08 62.8 38 68.4
Duzib128G0618 Durio zibethinus HOM05D002277 ORTHO05D001770 6.5e-08 62.4 38 68.4
Duzib268G1048 Durio zibethinus HOM05D002277 ORTHO05D001770 6.5e-08 62.4 38 68.4
RcHm_v2.0_Chr1g0371651 Rosa chinensis HOM05D002277 ORTHO05D001770 6.5e-08 62.4 40 67.5
Sopen06g015870 Solanum pennellii HOM05D002277 ORTHO05D001770 6.5e-08 62.4 36 77.8
PGSC0003DMG400029071 Solanum tuberosum HOM05D002277 ORTHO05D001770 6.5e-08 62.4 36 77.8
Thecc.04G155300 Theobroma cacao HOM05D002277 ORTHO05D001770 6.5e-08 62.4 38 68.4
CSS0000970 Camellia sinensis var. sinensis HOM05D002277 ORTHO05D001770 8.5e-08 62.0 38 68.4
FAN06G1120 Fragaria x ananassa HOM05D002277 ORTHO05D001770 8.5e-08 62.0 38 68.4
Medtr3g072360 Medicago truncatula HOM05D002277 ORTHO05D001770 8.5e-08 62.0 38 68.4
Sabra13G0071200 Salix brachista HOM05D002277 ORTHO05D001770 8.5e-08 62.0 38 68.4
Sabra13G0072000 Salix brachista HOM05D002277 ORTHO05D001770 8.5e-08 62.0 38 68.4
Lsat_1_v5_gn_2_125460 Lactuca sativa HOM05D002277 ORTHO05D001770 1.1e-07 61.6 39 74.4
Lalb_Chr08g0231311 Lupinus albus HOM05D002277 ORTHO05D001770 1.1e-07 61.6 38 68.4
PSO339G6062 Papaver somniferum HOM05D002277 ORTHO05D001770 1.1e-07 61.6 38 68.4
PSO384G4841 Papaver somniferum HOM05D002277 ORTHO05D001770 1.1e-07 61.6 38 68.4
TWI31G0347 Tripterygium wilfordii HOM05D002277 ORTHO05D001770 1.1e-07 61.6 36 72.2
ATR0681G220 Amborella trichopoda HOM05D002277 ORTHO05D001770 1.4e-07 61.2 38 68.4
EL10Ac2g04267 Beta vulgaris HOM05D002277 ORTHO05D001770 1.4e-07 61.2 42 64.3
CDE12G0812 Ceratophyllum demersum HOM05D002277 ORTHO05D001770 1.4e-07 61.2 40 62.5
ClCG11G005770 Citrullus lanatus HOM05D002277 ORTHO05D001770 1.4e-07 61.2 71 42.3
COL.COLO4_30002 Corchorus olitorius HOM05D002277 ORTHO05D001770 1.4e-07 61.2 38 68.4
Sabra04G0150900 Salix brachista HOM05D002277 ORTHO05D001770 1.4e-07 61.2 72 43.1
TWI31G1041 Tripterygium wilfordii HOM05D002277 ORTHO05D001770 1.4e-07 61.2 36 69.4
FAN11G2787 Fragaria x ananassa HOM05D002277 ORTHO05D001770 1.9e-07 60.8 44 68.2
FAN16G0709 Fragaria x ananassa HOM05D002277 ORTHO05D001770 1.9e-07 60.8 44 68.2
FAN21G1843 Fragaria x ananassa HOM05D002277 ORTHO05D001770 1.9e-07 60.8 44 68.2
FAN25G3585 Fragaria x ananassa HOM05D002277 ORTHO05D001770 1.9e-07 60.8 44 68.2
MBI15_g33145_MAGBIO Magnolia biondii HOM05D002277 ORTHO05D001770 1.9e-07 60.8 38 68.4
CiPaw.14G052400 Carya illinoinensis HOM05D002277 ORTHO05D001770 2.5e-07 60.5 45 66.7
ECA248G3625 Erigeron canadensis HOM05D002277 ORTHO05D001770 2.5e-07 60.5 38 65.8
Gohir.A10G149200 Gossypium hirsutum HOM05D002277 ORTHO05D001770 2.5e-07 60.5 38 63.2
Gohir.D10G117600 Gossypium hirsutum HOM05D002277 ORTHO05D001770 2.5e-07 60.5 38 63.2
Gorai.011G129500 Gossypium raimondii HOM05D002277 ORTHO05D001770 2.5e-07 60.5 38 63.2
BcaC07g42035 Brassica carinata HOM05D010829 ORTHO05D001770 3.2e-07 60.1 42 66.7
A09p66660 Brassica napus HOM05D010829 ORTHO05D001770 3.2e-07 60.1 42 66.7
C08p50890 Brassica napus HOM05D010829 ORTHO05D001770 3.2e-07 60.1 42 66.7
BolC8t52617H Brassica oleracea HOM05D010829 ORTHO05D001770 3.2e-07 60.1 42 66.7
BraA09t42006Z Brassica rapa HOM05D010829 ORTHO05D001770 3.2e-07 60.1 42 66.7
MELO3C019998.2 Cucumis melo HOM05D002277 ORTHO05D001770 3.2e-07 60.1 71 40.8
Sed0026001 Sechium edule HOM05D002277 ORTHO05D001770 3.2e-07 60.1 38 65.8
Cfa017063 Carpinus fangiana HOM05D002277 ORTHO05D001770 4.2e-07 59.7 38 63.2
MELO3C020502.2 Cucumis melo HOM05D002277 ORTHO05D001770 4.2e-07 59.7 74 41.9
Glyma.11G235700 Glycine max HOM05D002277 ORTHO05D001770 4.2e-07 59.7 38 65.8
Glyma.18G021200 Glycine max HOM05D002277 ORTHO05D001770 4.2e-07 59.7 38 65.8
Lsat_1_v5_gn_5_148320 Lactuca sativa HOM05D002277 ORTHO05D001770 4.2e-07 59.7 38 65.8
Nitab4.5_0001060g0040 Nicotiana tabacum HOM05D002277 ORTHO05D001770 4.2e-07 59.7 38 60.5
TPR.G20193 Trifolium pratense HOM05D002277 ORTHO05D001770 4.2e-07 59.7 38 65.8
CsaV3_1G036680 Cucumis sativus L. HOM05D002277 ORTHO05D001770 5.5e-07 59.3 76 40.8
Glyma.14G053500 Glycine max HOM05D002277 ORTHO05D001770 5.5e-07 59.3 38 65.8
Gohir.A05G402100 Gossypium hirsutum HOM05D002277 ORTHO05D001770 5.5e-07 59.3 38 63.2
Gohir.D04G013500 Gossypium hirsutum HOM05D002277 ORTHO05D001770 5.5e-07 59.3 38 63.2
Gorai.012G015800 Gossypium raimondii HOM05D002277 ORTHO05D001770 5.5e-07 59.3 38 63.2
Lalb_Chr04g0250281 Lupinus albus HOM05D002277 ORTHO05D001770 5.5e-07 59.3 38 65.8
Prupe.2G261100 Prunus persica HOM05D002277 ORTHO05D001770 5.5e-07 59.3 38 65.8
Rhsim03G0150300 Rhododendron simsii HOM05D002277 ORTHO05D001770 5.5e-07 59.3 76 44.7
THA.LOC104800781 Tarenaya hassleriana HOM05D010829 ORTHO05D001770 5.5e-07 59.3 49 59.2
TPR.G649 Trifolium pratense HOM05D002277 ORTHO05D001770 5.5e-07 59.3 38 65.8
Atru.chr12.148 Acer truncatum HOM05D002277 ORTHO05D001770 7.2e-07 58.9 38 63.2
CiPaw.01G304400 Carya illinoinensis HOM05D002277 ORTHO05D001770 7.2e-07 58.9 38 65.8
HanXRQChr11g0337191 Helianthus annuus HOM05D002277 ORTHO05D001770 7.2e-07 58.9 38 63.2
Psat5g132120 Pisum sativum HOM05D002277 ORTHO05D001770 7.2e-07 58.9 38 65.8
CDE04G2385 Ceratophyllum demersum HOM05D002277 ORTHO05D001770 9.4e-07 58.5 40 60.0
Glyma.02G259200 Glycine max HOM05D002277 ORTHO05D001770 9.4e-07 58.5 38 65.8
QL07p032796 Quercus lobata HOM05D002277 ORTHO05D001770 9.4e-07 58.5 38 63.2
RcHm_v2.0_Chr5g0072421 Rosa chinensis HOM05D002277 ORTHO05D001770 9.4e-07 58.5 44 65.9
CsaV3_6G002200 Cucumis sativus L. HOM05D002277 ORTHO05D001770 1.2e-06 58.2 38 60.5
Ciclev10033390m.g Citrus clementina HOM05D002277 ORTHO05D001770 1.6e-06 57.8 40 67.5
Gohir.A10G181050 Gossypium hirsutum HOM05D002277 ORTHO05D001770 1.6e-06 57.8 38 65.8
Gorai.011G210700 Gossypium raimondii HOM05D002277 ORTHO05D001770 1.6e-06 57.8 38 65.8
LjContig00357g0012454 Lotus japonicus HOM05D002277 ORTHO05D001770 1.6e-06 57.8 38 63.2
Ciclev10012858m.g Citrus clementina HOM05D002277 ORTHO05D001770 2.1e-06 57.4 37 62.2
Lj1g0022794 Lotus japonicus HOM05D002277 ORTHO05D001770 2.1e-06 57.4 34 67.6
VMungo1383G0121 Vigna mungo HOM05D002277 ORTHO05D001770 2.1e-06 57.4 38 63.2
Actinidia33883 Actinidia chinensis HOM05D002277 ORTHO05D001770 2.7e-06 57.0 39 66.7
Gohir.D02G005400 Gossypium hirsutum HOM05D002277 ORTHO05D001770 2.7e-06 57.0 39 66.7
ClCG04G006490 Citrullus lanatus HOM05D002277 ORTHO05D001770 3.6e-06 56.6 38 60.5
Lalb_Chr07g0190701 Lupinus albus HOM05D002277 ORTHO05D001770 3.6e-06 56.6 31 74.2
VMungo1383G3736 Vigna mungo HOM05D002277 ORTHO05D001770 4.7e-06 56.2 33 69.7
CiPaw.09G218200 Carya illinoinensis HOM05D002277 ORTHO05D001770 6.1e-06 55.8 72 43.1
CDE04G2321 Ceratophyllum demersum HOM05D002277 ORTHO05D001770 6.1e-06 55.8 38 63.2
ClCG03G000230 Citrullus lanatus HOM05D002277 ORTHO05D001770 6.1e-06 55.8 41 65.9
Gorai.005G006100 Gossypium raimondii HOM05D002277 ORTHO05D001770 6.1e-06 55.8 39 64.1
Manes.10G005600 Manihot esculenta HOM05D002277 ORTHO05D001770 6.1e-06 55.8 73 42.5
Phvul.010G067300 Phaseolus vulgaris HOM05D002277 ORTHO05D001770 6.1e-06 55.8 31 74.2
TWI73G0449 Tripterygium wilfordii HOM05D002277 ORTHO05D001770 6.1e-06 55.8 42 61.9
VMungo0647G0912 Vigna mungo HOM05D002277 ORTHO05D001770 6.1e-06 55.8 38 60.5
MELO3C026052.2 Cucumis melo HOM05D002277 ORTHO05D001770 7.9e-06 55.5 38 57.9
Lj3g0001226 Lotus japonicus HOM05D002277 ORTHO05D001770 7.9e-06 55.5 34 64.7
Oeu024724.1 Olea europaea HOM05D002277 ORTHO05D001770 7.9e-06 55.5 38 57.9
Rhsim09G0183700 Rhododendron simsii HOM05D002277 ORTHO05D001770 7.9e-06 55.5 38 60.5
Sp1g05650 Schrenkiella parvula HOM05D010829 ORTHO05D001770 7.9e-06 55.5 48 54.2


User provided reference genes

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