Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G0650 Cannabis sativa HOM05D008721 ORTHO05D000482 2.1e-248 862.1 482 100.0
ATR0441G001 Amborella trichopoda HOM05D008721 ORTHO05D000137 1.2e-198 696.8 429 93.5
CANSAT25G0487 Cannabis sativa HOM05D008721 ORTHO05D000137 1.2e-198 696.8 445 91.0
CANSAT54G1171 Cannabis sativa HOM05D008721 ORTHO05D000482 1.5e-185 653.3 445 86.1
CANSAT25G1620 Cannabis sativa HOM05D008721 ORTHO05D000482 2.6e-182 642.5 445 83.1
CANSAT54G1761 Cannabis sativa HOM05D008721 ORTHO05D000137 5.2e-167 591.7 464 78.4
CANSAT35G0566 Cannabis sativa HOM05D008721 ORTHO05D000482 2.6e-158 562.8 368 91.3
CANSAT01G1167 Cannabis sativa HOM05D008721 ORTHO05D000482 1.0e-154 550.8 338 96.4
CANSAT01G1840 Cannabis sativa HOM05D008721 ORTHO05D000482 1.0e-138 497.7 302 97.7
CANSAT11G0393 Cannabis sativa HOM05D008721 ORTHO05D000137 3.9e-130 469.2 308 93.2
CANSAT25G3227 Cannabis sativa HOM05D008721 ORTHO05D000137 1.1e-127 461.1 308 91.9
CANSAT21G0858 Cannabis sativa HOM05D008721 ORTHO05D000137 5.0e-101 372.5 308 80.5
CANSAT56G1903 Cannabis sativa HOM05D008721 ORTHO05D000137 4.2e-100 369.4 299 83.6
CANSAT01G2915 Cannabis sativa HOM05D008721 ORTHO05D000482 1.3e-93 347.8 210 86.2
CANSAT80G1500 Cannabis sativa HOM05D008721 ORTHO05D000482 2.3e-82 310.5 171 87.7
CANSAT35G0999 Cannabis sativa HOM05D008721 ORTHO05D000137 8.6e-77 292.0 221 91.0
CANSAT80G0449 Cannabis sativa HOM05D008721 ORTHO05D000137 8.6e-77 292.0 190 82.6
CANSAT54G1642 Cannabis sativa HOM05D008721 ORTHO05D000482 1.2e-62 245.0 210 67.6
CANSAT11G2576 Cannabis sativa HOM05D008721 ORTHO05D000482 7.3e-60 235.7 117 95.7
CANSAT80G2705 Cannabis sativa HOM05D008721 ORTHO05D000482 2.4e-50 204.1 202 72.8
CANSAT01G2547 Cannabis sativa HOM05D008721 ORTHO05D000482 3.1e-50 203.8 192 80.7
CANSAT80G1051 Cannabis sativa HOM05D008721 ORTHO05D000137 2.5e-44 184.1 96 93.8
CANSAT01G3033 Cannabis sativa HOM05D008721 ORTHO05D000137 1.3e-43 181.8 96 92.7
CANSAT21G0504 Cannabis sativa HOM05D008721 ORTHO05D000482 1.4e-42 178.3 167 82.0
CANSAT80G0858 Cannabis sativa HOM05D008721 ORTHO05D000482 3.8e-32 143.7 165 75.8
CANSAT80G0634 Cannabis sativa HOM05D008721 ORTHO05D000482 2.4e-31 141.0 125 94.4
CANSAT80G1992 Cannabis sativa HOM05D008721 ORTHO05D000482 6.0e-30 136.3 131 87.8
CANSAT78G0538 Cannabis sativa HOM05D008721 ORTHO05D000482 1.8e-29 134.8 126 92.1
CANSAT80G1680 Cannabis sativa HOM05D008721 ORTHO05D000482 1.1e-28 132.1 131 86.3
CANSAT21G0799 Cannabis sativa HOM05D008721 ORTHO05D000482 8.1e-27 125.9 127 81.1
CANSAT21G0297 Cannabis sativa HOM05D008897 ORTHO05D014793 5.1e-21 106.7 463 28.9
CANSAT21G0546 Cannabis sativa HOM05D008721 ORTHO05D000482 3.3e-20 104.0 141 41.8
CANSAT25G3489 Cannabis sativa HOM05D008636 ORTHO05D000137 1.3e-19 102.1 451 26.6
CANSAT11G1365 Cannabis sativa HOM05D008636 ORTHO05D000137 2.0e-17 94.7 48 85.4
CANSAT21G0896 Cannabis sativa HOM05D008636 ORTHO05D000137 8.7e-13 79.3 186 36.6
CANSAT11G1535 Cannabis sativa HOM05D008636 ORTHO05D000137 3.3e-12 77.4 184 36.4
CANSAT25G3069 Cannabis sativa HOM05D008636 ORTHO05D000482 5.7e-12 76.6 159 37.7
CANSAT25G1632 Cannabis sativa HOM05D008636 ORTHO05D000482 2.8e-11 74.3 113 37.2
CANSAT35G0428 Cannabis sativa HOM05D008636 ORTHO05D000482 3.7e-11 73.9 113 37.2
CANSAT80G0150 Cannabis sativa HOM05D002262 ORTHO05D000482 3.7e-11 73.9 164 36.0
CANSAT78G2407 Cannabis sativa HOM05D008636 ORTHO05D000482 6.3e-11 73.2 113 36.3
CANSAT01G2439 Cannabis sativa HOM05D002262 ORTHO05D000482 1.1e-10 72.4 113 36.3
CANSAT78G2134 Cannabis sativa HOM05D002262 ORTHO05D000482 1.1e-10 72.4 113 36.3
CANSAT54G1479 Cannabis sativa HOM05D008897 ORTHO05D000482 1.4e-10 72.0 114 33.3
CANSAT56G3453 Cannabis sativa HOM05D008636 ORTHO05D000137 1.4e-10 72.0 86 50.0
CANSAT01G0053 Cannabis sativa HOM05D008636 ORTHO05D000137 1.8e-10 71.6 99 44.4
CANSAT11G0828 Cannabis sativa HOM05D008636 ORTHO05D000137 1.8e-10 71.6 99 44.4
CANSAT11G1407 Cannabis sativa HOM05D008636 ORTHO05D000137 1.8e-10 71.6 99 44.4
CANSAT35G0078 Cannabis sativa HOM05D008636 ORTHO05D000137 1.8e-10 71.6 99 44.4
CANSAT64G2498 Cannabis sativa HOM05D008636 ORTHO05D000137 1.8e-10 71.6 99 44.4
PGSC0003DMG400014694 Solanum tuberosum HOM05D005063 ORTHO05D000482 1.8e-10 71.6 113 37.2
CANSAT25G1366 Cannabis sativa HOM05D008636 ORTHO05D000137 2.4e-10 71.2 99 44.4
CANSAT35G1851 Cannabis sativa HOM05D008636 ORTHO05D000137 2.4e-10 71.2 99 44.4
Nitab4.5_0006980g0050 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.4e-10 71.2 97 40.2
CANSAT56G0417 Cannabis sativa HOM05D008636 ORTHO05D000137 3.1e-10 70.9 217 32.3
Solyc06g050740.1 Solanum lycopersicum HOM05D000679 ORTHO05D000482 3.1e-10 70.9 87 39.1
Sopen11g024470 Solanum pennellii HOM05D000679 ORTHO05D000482 3.1e-10 70.9 81 40.7
CANSAT35G1468 Cannabis sativa HOM05D008897 ORTHO05D000137 4.1e-10 70.5 421 25.2
CANSAT56G1233 Cannabis sativa HOM05D008636 ORTHO05D000137 4.1e-10 70.5 159 37.1
Solyc06g008150.3 Solanum lycopersicum HOM05D005063 ORTHO05D000482 5.3e-10 70.1 88 43.2
Sopen06g002980 Solanum pennellii HOM05D005063 ORTHO05D000482 5.3e-10 70.1 88 43.2
CANSAT54G0860 Cannabis sativa HOM05D008636 ORTHO05D000137 6.9e-10 69.7 85 49.4
Sopen09g026450 Solanum pennellii HOM05D000679 ORTHO05D000137 6.9e-10 69.7 81 40.7
CANSAT25G2067 Cannabis sativa HOM05D002262 ORTHO05D000482 2.0e-09 68.2 104 37.5
Nitab4.5_0003111g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.0e-09 68.2 91 41.8
Solyc08g014616.1 Solanum lycopersicum HOM05D000679 ORTHO05D000482 2.0e-09 68.2 81 39.5
CANSAT01G0478 Cannabis sativa HOM05D008636 ORTHO05D000482 2.6e-09 67.8 102 37.3
CANSAT11G0656 Cannabis sativa HOM05D008636 ORTHO05D000137 2.6e-09 67.8 168 36.3
Nitab4.5_0000326g0300 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.6e-09 67.8 95 37.9
Solyc03g034207.1 Solanum lycopersicum HOM05D000679 ORTHO05D000482 3.4e-09 67.4 81 39.5
CANSAT01G2866 Cannabis sativa HOM05D008897 ORTHO05D014793 4.5e-09 67.0 398 26.6
CAN.G374.2 Capsicum annuum HOM05D005063 ORTHO05D000482 5.9e-09 66.6 132 33.3
Nitab4.5_0002160g0110 Nicotiana tabacum HOM05D000713 ORTHO05D000482 7.7e-09 66.2 86 40.7
Sopen07g014970 Solanum pennellii HOM05D000679 ORTHO05D000482 1.3e-08 65.5 81 39.5
CANSAT78G2078 Cannabis sativa HOM05D008636 ORTHO05D000482 2.9e-08 64.3 88 37.5
Nitab4.5_0000924g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.0e-08 63.5 99 38.4
CANSAT80G2560 Cannabis sativa HOM05D008897 ORTHO05D000137 8.5e-08 62.8 196 27.6
Nitab4.5_0002338g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 8.5e-08 62.8 87 37.9
Sopen01g022800 Solanum pennellii HOM05D000679 ORTHO05D000482 1.1e-07 62.4 81 37.0
Solyc01g094420.3 Solanum lycopersicum HOM05D005063 ORTHO05D000482 1.4e-07 62.0 86 38.4
Sopen01g038220 Solanum pennellii HOM05D005063 ORTHO05D000482 1.4e-07 62.0 86 38.4
CANSAT21G0433 Cannabis sativa HOM05D008897 ORTHO05D000016 1.9e-07 61.6 144 31.9
CAN.G644.13 Capsicum annuum HOM05D000022 ORTHO05D000482 2.5e-07 61.2 87 36.8
PGSC0003DMG400000031 Solanum tuberosum HOM05D005063 ORTHO05D000482 2.5e-07 61.2 86 38.4
Sopen01g053420 Solanum pennellii HOM05D000679 ORTHO05D014266 5.5e-07 60.1 42 54.8
Nitab4.5_0010113g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 7.2e-07 59.7 48 47.9
Sopen10g007210 Solanum pennellii HOM05D000679 ORTHO05D000137 7.2e-07 59.7 42 54.8
Sopen12g022010 Solanum pennellii HOM05D000002 ORTHO05D000001 7.2e-07 59.7 42 54.8
PGSC0003DMG400034712 Solanum tuberosum HOM05D000679 ORTHO05D014686 7.2e-07 59.7 172 30.2
CANSAT11G1281 Cannabis sativa HOM05D002262 ORTHO05D000482 1.2e-06 58.9 89 37.1
CANSAT01G2590 Cannabis sativa HOM05D008897 ORTHO05D000137 1.6e-06 58.5 122 33.6
CANSAT54G0249 Cannabis sativa HOM05D008897 ORTHO05D000137 1.6e-06 58.5 91 37.4
CANSAT80G0664 Cannabis sativa HOM05D008897 ORTHO05D000137 1.6e-06 58.5 91 37.4
Nitab4.5_0000890g0200 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.6e-06 58.5 111 33.3
Nitab4.5_0012299g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.6e-06 58.5 178 27.5
Nitab4.5_0013596g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.6e-06 58.5 106 35.8
Nitab4.5_0000983g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.1e-06 58.2 47 51.1
Nitab4.5_0005263g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 2.1e-06 58.2 88 36.4
PGSC0003DMG400006343 Solanum tuberosum HOM05D000679 ORTHO05D000482 2.1e-06 58.2 63 44.4
ATR0614G001 Amborella trichopoda HOM05D008897 ORTHO05D014793 2.7e-06 57.8 183 31.1
CANSAT01G2792 Cannabis sativa HOM05D008636 ORTHO05D000137 2.7e-06 57.8 51 56.9
CANSAT25G0646 Cannabis sativa HOM05D008636 ORTHO05D000137 2.7e-06 57.8 51 56.9
CANSAT54G2329 Cannabis sativa HOM05D008636 ORTHO05D000137 2.7e-06 57.8 51 56.9
CANSAT80G1627 Cannabis sativa HOM05D008636 ORTHO05D000137 2.7e-06 57.8 51 56.9
Nitab4.5_0002353g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.7e-06 57.8 85 37.6
SGA_v2.0_scaffold160G37744 Striga asiatica HOM05D002262 ORTHO05D000137 2.7e-06 57.8 115 31.3
CANSAT54G0660 Cannabis sativa HOM05D008636 ORTHO05D000137 3.6e-06 57.4 51 56.9
CANSAT56G0181 Cannabis sativa HOM05D008897 ORTHO05D014793 3.6e-06 57.4 91 37.4
CANSAT56G3280 Cannabis sativa HOM05D008897 ORTHO05D000137 4.6e-06 57.0 199 28.6
CANSAT80G2874 Cannabis sativa HOM05D008897 ORTHO05D000137 4.6e-06 57.0 122 32.8
CAN.G1169.9 Capsicum annuum HOM05D005063 ORTHO05D000482 4.6e-06 57.0 107 34.6
Nitab4.5_0000252g0250 Nicotiana tabacum HOM05D006812 ORTHO05D000482 4.6e-06 57.0 102 32.4
Nitab4.5_0002750g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 4.6e-06 57.0 85 36.5
Nitab4.5_0003533g0100 Nicotiana tabacum HOM05D000679 ORTHO05D000482 4.6e-06 57.0 102 31.4
Nitab4.5_0013794g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 6.1e-06 56.6 47 48.9
Nitab4.5_0014780g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 6.1e-06 56.6 48 45.8
Nitab4.5_0017301g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 6.1e-06 56.6 47 48.9
CAN.G1862.3 Capsicum annuum HOM05D000361 ORTHO05D000137 7.9e-06 56.2 39 56.4
Nitab4.5_0004808g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 7.9e-06 56.2 92 35.9
Nitab4.5_0008559g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 7.9e-06 56.2 40 55.0


User provided reference genes

Program Settings