Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G0582 Cannabis sativa HOM05D006297 ORTHO05D007873 1.2e-210 736.5 449 100.0
Manes.02G129500 Manihot esculenta HOM05D006297 ORTHO05D007873 7.0e-65 252.3 451 43.0
QL01p030412 Quercus lobata HOM05D006297 ORTHO05D007873 7.3e-62 242.3 448 41.7
Potri.009G035300 Populus trichocarpa HOM05D006297 ORTHO05D007873 1.8e-60 237.7 436 42.7
CiPaw.13G089900 Carya illinoinensis HOM05D006297 ORTHO05D007873 5.2e-60 236.1 453 42.2
CsaV3_1G034520 Cucumis sativus L. HOM05D006297 ORTHO05D007873 2.0e-59 234.2 373 43.7
MELO3C020609.2 Cucumis melo HOM05D006297 ORTHO05D007873 4.4e-59 233.0 364 43.4
Sabra09G0025100 Salix brachista HOM05D006297 ORTHO05D010418 2.2e-58 230.7 433 41.1
PGR119G2469 Punica granatum HOM05D006297 ORTHO05D007873 3.2e-57 226.9 453 39.5
Dinv34277 Davidia involucrata HOM05D006297 ORTHO05D007873 6.6e-55 219.2 451 39.2
Haze_24152 Corylus avellana HOM05D006297 ORTHO05D007873 2.5e-54 217.2 449 40.5
GSVIVG01031399001 Vitis vinifera HOM05D006297 ORTHO05D007873 4.7e-53 213.0 432 38.9
ClCG03G001300 Citrullus lanatus HOM05D006297 ORTHO05D007873 1.1e-52 211.8 372 40.9
Actinidia33772 Actinidia chinensis HOM05D006297 ORTHO05D007873 1.8e-52 211.1 452 38.9
MD11G1095400 Malus domestica HOM05D006297 ORTHO05D007873 2.3e-52 210.7 414 44.9
Potri.001G243900 Populus trichocarpa HOM05D006297 ORTHO05D007873 9.8e-51 205.3 484 37.8
Cfa011548 Carpinus fangiana HOM05D006297 ORTHO05D007873 2.2e-50 204.1 450 38.4
Migut.D00880 Erythranthe guttata HOM05D006297 ORTHO05D007873 4.9e-50 203.0 468 36.3
Eucgr.B02311 Eucalyptus grandis HOM05D006297 ORTHO05D007873 8.3e-50 202.2 455 38.5
TWI79G0566 Tripterygium wilfordii HOM05D000001 ORTHO05D010418 8.3e-50 202.2 412 39.6
Hma1.2p1_0615F.1_g189690 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 7.1e-49 199.1 405 38.0
Sed0017584 Sechium edule HOM05D006297 ORTHO05D007873 2.3e-47 194.1 407 38.6
Sed0011562 Sechium edule HOM05D006297 ORTHO05D007873 3.0e-47 193.7 376 39.4
Ciclev10029821m.g Citrus clementina HOM05D006297 ORTHO05D007873 5.1e-47 193.0 337 43.3
CSS0020880 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 8.6e-47 192.2 376 40.4
Ca_20618_v3 Cicer arietinum L. HOM05D006297 ORTHO05D007873 8.6e-47 192.2 461 37.1
Lalb_Chr22g0352441 Lupinus albus HOM05D006297 ORTHO05D007873 1.5e-46 191.4 441 39.5
Cc01_g13310 Coffea canephora HOM05D006297 ORTHO05D007873 3.6e-45 186.8 500 35.2
Nitab4.5_0006916g0050 Nicotiana tabacum HOM05D006297 ORTHO05D007873 4.7e-45 186.4 499 34.7
Peaxi162Scf00481g00328 Petunia axillaris HOM05D006297 ORTHO05D007873 3.1e-44 183.7 398 38.9
Medtr4g064830 Medicago truncatula HOM05D006297 ORTHO05D007873 7.6e-43 179.1 459 36.8
Prupe.6G070900 Prunus persica HOM05D006297 ORTHO05D007873 9.9e-43 178.7 407 42.0
Thecc.09G316300 Theobroma cacao HOM05D006297 ORTHO05D007873 1.7e-42 177.9 402 37.8
THA.LOC104799430 Tarenaya hassleriana HOM05D006297 ORTHO05D007873 6.4e-42 176.0 455 34.7
Sabra16G0148100 Salix brachista HOM05D000026 ORTHO05D000094 2.4e-41 174.1 390 39.2
Aqoxy1G00878 Aquilegia oxysepala HOM05D006297 ORTHO05D007873 5.4e-41 172.9 476 39.9
MSTRG.18559 Avicennia marina HOM05D006297 ORTHO05D007873 5.4e-41 172.9 458 33.4
Lj3g0014453 Lotus japonicus HOM05D006297 ORTHO05D007873 7.1e-41 172.6 481 36.4
Sopen06g032780 Solanum pennellii HOM05D006297 ORTHO05D007873 9.2e-41 172.2 487 33.5
Solyc06g076370.4 Solanum lycopersicum HOM05D006297 ORTHO05D007873 2.7e-40 170.6 487 34.1
Duzib168G2114 Durio zibethinus HOM05D006297 ORTHO05D007873 1.1e-38 165.2 383 36.8
Psat7g210960 Pisum sativum HOM05D006297 ORTHO05D007873 5.6e-38 162.9 476 35.5
COL.COLO4_18571 Corchorus olitorius HOM05D006297 ORTHO05D007873 1.2e-37 161.8 391 36.3
Glyma.12G060000 Glycine max HOM05D006297 ORTHO05D007873 2.1e-37 161.0 445 36.2
Nn2g13426 Nelumbo nucifera HOM05D006297 ORTHO05D007873 4.7e-37 159.8 512 38.1
TAR369G0304 Trochodendron aralioides HOM05D006297 ORTHO05D007873 1.8e-36 157.9 329 45.6
TPR.G23574 Trifolium pratense HOM05D006297 ORTHO05D007873 2.4e-36 157.5 404 36.6
Glyma.11G136300 Glycine max HOM05D006297 ORTHO05D007873 5.2e-36 156.4 480 35.0
CAN.G394.75 Capsicum annuum HOM05D006297 ORTHO05D007873 3.4e-35 153.7 485 33.2
Lalb_Chr03g0026471 Lupinus albus HOM05D006297 ORTHO05D007873 2.2e-34 151.0 408 39.2
DCAR_007431 Daucus carota HOM05D006297 ORTHO05D000003 3.8e-34 150.2 418 33.3
RcHm_v2.0_Chr5g0066301 Rosa chinensis HOM05D006297 ORTHO05D007873 3.8e-34 150.2 563 33.0
Lj3g0003832 Lotus japonicus HOM05D006297 ORTHO05D007873 2.4e-33 147.5 482 33.6
Lalb_Chr01g0003491 Lupinus albus HOM05D006297 ORTHO05D007873 3.2e-33 147.1 446 34.8
SGA_v2.0_scaffold54G19479 Striga asiatica HOM05D006297 ORTHO05D007873 7.1e-33 146.0 453 31.6
Aa31LG4G15680 Aethionema arabicum HOM05D006297 ORTHO05D007873 3.5e-32 143.7 413 32.2
Phvul.011G061900 Phaseolus vulgaris HOM05D006297 ORTHO05D007873 1.3e-31 141.7 448 33.7
CSS0015831 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 3.0e-31 140.6 439 33.5
Thhalv10002567m.g Eutrema salsugineum HOM05D006297 ORTHO05D007873 3.9e-31 140.2 418 35.9
VMungo1127G1804 Vigna mungo HOM05D006297 ORTHO05D007873 3.9e-31 140.2 506 36.6
BcaC01g01889 Brassica carinata HOM05D006297 ORTHO05D007873 6.6e-31 139.4 410 32.9
MBI05_g35633_MAGBIO Magnolia biondii HOM05D006297 ORTHO05D007873 6.6e-31 139.4 341 33.4
Rhsim13G0077500 Rhododendron simsii HOM05D000001 ORTHO05D010418 6.6e-31 139.4 461 29.3
FvH4_3g36910 Fragaria vesca HOM05D006297 ORTHO05D007873 8.7e-31 139.0 592 31.1
Sc12g0001260 Simmondsia chinensis HOM05D006297 ORTHO05D007873 1.1e-30 138.7 402 33.6
C03p70940 Brassica napus HOM05D006297 ORTHO05D007873 1.9e-30 137.9 410 32.7
BolC3t19369H Brassica oleracea HOM05D006297 ORTHO05D007873 1.9e-30 137.9 410 32.7
CARHR154920 Cardamine hirsuta HOM05D006297 ORTHO05D007873 1.9e-30 137.9 420 31.7
Sp5g14970 Schrenkiella parvula HOM05D006297 ORTHO05D007873 1.9e-30 137.9 419 35.1
Glyma.15G035500 Glycine max HOM05D006297 ORTHO05D007873 2.5e-30 137.5 454 34.6
Psat5g118640 Pisum sativum HOM05D006297 ORTHO05D007873 2.5e-30 137.5 153 54.9
A06p20810 Brassica napus HOM05D006297 ORTHO05D007873 4.3e-30 136.7 413 32.2
Carub.0005s1301 Capsella rubella HOM05D006297 ORTHO05D007873 2.8e-29 134.0 423 35.2
BraA01t02522Z Brassica rapa HOM05D006297 ORTHO05D007873 3.6e-29 133.7 414 31.4
A01p26050 Brassica napus HOM05D006297 ORTHO05D007873 6.2e-29 132.9 423 31.4
Glyma.13G338800 Glycine max HOM05D006297 ORTHO05D007873 8.1e-29 132.5 406 35.2
AL5G25730 Arabidopsis lyrata HOM05D006297 ORTHO05D007873 1.1e-28 132.1 417 36.5
PGSC0003DMG400030329 Solanum tuberosum HOM05D006297 ORTHO05D007873 1.1e-28 132.1 389 32.6
arahy.Tifrunner.gnm1.ann1.19P32Y Arachis hypogaea HOM05D006297 ORTHO05D007873 2.4e-28 131.0 112 67.0
arahy.Tifrunner.gnm1.ann1.2MBI16 Arachis hypogaea HOM05D006297 ORTHO05D007873 2.4e-28 131.0 112 67.0
arahy.Tifrunner.gnm1.ann1.NT76K4 Arachis hypogaea HOM05D006297 ORTHO05D007873 3.1e-28 130.6 492 34.3
Medtr2g097710 Medicago truncatula HOM05D006297 ORTHO05D007873 4.0e-28 130.2 285 38.9
AT3G46750 Arabidopsis thaliana HOM05D006297 ORTHO05D007873 9.0e-28 129.0 421 33.7
Ca_01304_v3 Cicer arietinum L. HOM05D006297 ORTHO05D007873 9.0e-28 129.0 220 43.6
BcaB05g23510 Brassica carinata HOM05D006297 ORTHO05D007873 1.2e-27 128.6 409 30.1
BolC1t03251H Brassica oleracea HOM05D000026 ORTHO05D007873 1.5e-27 128.3 365 33.2
unitig_899.g15423 Utricularia gibba HOM05D006297 ORTHO05D007873 1.5e-27 128.3 300 35.7
arahy.Tifrunner.gnm1.ann1.FG1CRE Arachis hypogaea HOM05D006297 ORTHO05D007873 2.6e-27 127.5 492 33.7
BcaC09g49771 Brassica carinata HOM05D006297 ORTHO05D007873 2.6e-27 127.5 423 30.7
Lalb_Chr24g0397191 Lupinus albus HOM05D006297 ORTHO05D007873 4.9e-26 123.2 159 49.7
AUR62001745 Chenopodium quinoa HOM05D006297 ORTHO05D007873 8.4e-26 122.5 444 32.2
Nitab4.5_0023946g0010 Nicotiana tabacum HOM05D006297 ORTHO05D007873 1.4e-25 121.7 487 28.7
AUR62020026 Chenopodium quinoa HOM05D006297 ORTHO05D007873 1.1e-22 112.1 418 30.4
Dinv17042 Davidia involucrata HOM05D006297 ORTHO05D007873 1.1e-22 112.1 123 53.7
Dinv43112 Davidia involucrata HOM05D006297 ORTHO05D007873 1.1e-22 112.1 123 53.7
Duzib170G0989 Durio zibethinus HOM05D006297 ORTHO05D007873 1.1e-22 112.1 340 33.5
FAN11G1892 Fragaria x ananassa HOM05D006297 ORTHO05D007873 1.9e-22 111.3 590 29.3
Hma1.2p1_0757F.1_g213410 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 1.9e-22 111.3 111 59.5
Phvul.L008043 Phaseolus vulgaris HOM05D006297 ORTHO05D007873 1.9e-22 111.3 230 41.7
DCAR_018924 Daucus carota HOM05D006297 ORTHO05D007873 2.5e-22 110.9 409 31.5
FAN16G1466 Fragaria x ananassa HOM05D006297 ORTHO05D007873 1.6e-21 108.2 562 29.2
Gohir.D07G104500 Gossypium hirsutum HOM05D006297 ORTHO05D007873 6.2e-21 106.3 388 29.9
VMungo1080G0409 Vigna mungo HOM05D006297 ORTHO05D007873 1.4e-20 105.1 438 32.0
TPR.G6873 Trifolium pratense HOM05D006297 ORTHO05D007873 2.4e-20 104.4 281 34.5
Nn2g11187 Nelumbo nucifera HOM05D006297 ORTHO05D007873 9.0e-20 102.4 260 34.6
ATR0559G346 Amborella trichopoda HOM05D006297 ORTHO05D007873 2.6e-19 100.9 329 29.8
FAN21G2693 Fragaria x ananassa HOM05D006297 ORTHO05D007873 7.6e-19 99.4 585 27.5
Lsat_1_v5_gn_8_72960 Lactuca sativa HOM05D006297 ORTHO05D007873 2.2e-18 97.8 376 28.5
CiPaw.14G065800 Carya illinoinensis HOM05D006297 ORTHO05D007873 3.8e-18 97.1 458 28.4
SalBow6G6944 Salvia bowleyana HOM05D006297 ORTHO05D007873 7.1e-17 92.8 541 25.1
FAN25G2608 Fragaria x ananassa HOM05D006297 ORTHO05D007873 9.3e-17 92.4 584 28.1
C01p33140 Brassica napus HOM05D006297 ORTHO05D007873 1.6e-16 91.7 248 34.7
Hund04923 Selenicereus undatus HOM05D006297 ORTHO05D007873 1.0e-15 89.0 367 29.2
PSO513G0159 Papaver somniferum HOM05D006297 ORTHO05D007873 3.9e-15 87.0 479 28.8
Dinv17043 Davidia involucrata HOM05D006297 ORTHO05D007873 4.3e-14 83.6 131 45.0
Dinv43111 Davidia involucrata HOM05D006297 ORTHO05D007873 4.3e-14 83.6 131 45.0
BcaB02g10710 Brassica carinata HOM05D006297 ORTHO05D007873 2.8e-13 80.9 242 33.5
PSO339G0783 Papaver somniferum HOM05D006297 ORTHO05D007873 2.8e-13 80.9 479 28.0
Dinv42987 Davidia involucrata HOM05D006297 ORTHO05D007873 1.4e-12 78.6 437 26.1
MBI14_g08019_MAGBIO Magnolia biondii HOM05D006297 ORTHO05D007873 1.4e-12 78.6 335 28.4
SalBow1G2607 Salvia bowleyana HOM05D006297 ORTHO05D007873 3.1e-12 77.4 79 55.7
HanXRQChr05g0135261 Helianthus annuus HOM05D006297 ORTHO05D007873 3.8e-10 70.5 384 26.3
QL10p066115 Quercus lobata HOM05D006297 ORTHO05D017888 8.4e-10 69.3 74 52.7
CDE07G0208 Ceratophyllum demersum HOM05D006297 ORTHO05D007873 1.9e-09 68.2 95 45.3
EL10Ac7g16061 Beta vulgaris HOM05D006297 ORTHO05D007873 2.5e-09 67.8 412 27.2
QL10p061553 Quercus lobata HOM05D006297 ORTHO05D007873 5.5e-09 66.6 69 53.6
Ah.08g219890 Amaranthus hybridus HOM05D006297 ORTHO05D007873 1.0e-07 62.4 122 39.3
Lsat_1_v5_gn_5_169521 Lactuca sativa HOM05D006297 ORTHO05D007873 1.3e-07 62.0 67 52.2
HanXRQChr11g0340671 Helianthus annuus HOM05D006297 ORTHO05D007873 2.3e-07 61.2 124 33.9


User provided reference genes

Program Settings