Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G0579 Cannabis sativa HOM05D007729 ORTHO05D009724 0.0e+00 1149.4 579 100.0
RcHm_v2.0_Chr3g0456781 Rosa chinensis HOM05D007729 ORTHO05D009724 3.7e-175 619.0 541 62.5
FAN14G4369 Fragaria x ananassa HOM05D007729 ORTHO05D009724 1.5e-173 613.6 559 61.0
FAN05G4184 Fragaria x ananassa HOM05D007729 ORTHO05D009724 2.0e-173 613.2 551 61.5
FvH4_6g07160 Fragaria vesca HOM05D007729 ORTHO05D009724 3.8e-172 609.0 508 64.4
FAN09G4655 Fragaria x ananassa HOM05D007729 ORTHO05D009724 2.3e-169 599.7 551 60.8
QL03p018088 Quercus lobata HOM05D007729 ORTHO05D009724 1.3e-167 594.0 569 58.3
Ciclev10000704m.g Citrus clementina HOM05D007729 ORTHO05D009724 9.4e-163 577.8 555 55.5
GSVIVG01031211001 Vitis vinifera HOM05D007729 ORTHO05D009724 1.2e-157 560.8 561 54.5
Atru.chr2.143 Acer truncatum HOM05D007729 ORTHO05D009724 2.1e-154 550.1 564 55.9
Dinv24421 Davidia involucrata HOM05D007729 ORTHO05D009724 2.1e-154 550.1 553 54.6
Manes.09G175100 Manihot esculenta HOM05D007729 ORTHO05D009724 6.8e-153 545.0 562 56.0
TAR365G0479 Trochodendron aralioides HOM05D007729 ORTHO05D009724 8.8e-153 544.7 556 55.8
Hma1.2p1_1320F.1_g275420 Hydrangea macrophylla HOM05D007729 ORTHO05D009724 2.4e-150 536.6 505 57.4
Thecc.05G320400 Theobroma cacao HOM05D007729 ORTHO05D009724 5.4e-150 535.4 551 53.9
Cpa.g.sc48.137 Carica papaya HOM05D007729 ORTHO05D009724 9.1e-150 534.6 549 55.4
Potri.005G020100 Populus trichocarpa HOM05D007729 ORTHO05D009724 1.5e-147 527.3 540 54.4
Nn4g25665 Nelumbo nucifera HOM05D007729 ORTHO05D009724 1.9e-147 526.9 558 53.0
Actinidia16844 Actinidia chinensis HOM05D007729 ORTHO05D009724 4.7e-146 522.3 575 52.7
THA.LOC104805912 Tarenaya hassleriana HOM05D007729 ORTHO05D009724 3.4e-144 516.2 554 53.2
Sabra05G0026100 Salix brachista HOM05D005361 ORTHO05D006518 5.7e-144 515.4 535 53.6
Duzib177G0448 Durio zibethinus HOM05D007729 ORTHO05D009724 1.3e-143 514.2 576 51.4
COL.COLO4_04132 Corchorus olitorius HOM05D007729 ORTHO05D009724 1.7e-143 513.8 543 51.6
A08p34750 Brassica napus HOM05D007729 ORTHO05D009724 2.2e-143 513.5 556 52.5
C08p12530 Brassica napus HOM05D007729 ORTHO05D009724 2.2e-143 513.5 549 52.8
Gorai.013G128200 Gossypium raimondii HOM05D007729 ORTHO05D009724 2.2e-143 513.5 551 53.2
AL1G19670 Arabidopsis lyrata HOM05D007729 ORTHO05D009724 1.1e-142 511.1 551 53.0
Gohir.D13G114300 Gossypium hirsutum HOM05D007729 ORTHO05D009724 1.1e-142 511.1 549 52.8
BraA08t35386Z Brassica rapa HOM05D007729 ORTHO05D009724 4.1e-142 509.2 547 53.0
HanXRQChr09g0268291 Helianthus annuus HOM05D007729 ORTHO05D009724 4.1e-142 509.2 547 51.9
BolC8t48891H Brassica oleracea HOM05D007729 ORTHO05D009724 1.2e-141 507.7 544 53.5
Carub.0001s0852 Capsella rubella HOM05D007729 ORTHO05D009724 2.7e-141 506.5 549 52.8
Lj9A208G24 Lonicera japonica HOM05D007729 ORTHO05D009724 2.7e-141 506.5 534 53.6
PSO761G0658 Papaver somniferum HOM05D007729 ORTHO05D009724 1.7e-140 503.8 564 52.8
Sp1g07780 Schrenkiella parvula HOM05D007729 ORTHO05D009724 2.3e-140 503.4 549 51.7
Gohir.A13G111500 Gossypium hirsutum HOM05D007729 ORTHO05D009724 2.9e-140 503.1 549 51.7
Haze_04087 Corylus avellana HOM05D007729 ORTHO05D009724 2.1e-138 496.9 509 55.8
Lalb_Chr02g0147931 Lupinus albus HOM05D007729 ORTHO05D009724 2.1e-138 496.9 540 53.1
PGR031G2787 Punica granatum HOM05D007729 ORTHO05D009724 4.7e-138 495.7 557 51.2
AT1G09195 Arabidopsis thaliana HOM05D007729 ORTHO05D009724 6.1e-138 495.4 513 55.4
Thhalv10007209m.g Eutrema salsugineum HOM05D007729 ORTHO05D009724 6.8e-137 491.9 588 49.3
Aa31LG1G6090 Aethionema arabicum HOM05D007729 ORTHO05D009724 1.2e-136 491.1 542 51.5
Lsat_1_v5_gn_7_73440 Lactuca sativa HOM05D007729 ORTHO05D009724 2.0e-136 490.3 561 49.7
Nitab4.5_0000368g0330 Nicotiana tabacum HOM05D007729 ORTHO05D009724 2.0e-136 490.3 554 50.7
TWI56G1038 Tripterygium wilfordii HOM05D007729 ORTHO05D009724 4.4e-136 489.2 541 50.3
PSO210G3025 Papaver somniferum HOM05D007729 ORTHO05D009724 6.4e-135 485.3 555 52.3
Peaxi162Scf00673g00025 Petunia axillaris HOM05D007729 ORTHO05D009724 9.2e-134 481.5 546 49.6
Oeu053698.1 Olea europaea HOM05D007729 ORTHO05D009724 1.2e-133 481.1 517 53.4
MSTRG.20396 Avicennia marina HOM05D007729 ORTHO05D009724 3.5e-133 479.6 572 50.5
SalBow7G3736 Salvia bowleyana HOM05D007729 ORTHO05D009724 7.8e-133 478.4 561 50.1
PGSC0003DMG400024735 Solanum tuberosum HOM05D007729 ORTHO05D009724 1.3e-132 477.6 568 48.6
Solyc01g100260.4 Solanum lycopersicum HOM05D007729 ORTHO05D009724 5.0e-132 475.7 571 48.7
vmacro01545 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 5.0e-132 475.7 512 53.1
CSS0040240 Camellia sinensis var. sinensis HOM05D007729 ORTHO05D009724 1.1e-131 474.6 591 48.7
ECA236G3528 Erigeron canadensis HOM05D007729 ORTHO05D009724 3.3e-131 473.0 541 50.3
Sopen01g043770 Solanum pennellii HOM05D007729 ORTHO05D009724 2.1e-130 470.3 571 48.3
Cc02_g34750 Coffea canephora HOM05D007729 ORTHO05D009724 3.6e-130 469.5 550 48.4
Nitab4.5_0006072g0050 Nicotiana tabacum HOM05D007729 ORTHO05D009724 4.7e-130 469.2 591 46.9
MBI18_g24956_MAGBIO Magnolia biondii HOM05D007729 ORTHO05D009724 6.2e-130 468.8 571 48.3
Prupe.6G315600 Prunus persica HOM05D007729 ORTHO05D009724 4.0e-129 466.1 383 64.8
Migut.B00991 Erythranthe guttata HOM05D007729 ORTHO05D009724 2.0e-128 463.8 565 48.1
CAN.G1273.5 Capsicum annuum HOM05D007729 ORTHO05D009724 2.6e-128 463.4 567 46.7
DCAR_021068 Daucus carota HOM05D007729 ORTHO05D009724 4.4e-128 462.6 554 49.8
DCAR_021070 Daucus carota HOM05D007729 ORTHO05D009724 4.4e-128 462.6 554 49.8
EL10Ac4g09861 Beta vulgaris HOM05D007729 ORTHO05D009724 7.5e-128 461.8 526 50.0
BcaC07g38483 Brassica carinata HOM05D007729 ORTHO05D009724 4.6e-125 452.6 545 49.9
AUR62000694 Chenopodium quinoa HOM05D007729 ORTHO05D009724 1.2e-117 427.9 535 45.8
SGA_v2.0_scaffold53G19323 Striga asiatica HOM05D007729 ORTHO05D009724 8.6e-116 421.8 449 50.3
CDE12G0453 Ceratophyllum demersum HOM05D007729 ORTHO05D009724 5.6e-115 419.1 537 44.7
ATR0706G084 Amborella trichopoda HOM05D007729 ORTHO05D009724 3.2e-110 403.3 562 42.9
AUR62005264 Chenopodium quinoa HOM05D007729 ORTHO05D009724 1.1e-105 388.3 559 43.3
Aqoxy2G02816 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 9.6e-99 365.2 371 54.7
CARHR009150 Cardamine hirsuta HOM05D007729 ORTHO05D009724 6.2e-98 362.5 375 55.7
SEGI_22290 Sequoiadendron giganteum HOM05D007729 ORTHO05D009724 4.0e-97 359.8 562 39.3
Pp3c5_5230 Physcomitrium patens HOM05D007729 ORTHO05D009724 2.0e-96 357.5 560 38.9
Pp3c6_24770 Physcomitrium patens HOM05D007729 ORTHO05D009724 4.9e-95 352.8 561 39.6
Atru.chr2.136 Acer truncatum HOM05D007729 ORTHO05D009724 2.3e-92 344.0 303 63.0
vmacro05864 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 1.3e-87 328.2 366 52.7
Hund21744 Selenicereus undatus HOM05D007729 ORTHO05D009724 4.6e-85 319.7 490 41.4
Sc16g0008910 Simmondsia chinensis HOM05D007729 ORTHO05D009724 6.0e-85 319.3 388 50.0
Duzib147G0321 Durio zibethinus HOM05D007729 ORTHO05D009724 6.7e-84 315.8 373 49.3
Pp3c27_4900 Physcomitrium patens HOM05D007729 ORTHO05D009724 1.1e-83 315.1 562 36.3
vmacro20072 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 5.7e-75 286.2 366 48.9
PRCOL_00006313 Prasinoderma coloniale HOM05D007729 ORTHO05D009724 2.8e-66 257.3 564 34.2
Haze_25193 Corylus avellana HOM05D007729 ORTHO05D009724 1.4e-41 175.3 195 51.3
CARHR009140 Cardamine hirsuta HOM05D007729 ORTHO05D009724 4.7e-37 160.2 177 51.4
Aqoxy2G02815 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 4.1e-33 147.1 156 51.3
Haze_15474 Corylus avellana HOM05D000683 ORTHO05D000507 3.8e-31 140.6 124 58.1
MD12G1208200 Malus domestica HOM05D007729 ORTHO05D009724 1.3e-26 125.6 120 54.2
Haze_25604 Corylus avellana HOM05D007729 ORTHO05D009724 4.7e-21 107.1 130 46.9
PGSC0003DMG400033855 Solanum tuberosum HOM05D007729 ORTHO05D009724 2.5e-06 58.2 76 40.8


User provided reference genes

Program Settings