Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G0520 Cannabis sativa HOM05D000780 ORTHO05D009033 1.1e-157 560.1 301 100.0
MD12G1251900 Malus domestica HOM05D000780 ORTHO05D009033 7.4e-95 351.3 307 65.8
FvH4_6g01461 Fragaria vesca HOM05D000780 ORTHO05D009033 1.6e-92 343.6 304 64.8
Ciclev10021307m.g Citrus clementina HOM05D000780 ORTHO05D009033 5.9e-92 341.7 317 62.5
Thecc.05G266300 Theobroma cacao HOM05D000780 ORTHO05D009033 3.8e-91 339.0 321 60.7
Atru.chr2.1117 Acer truncatum HOM05D000780 ORTHO05D009033 5.0e-91 338.6 305 62.3
RcHm_v2.0_Chr3g0449091 Rosa chinensis HOM05D000780 ORTHO05D009033 7.2e-90 334.7 304 63.2
Glyma.20G221500 Glycine max HOM05D000780 ORTHO05D009033 2.7e-89 332.8 307 62.5
Gohir.A13G161800 Gossypium hirsutum HOM05D000780 ORTHO05D009033 4.7e-89 332.0 309 61.8
CsaV3_1G045040 Cucumis sativus L. HOM05D000780 ORTHO05D009033 3.0e-88 329.3 298 62.1
Gohir.D13G172200 Gossypium hirsutum HOM05D000780 ORTHO05D009033 4.0e-88 328.9 309 61.5
GSVIVG01026324001 Vitis vinifera HOM05D000780 ORTHO05D009033 8.8e-88 327.8 307 63.2
Gorai.013G188500 Gossypium raimondii HOM05D000780 ORTHO05D009033 2.6e-87 326.2 309 61.5
TAR633G0111 Trochodendron aralioides HOM05D000780 ORTHO05D009033 3.3e-87 325.9 295 63.4
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 7.5e-87 324.7 323 58.8
Ca_09986_v3 Cicer arietinum L. HOM05D000780 ORTHO05D009033 1.7e-86 323.6 263 67.7
Phvul.L002032 Phaseolus vulgaris HOM05D000780 ORTHO05D009033 1.7e-86 323.6 303 60.4
Potri.019G023700 Populus trichocarpa HOM05D000780 ORTHO05D009033 2.8e-86 322.8 307 62.2
Lj5g0019051 Lotus japonicus HOM05D000780 ORTHO05D009033 4.8e-86 322.0 259 67.6
Nn1g03021 Nelumbo nucifera HOM05D000780 ORTHO05D009033 8.2e-86 321.2 305 63.6
arahy.Tifrunner.gnm1.ann1.09X96J Arachis hypogaea HOM05D000780 ORTHO05D009033 1.1e-85 320.9 310 60.3
VMungo0720G1285 Vigna mungo HOM05D000780 ORTHO05D009033 1.1e-85 320.9 316 58.9
arahy.Tifrunner.gnm1.ann1.ZAXM00 Arachis hypogaea HOM05D000780 ORTHO05D009033 1.4e-85 320.5 307 60.3
CSS0005756 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 4.1e-85 318.9 307 61.2
TWI34G1716 Tripterygium wilfordii HOM05D000780 ORTHO05D009033 7.0e-85 318.2 306 59.2
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 9.1e-85 317.8 264 65.9
QL01p042200 Quercus lobata HOM05D000780 ORTHO05D009033 9.1e-85 317.8 325 60.6
Medtr1g079763 Medicago truncatula HOM05D000780 ORTHO05D009033 1.2e-84 317.4 261 66.3
Hma1.2p1_0130F.1_g060510 Hydrangea macrophylla HOM05D000780 ORTHO05D009033 2.0e-84 316.6 312 58.7
THA.LOC104821566 Tarenaya hassleriana HOM05D000780 ORTHO05D009033 3.5e-84 315.8 275 63.6
Lalb_Chr21g0311301 Lupinus albus HOM05D000780 ORTHO05D009033 5.9e-84 315.1 305 59.7
PGR004G1412 Punica granatum HOM05D000780 ORTHO05D009033 1.3e-83 313.9 304 59.5
EL10Ac4g09771 Beta vulgaris HOM05D000780 ORTHO05D009033 2.2e-83 313.2 259 64.9
Thhalv10027857m.g Eutrema salsugineum HOM05D000780 ORTHO05D009033 2.2e-83 313.2 270 63.0
BcaC02g09559 Brassica carinata HOM05D000780 ORTHO05D009033 2.9e-83 312.8 293 58.7
BolC4t25992H Brassica oleracea HOM05D000780 ORTHO05D009033 2.9e-83 312.8 293 58.7
Actinidia06831 Actinidia chinensis HOM05D000780 ORTHO05D009033 3.8e-83 312.4 305 62.0
C04p44170 Brassica napus HOM05D000780 ORTHO05D009033 3.8e-83 312.4 293 58.7
Manes.09G146600 Manihot esculenta HOM05D000780 ORTHO05D009033 3.8e-83 312.4 296 60.8
BraA04t16719Z Brassica rapa HOM05D000780 ORTHO05D009033 1.1e-82 310.8 258 64.7
Carub.0007s3248 Capsella rubella HOM05D000780 ORTHO05D009033 1.9e-82 310.1 306 57.5
Sc24g0002520 Simmondsia chinensis HOM05D000780 ORTHO05D009033 4.2e-82 308.9 256 66.4
Aqoxy5G00106 Aquilegia oxysepala HOM05D000780 ORTHO05D009033 5.5e-82 308.5 306 58.8
Sp7g05110 Schrenkiella parvula HOM05D000780 ORTHO05D009033 9.4e-82 307.8 270 61.1
A04p10530 Brassica napus HOM05D000780 ORTHO05D009033 2.1e-81 306.6 295 58.6
ClCG03G011490 Citrullus lanatus HOM05D000780 ORTHO05D009033 6.1e-81 305.1 266 64.7
AL7G45990 Arabidopsis lyrata HOM05D000780 ORTHO05D009033 1.4e-80 303.9 319 55.8
Ah.06g187930 Amaranthus hybridus HOM05D000780 ORTHO05D009033 1.8e-80 303.5 263 62.7
Eucgr.H04210 Eucalyptus grandis HOM05D000780 ORTHO05D009033 2.3e-80 303.1 305 59.3
AUR62006989 Chenopodium quinoa HOM05D000780 ORTHO05D009033 3.0e-80 302.8 262 62.6
AT5G37360 Arabidopsis thaliana HOM05D000780 ORTHO05D009033 6.8e-80 301.6 310 56.5
CARHR215730 Cardamine hirsuta HOM05D000780 ORTHO05D009033 6.3e-78 295.0 260 61.9
Solyc04g050470.4 Solanum lycopersicum HOM05D000780 ORTHO05D009033 1.1e-77 294.3 256 62.5
Prupe.6G353000 Prunus persica HOM05D000780 ORTHO05D009033 1.8e-77 293.5 304 59.9
MSTRG.27431 Avicennia marina HOM05D000780 ORTHO05D009033 3.1e-77 292.7 257 63.0
Rhsim05G0170400 Rhododendron simsii HOM05D000780 ORTHO05D009033 2.0e-76 290.0 301 57.8
Lsat_1_v5_gn_9_46781 Lactuca sativa HOM05D000780 ORTHO05D009033 2.7e-76 289.7 259 61.8
Migut.F02052 Erythranthe guttata HOM05D000780 ORTHO05D009033 3.5e-76 289.3 314 55.7
Nitab4.5_0003148g0030 Nicotiana tabacum HOM05D000780 ORTHO05D009033 3.5e-76 289.3 263 60.5
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 1.3e-75 287.3 214 71.0
FAN05G0905 Fragaria x ananassa HOM05D000780 ORTHO05D001132 1.3e-75 287.3 317 55.8
MELO3C010086.2 Cucumis melo HOM05D000780 ORTHO05D009033 2.3e-75 286.6 236 65.7
FAN14G4937 Fragaria x ananassa HOM05D000780 ORTHO05D001132 2.9e-75 286.2 317 55.2
FAN14G3828 Fragaria x ananassa HOM05D000780 ORTHO05D001132 6.6e-75 285.0 317 55.2
Hund07171 Selenicereus undatus HOM05D000780 ORTHO05D009033 8.6e-75 284.6 300 58.3
DCAR_030971 Daucus carota HOM05D000780 ORTHO05D009033 1.6e-73 280.4 318 55.7
PSO210G3904 Papaver somniferum HOM05D000780 ORTHO05D009033 4.7e-73 278.9 280 56.4
Potri.013G050300 Populus trichocarpa HOM05D000780 ORTHO05D009033 4.7e-73 278.9 270 58.9
SalBow1G6873 Salvia bowleyana HOM05D000780 ORTHO05D009033 6.1e-73 278.5 319 53.6
Aa31LG9G18020 Aethionema arabicum HOM05D000780 ORTHO05D009033 8.0e-73 278.1 253 60.5
Glyma.10G167600 Glycine max HOM05D000780 ORTHO05D009033 1.4e-72 277.3 332 51.8
FAN02G1432 Fragaria x ananassa HOM05D000780 ORTHO05D009033 5.2e-72 275.4 306 54.6
ATR0088G058 Amborella trichopoda HOM05D000780 ORTHO05D009033 8.9e-72 274.6 249 61.4
MBI10_g26046_MAGBIO Magnolia biondii HOM05D000780 ORTHO05D009033 1.5e-71 273.9 290 56.6
vmacro19978 Vaccinium macrocarpon HOM05D000780 ORTHO05D009033 9.8e-71 271.2 299 55.2
ECA232G3479 Erigeron canadensis HOM05D000780 ORTHO05D009033 1.1e-69 267.7 250 60.0
Nitab4.5_0000841g0080 Nicotiana tabacum HOM05D000780 ORTHO05D009033 1.4e-69 267.3 256 58.6
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 2.4e-69 266.5 229 63.8
Dinv01155 Davidia involucrata HOM05D000780 ORTHO05D009033 1.0e-67 261.2 194 71.1
Cpa.g.c33516 Carica papaya HOM05D000780 ORTHO05D009033 1.3e-67 260.8 188 73.4
SalBow1G5981 Salvia bowleyana HOM05D000780 ORTHO05D009033 2.9e-67 259.6 349 48.7
Haze_04472 Corylus avellana HOM05D000780 ORTHO05D009033 1.1e-66 257.7 306 55.9
unitig_37.g12284 Utricularia gibba HOM05D000780 ORTHO05D009033 1.2e-65 254.2 253 58.9
SGA_v2.0_scaffold329G48830 Striga asiatica HOM05D002740 ORTHO05D003126 2.1e-65 253.4 341 46.3
Sabra19G0033700 Salix brachista HOM05D000780 ORTHO05D009033 4.0e-64 249.2 295 54.9
Os02g0815400 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D009033 4.4e-63 245.7 235 58.3
TPR.G10273 Trifolium pratense HOM05D000780 ORTHO05D009033 1.1e-61 241.1 318 49.4
Peaxi162Scf00077g00138 Petunia axillaris HOM05D000780 ORTHO05D009033 7.0e-61 238.4 207 64.7
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 3.9e-59 232.6 228 59.2
HanXRQChr05g0145151 Helianthus annuus HOM05D000780 ORTHO05D009033 5.0e-59 232.3 252 54.0
CSS0024577 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 2.1e-57 226.9 242 59.1
Zm00001eb258750 Zea mays HOM05D000780 ORTHO05D009033 3.6e-57 226.1 241 52.7
CiPaw.07G074400 Carya illinoinensis HOM05D000780 ORTHO05D009033 2.9e-54 216.5 192 65.6
Sed0013634 Sechium edule HOM05D000780 ORTHO05D009033 7.0e-53 211.8 270 50.7
Lj2A46G68 Lonicera japonica HOM05D000780 ORTHO05D009033 1.9e-50 203.8 149 71.1
Eucgr.H04100 Eucalyptus grandis HOM05D000780 ORTHO05D009033 5.6e-50 202.2 205 57.1
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 7.3e-50 201.8 293 45.7
AagrBONN_evm.TU.Sc2ySwM_228.3981 Anthoceros agrestis HOM05D000780 ORTHO05D009033 1.4e-40 171.0 247 39.7
Sopen04g021250 Solanum pennellii HOM05D000780 ORTHO05D009033 4.0e-40 169.5 135 65.9
SMO172G0144 Selaginella moellendorffii HOM05D000780 ORTHO05D009033 5.2e-40 169.1 215 46.5
MD12G1251000 Malus domestica HOM05D000072 ORTHO05D009033 6.4e-38 162.2 193 52.8
FAN09G0636 Fragaria x ananassa HOM05D000780 ORTHO05D001132 1.6e-36 157.5 115 70.4
Cc09_g03030 Coffea canephora HOM05D000780 ORTHO05D009033 4.6e-36 156.0 120 69.2
Pp3c18_1300 Physcomitrium patens HOM05D000780 ORTHO05D009033 8.7e-35 151.8 328 35.4
PGSC0003DMG402028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 9.0e-32 141.7 120 62.5
FAN11G0130 Fragaria x ananassa HOM05D000780 ORTHO05D009033 3.4e-31 139.8 220 44.5
SEGI_05244 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 2.4e-29 133.7 117 58.1
HPP92_009057 Vanilla planifolia HOM05D000780 ORTHO05D009033 4.2e-29 132.9 121 59.5
MD12G1250900 Malus domestica HOM05D000780 ORTHO05D009033 1.2e-28 131.3 158 52.5
CBR_g11120 Chara braunii HOM05D000780 ORTHO05D009033 3.5e-28 129.8 240 36.2
HPP92_009056 Vanilla planifolia HOM05D001254 ORTHO05D001386 2.0e-23 114.0 194 40.2
SEGI_21696 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 3.8e-22 109.8 130 49.2
Cc09_g03040 Coffea canephora HOM05D000780 ORTHO05D009033 1.4e-21 107.8 111 54.1
Eucgr.H04102 Eucalyptus grandis HOM05D000780 ORTHO05D009033 3.0e-19 100.1 195 37.4
PGSC0003DMG401028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 6.7e-11 72.4 71 57.7
FAN05G5022 Fragaria x ananassa HOM05D000780 ORTHO05D009033 1.9e-10 70.9 95 48.4
CAN.G4.37 Capsicum annuum HOM05D000780 ORTHO05D009033 2.5e-10 70.5 71 56.3
FvH4_3g18300 Fragaria vesca HOM05D000780 ORTHO05D196851 9.6e-10 68.6 50 66.0
FAN14G1321 Fragaria x ananassa HOM05D000780 ORTHO05D009033 2.1e-09 67.4 117 41.0
FAN21G2408 Fragaria x ananassa HOM05D000780 ORTHO05D009033 5.8e-07 59.3 47 68.1
FAN16G0199 Fragaria x ananassa HOM05D000780 ORTHO05D210745 6.5e-06 55.8 55 50.9


User provided reference genes

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