Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G0497 Cannabis sativa HOM05D006634 ORTHO05D008282 3.7e-59 231.5 128 100.0
CANSAT54G1359 Cannabis sativa HOM05D006634 ORTHO05D008282 1.8e-58 229.2 128 99.2
CANSAT54G1657 Cannabis sativa HOM05D006634 ORTHO05D008282 1.8e-58 229.2 128 99.2
CANSAT54G2640 Cannabis sativa HOM05D006634 ORTHO05D008282 1.2e-41 173.3 87 100.0
CANSAT54G2841 Cannabis sativa HOM05D006634 ORTHO05D008282 1.2e-41 173.3 87 100.0
CANSAT54G0287 Cannabis sativa HOM05D006634 ORTHO05D008282 1.1e-39 166.8 87 98.9
CANSAT54G1094 Cannabis sativa HOM05D006634 ORTHO05D008282 1.1e-39 166.8 87 98.9
CANSAT54G1506 Cannabis sativa HOM05D006634 ORTHO05D008282 1.4e-39 166.4 87 96.6
CiPaw.13G113000 Carya illinoinensis HOM05D006634 ORTHO05D008282 1.3e-27 126.7 87 73.6
RcHm_v2.0_Chr5g0059081 Rosa chinensis HOM05D006634 ORTHO05D008282 2.6e-25 119.0 87 71.3
CSS0041274 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 3.5e-25 118.6 87 69.0
Prupe.6G101400 Prunus persica HOM05D006634 ORTHO05D008282 1.0e-24 117.1 87 69.0
MD03G1117700 Malus domestica HOM05D006634 ORTHO05D008282 1.3e-24 116.7 87 69.0
GSVIVG01025186001 Vitis vinifera HOM05D006634 ORTHO05D008282 1.7e-24 116.3 87 69.0
Dinv32744 Davidia involucrata HOM05D006634 ORTHO05D008282 2.2e-24 115.9 87 69.0
Lj3g0007397 Lotus japonicus HOM05D006634 ORTHO05D008282 3.8e-24 115.2 87 70.1
CSS0031934 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 1.9e-23 112.8 87 69.0
FAN21G3892 Fragaria x ananassa HOM05D006634 ORTHO05D008282 2.5e-23 112.5 87 63.2
MD11G1136000 Malus domestica HOM05D006634 ORTHO05D008282 2.5e-23 112.5 87 66.7
TWI79G0418 Tripterygium wilfordii HOM05D006634 ORTHO05D008282 2.5e-23 112.5 87 64.4
Gohir.A05G103000 Gossypium hirsutum HOM05D006634 ORTHO05D008282 4.2e-23 111.7 87 66.7
Gorai.009G107000 Gossypium raimondii HOM05D006634 ORTHO05D008282 5.5e-23 111.3 87 66.7
Glyma.11G146700 Glycine max HOM05D006634 ORTHO05D008282 7.2e-23 110.9 87 65.5
Hma1.2p1_0058F.1_g032540 Hydrangea macrophylla HOM05D006634 ORTHO05D008282 7.2e-23 110.9 87 64.4
Glyma.12G067600 Glycine max HOM05D006634 ORTHO05D008282 1.2e-22 110.2 86 64.0
Gohir.D05G102700 Gossypium hirsutum HOM05D006634 ORTHO05D008282 1.2e-22 110.2 87 66.7
PGR102G2188 Punica granatum HOM05D006634 ORTHO05D008282 1.6e-22 109.8 87 63.2
Lalb_Chr19g0137281 Lupinus albus HOM05D006634 ORTHO05D008282 2.1e-22 109.4 87 63.2
Atru.chr3.3630 Acer truncatum HOM05D006634 ORTHO05D008282 3.6e-22 108.6 87 64.4
FvH4_3g32290 Fragaria vesca HOM05D006634 ORTHO05D008282 3.6e-22 108.6 87 62.1
FAN11G2087 Fragaria x ananassa HOM05D006634 ORTHO05D008282 3.6e-22 108.6 87 62.1
SalBow3G1265 Salvia bowleyana HOM05D006634 ORTHO05D008282 3.6e-22 108.6 87 65.5
THA.LOC104826362 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 3.6e-22 108.6 85 68.2
TPR.G15540 Trifolium pratense HOM05D006634 ORTHO05D008282 4.7e-22 108.2 87 65.5
Oeu002870.2 Olea europaea HOM05D006634 ORTHO05D008282 8.0e-22 107.5 88 62.5
Eucgr.B02497 Eucalyptus grandis HOM05D006634 ORTHO05D008282 1.4e-21 106.7 98 57.1
CDE06G1545 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 1.8e-21 106.3 87 64.4
Duzib168G0710 Durio zibethinus HOM05D006634 ORTHO05D008282 1.8e-21 106.3 87 64.4
Ciclev10029701m.g Citrus clementina HOM05D006634 ORTHO05D008282 2.3e-21 105.9 87 64.4
Nn2g10789 Nelumbo nucifera HOM05D006634 ORTHO05D008282 2.3e-21 105.9 87 65.5
Medtr4g459450 Medicago truncatula HOM05D006634 ORTHO05D008282 3.0e-21 105.5 87 64.4
Psat7g225160 Pisum sativum HOM05D006634 ORTHO05D008282 3.0e-21 105.5 87 63.2
Thecc.09G340600 Theobroma cacao HOM05D006634 ORTHO05D008282 3.0e-21 105.5 81 66.7
FAN25G2760 Fragaria x ananassa HOM05D006634 ORTHO05D008282 4.0e-21 105.1 88 56.8
CsaV3_1G033740 Cucumis sativus L. HOM05D006634 ORTHO05D008282 6.7e-21 104.4 87 57.5
Phvul.011G079100 Phaseolus vulgaris HOM05D006634 ORTHO05D008282 6.7e-21 104.4 87 62.1
Sed0017465 Sechium edule HOM05D006634 ORTHO05D008282 6.7e-21 104.4 87 58.6
THA.LOC104800608 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 6.7e-21 104.4 87 60.9
C04p22950 Brassica napus HOM05D006634 ORTHO05D008282 8.8e-21 104.0 87 60.9
CARHR121380 Cardamine hirsuta HOM05D006634 ORTHO05D008282 8.8e-21 104.0 87 62.1
Sp4g11250 Schrenkiella parvula HOM05D006634 ORTHO05D008282 8.8e-21 104.0 87 62.1
Duzib150G1350 Durio zibethinus HOM05D006634 ORTHO05D008282 1.1e-20 103.6 87 62.1
arahy.Tifrunner.gnm1.ann1.RYN47D Arachis hypogaea HOM05D006634 ORTHO05D008282 1.5e-20 103.2 87 60.9
AL4G21590 Arabidopsis lyrata HOM05D006634 ORTHO05D008282 2.6e-20 102.4 87 60.9
MELO3C020691.2 Cucumis melo HOM05D006634 ORTHO05D008282 2.6e-20 102.4 87 57.5
Manes.11G145100 Manihot esculenta HOM05D006634 ORTHO05D008282 3.3e-20 102.1 83 62.7
Rhsim01G0216700 Rhododendron simsii HOM05D006634 ORTHO05D008282 3.3e-20 102.1 87 60.9
FAN16G1798 Fragaria x ananassa HOM05D006634 ORTHO05D008282 5.7e-20 101.3 106 50.9
arahy.Tifrunner.gnm1.ann1.8AEA4E Arachis hypogaea HOM05D006634 ORTHO05D008282 7.4e-20 100.9 91 57.1
BolC4t23789H Brassica oleracea HOM05D006634 ORTHO05D008282 7.4e-20 100.9 87 60.9
Carub.0004s0938 Capsella rubella HOM05D006634 ORTHO05D008282 7.4e-20 100.9 87 60.9
Thhalv10017488m.g Eutrema salsugineum HOM05D006634 ORTHO05D008282 7.4e-20 100.9 87 58.6
BcaNung07072 Brassica carinata HOM05D006634 ORTHO05D008282 9.7e-20 100.5 87 59.8
Sabra04G0142400 Salix brachista HOM05D006634 ORTHO05D008282 1.3e-19 100.1 83 61.4
Aa31LG5G7790 Aethionema arabicum HOM05D006634 ORTHO05D008282 1.7e-19 99.8 87 59.8
CDE07G0066 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 1.7e-19 99.8 83 63.9
HanXRQChr02g0031651 Helianthus annuus HOM05D006634 ORTHO05D008282 2.2e-19 99.4 87 63.2
AT2G28430 Arabidopsis thaliana HOM05D006634 ORTHO05D008282 2.8e-19 99.0 87 59.8
BraA07t29605Z Brassica rapa HOM05D006634 ORTHO05D008282 2.8e-19 99.0 87 59.8
Potri.004G210800 Populus trichocarpa HOM05D006634 ORTHO05D008282 2.8e-19 99.0 83 60.2
A07p19000 Brassica napus HOM05D006634 ORTHO05D008282 3.7e-19 98.6 87 59.8
DCAR_018812 Daucus carota HOM05D006634 ORTHO05D008282 4.8e-19 98.2 81 60.5
unitig_21.g20301 Utricularia gibba HOM05D006634 ORTHO05D008282 4.8e-19 98.2 87 56.3
Peaxi162Scf00270g00818 Petunia axillaris HOM05D006634 ORTHO05D008282 8.2e-19 97.4 87 59.8
Gohir.A08G197800 Gossypium hirsutum HOM05D006634 ORTHO05D008282 1.1e-18 97.1 87 57.5
Lsat_1_v5_gn_2_98520 Lactuca sativa HOM05D006634 ORTHO05D008282 1.1e-18 97.1 103 54.4
BcaB06g28214 Brassica carinata HOM05D006634 ORTHO05D008282 1.4e-18 96.7 87 58.6
Gorai.004G228800 Gossypium raimondii HOM05D006634 ORTHO05D008282 1.4e-18 96.7 87 57.5
Manes.04G021400 Manihot esculenta HOM05D006634 ORTHO05D008282 1.4e-18 96.7 83 60.2
Cpa.g.sc216.10 Carica papaya HOM05D006634 ORTHO05D008282 1.8e-18 96.3 76 64.5
ClCG03G001830 Citrullus lanatus HOM05D006634 ORTHO05D008282 2.4e-18 95.9 87 54.0
HanXRQChr14g0452861 Helianthus annuus HOM05D006634 ORTHO05D008282 2.4e-18 95.9 83 60.2
Nitab4.5_0000650g0190 Nicotiana tabacum HOM05D006634 ORTHO05D008282 4.1e-18 95.1 87 57.5
vmacro14436 Vaccinium macrocarpon HOM05D006634 ORTHO05D008282 4.1e-18 95.1 87 57.5
Actinidia03728 Actinidia chinensis HOM05D006634 ORTHO05D008282 5.3e-18 94.7 85 56.5
Gohir.D08G215200 Gossypium hirsutum HOM05D006634 ORTHO05D008282 2.0e-17 92.8 87 56.3
AUR62039638 Chenopodium quinoa HOM05D006634 ORTHO05D008282 3.5e-17 92.0 87 56.3
ECA238G2380 Erigeron canadensis HOM05D006634 ORTHO05D008282 5.9e-17 91.3 87 55.2
Sopen11g028130 Solanum pennellii HOM05D006634 ORTHO05D008282 5.9e-17 91.3 87 55.2
Solyc11g069410.2 Solanum lycopersicum HOM05D006634 ORTHO05D008282 1.0e-16 90.5 87 55.2
AUR62024980 Chenopodium quinoa HOM05D006634 ORTHO05D008282 1.3e-16 90.1 87 56.3
ECA248G3376 Erigeron canadensis HOM05D006634 ORTHO05D008282 1.3e-16 90.1 87 55.2
BolC4t27285H Brassica oleracea HOM05D006634 ORTHO05D008282 5.0e-16 88.2 83 54.2
Lalb_Chr03g0027351 Lupinus albus HOM05D006634 ORTHO05D008282 8.5e-16 87.4 82 57.3
BraA04t17721Z Brassica rapa HOM05D006634 ORTHO05D008282 5.5e-15 84.7 83 51.8
Aqoxy2G01632 Aquilegia oxysepala HOM05D006634 ORTHO05D008282 7.2e-15 84.3 87 54.0
Zm00001eb221580 Zea mays HOM05D006634 ORTHO05D008282 1.6e-14 83.2 87 52.9
QL01p022236 Quercus lobata HOM05D006634 ORTHO05D008282 4.7e-14 81.6 174 34.5
Actinidia25419 Actinidia chinensis HOM05D006634 ORTHO05D008282 2.3e-13 79.3 75 53.3
Os10g0481400 Oryza sativa ssp. japonica HOM05D006634 ORTHO05D008282 2.3e-13 79.3 91 48.4
Zm00001eb045570 Zea mays HOM05D006634 ORTHO05D008282 4.0e-13 78.6 87 50.6
Sed0015282 Sechium edule HOM05D006634 ORTHO05D008282 6.3e-11 71.2 87 44.8
Haze_23828 Corylus avellana HOM05D006634 ORTHO05D008282 1.4e-10 70.1 84 51.2
Cc01_g11130 Coffea canephora HOM05D006634 ORTHO05D008282 1.8e-10 69.7 67 50.7
MBI10_g13399_MAGBIO Magnolia biondii HOM05D006634 ORTHO05D008282 3.1e-10 68.9 45 75.6
Lj1A192T37 Lonicera japonica HOM05D006634 ORTHO05D008282 7.7e-09 64.3 41 78.0
Pp3c7_7440 Physcomitrium patens HOM05D006634 ORTHO05D008282 1.0e-08 63.9 91 38.5
SalBow3G3864 Salvia bowleyana HOM05D006634 ORTHO05D008282 1.3e-08 63.5 90 47.8
Actinidia20457 Actinidia chinensis HOM05D006634 ORTHO05D008282 6.5e-08 61.2 54 57.4
Mapoly0137s0028 Marchantia polymorpha HOM05D006634 ORTHO05D008282 6.5e-08 61.2 93 39.8
Sc06g0010190 Simmondsia chinensis HOM05D006634 ORTHO05D008282 6.5e-08 61.2 44 70.5
PGSC0003DMG400008051 Solanum tuberosum HOM05D006634 ORTHO05D008282 1.5e-07 60.1 50 60.0
SHI06100 Sapria himalayana HOM05D006634 ORTHO05D008282 3.2e-07 58.9 49 65.3
HPP92_022576 Vanilla planifolia HOM05D006634 ORTHO05D008282 2.1e-06 56.2 37 75.7
Nitab4.5_0014490g0010 Nicotiana tabacum HOM05D006634 ORTHO05D008282 4.7e-06 55.1 41 65.9
arahy.Tifrunner.gnm1.ann1.RL700P Arachis hypogaea HOM05D006503 ORTHO05D008116 6.1e-06 54.7 41 65.9
A04p21560 Brassica napus HOM05D006634 ORTHO05D008282 6.1e-06 54.7 40 60.0


User provided reference genes

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