Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G0455 Cannabis sativa HOM05D007696 ORTHO05D009719 2.1e-104 382.5 207 100.0
CANSAT54G2838 Cannabis sativa HOM05D007696 ORTHO05D009719 2.8e-101 372.1 207 97.1
QL10p022430 Quercus lobata HOM05D007696 ORTHO05D009719 7.7e-59 231.1 208 61.5
FAN13G0134 Fragaria x ananassa HOM05D007696 ORTHO05D009719 2.9e-58 229.2 207 58.5
RcHm_v2.0_Chr7g0184691 Rosa chinensis HOM05D007696 ORTHO05D009719 6.5e-58 228.0 207 59.4
CiPaw.15G127500 Carya illinoinensis HOM05D007696 ORTHO05D009719 1.5e-57 226.9 208 60.1
FAN08G1182 Fragaria x ananassa HOM05D007696 ORTHO05D009719 1.9e-57 226.5 207 58.0
FvH4_5g12640 Fragaria vesca HOM05D007696 ORTHO05D009719 5.5e-57 224.9 208 57.2
GSVIVG01008244001 Vitis vinifera HOM05D007696 ORTHO05D009719 1.0e-55 220.7 208 58.7
FAN18G3725 Fragaria x ananassa HOM05D007696 ORTHO05D009719 6.8e-55 218.0 208 56.7
Prupe.5G218000 Prunus persica HOM05D007696 ORTHO05D009719 4.4e-54 215.3 207 58.9
FAN04G2461 Fragaria x ananassa HOM05D007696 ORTHO05D009719 7.5e-54 214.5 220 55.0
Manes.01G020300 Manihot esculenta HOM05D007696 ORTHO05D009719 8.3e-53 211.1 202 56.9
TWI81G0276 Tripterygium wilfordii HOM05D007696 ORTHO05D009719 1.8e-52 209.9 203 59.1
Atru.chr9.778 Acer truncatum HOM05D007696 ORTHO05D009719 7.0e-52 208.0 200 56.0
Actinidia39813 Actinidia chinensis HOM05D007696 ORTHO05D009719 9.1e-52 207.6 208 55.3
Potri.015G049800 Populus trichocarpa HOM05D007696 ORTHO05D009719 1.2e-48 197.2 202 53.0
Lj9A429T50 Lonicera japonica HOM05D007696 ORTHO05D009719 3.6e-48 195.7 203 54.7
MD14G1222400 Malus domestica HOM05D007696 ORTHO05D009719 4.7e-48 195.3 202 53.0
Sc04g0003700 Simmondsia chinensis HOM05D007696 ORTHO05D009719 7.5e-46 188.0 203 49.3
Cfa019805 Carpinus fangiana HOM05D007696 ORTHO05D009719 9.8e-46 187.6 197 54.8
Lsat_1_v5_gn_4_115821 Lactuca sativa HOM05D007696 ORTHO05D009719 6.3e-45 184.9 200 53.5
COL.COLO4_16235 Corchorus olitorius HOM05D007696 ORTHO05D009719 8.3e-45 184.5 171 59.1
ECA232G0656 Erigeron canadensis HOM05D007696 ORTHO05D009719 2.4e-44 183.0 201 51.2
Aqoxy3G03910 Aquilegia oxysepala HOM05D007696 ORTHO05D009719 5.4e-44 181.8 208 47.6
Gohir.D08G105400 Gossypium hirsutum HOM05D007696 ORTHO05D009719 7.0e-44 181.4 171 58.5
Gorai.004G112300 Gossypium raimondii HOM05D007696 ORTHO05D009719 7.0e-44 181.4 171 58.5
Lalb_Chr19g0140261 Lupinus albus HOM05D007696 ORTHO05D009719 7.0e-44 181.4 208 49.0
Cc04_g07460 Coffea canephora HOM05D007696 ORTHO05D009719 4.5e-43 178.7 203 49.3
Gohir.A08G094200 Gossypium hirsutum HOM05D007696 ORTHO05D009719 1.7e-42 176.8 171 56.7
Dinv07368 Davidia involucrata HOM05D007696 ORTHO05D009719 5.0e-42 175.3 205 49.3
Thecc.03G029300 Theobroma cacao HOM05D007696 ORTHO05D009719 1.1e-41 174.1 171 55.6
Phvul.011G012300 Phaseolus vulgaris HOM05D007696 ORTHO05D009719 4.3e-41 172.2 208 47.6
Duzib068G0054 Durio zibethinus HOM05D007696 ORTHO05D009719 1.2e-40 170.6 171 55.0
AUR62032195 Chenopodium quinoa HOM05D007696 ORTHO05D009719 1.6e-40 170.2 208 45.2
FAN18G2008 Fragaria x ananassa HOM05D007696 ORTHO05D009719 2.8e-40 169.5 234 43.2
Ciclev10022427m.g Citrus clementina HOM05D007696 ORTHO05D009719 6.1e-40 168.3 171 55.6
arahy.Tifrunner.gnm1.ann1.ISQN6X Arachis hypogaea HOM05D007696 ORTHO05D009719 8.9e-39 164.5 203 47.3
Oeu055893.1 Olea europaea HOM05D007696 ORTHO05D009719 5.8e-38 161.8 169 52.7
AUR62036960 Chenopodium quinoa HOM05D007696 ORTHO05D009719 2.9e-37 159.5 208 44.2
Lj3g0018148 Lotus japonicus HOM05D007696 ORTHO05D009719 1.1e-36 157.5 203 45.3
vmacro17668 Vaccinium macrocarpon HOM05D007696 ORTHO05D009719 1.9e-36 156.8 205 45.4
VMungo1127G1702 Vigna mungo HOM05D007696 ORTHO05D009719 1.9e-36 156.8 203 45.3
PSO063G6876 Papaver somniferum HOM05D007696 ORTHO05D009719 2.4e-36 156.4 201 45.3
TAR622G0575 Trochodendron aralioides HOM05D007696 ORTHO05D009719 5.4e-36 155.2 171 51.5
BcaB01g01733 Brassica carinata HOM05D007696 ORTHO05D009719 1.2e-35 154.1 167 50.3
Nn4g23733 Nelumbo nucifera HOM05D007696 ORTHO05D009719 2.7e-35 152.9 201 44.3
MBI13_g27794_MAGBIO Magnolia biondii HOM05D007696 ORTHO05D009719 4.6e-35 152.1 178 48.3
Hund10004 Selenicereus undatus HOM05D007696 ORTHO05D009719 1.3e-34 150.6 208 43.8
Eucgr.K02660 Eucalyptus grandis HOM05D007696 ORTHO05D009719 1.7e-34 150.2 178 46.1
HanXRQChr09g0269891 Helianthus annuus HOM05D007696 ORTHO05D009719 1.7e-34 150.2 217 44.7
THA.LOC104821847 Tarenaya hassleriana HOM05D007696 ORTHO05D009719 3.9e-34 149.1 167 47.9
TPR.G30177 Trifolium pratense HOM05D007696 ORTHO05D009719 8.6e-34 147.9 198 44.9
Thhalv10027967m.g Eutrema salsugineum HOM05D007696 ORTHO05D009719 1.5e-33 147.1 167 47.9
Sp7g03680 Schrenkiella parvula HOM05D007696 ORTHO05D009719 4.3e-33 145.6 167 45.5
EL10Ac5g11256 Beta vulgaris HOM05D007696 ORTHO05D009719 4.0e-31 139.0 208 43.3
arahy.Tifrunner.gnm1.ann1.2ZW1BF Arachis hypogaea HOM05D007696 ORTHO05D009719 8.9e-31 137.9 238 39.5
CAN.G438.120 Capsicum annuum HOM05D007696 ORTHO05D009719 1.9e-28 130.2 167 46.1
Glyma.09G227800 Glycine max HOM05D007696 ORTHO05D009719 9.2e-28 127.9 171 42.7
AT1G61415 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 6.0e-27 125.2 165 42.4
Zm00001eb347780 Zea mays HOM05D007696 ORTHO05D009719 6.0e-27 125.2 201 38.8
Psat7g166400 Pisum sativum HOM05D007696 ORTHO05D009719 2.5e-25 119.8 180 41.1
AL2G14870 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 4.3e-25 119.0 165 40.6
AL2G14920 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 3.6e-24 115.9 165 40.6
Medtr0085s0020 Medicago truncatula HOM05D007696 ORTHO05D009719 8.1e-24 114.8 131 47.3
CARHR051130 Cardamine hirsuta HOM05D007696 ORTHO05D009719 1.8e-23 113.6 167 40.1
BcaC04g21230 Brassica carinata HOM05D007696 ORTHO05D009719 2.3e-23 113.2 167 39.5
C09p34110 Brassica napus HOM05D007696 ORTHO05D009719 2.3e-23 113.2 167 39.5
BolC9t56248H Brassica oleracea HOM05D007696 ORTHO05D009719 2.3e-23 113.2 167 39.5
A09p26940 Brassica napus HOM05D007696 ORTHO05D009719 3.1e-23 112.8 167 39.5
BraA09t38264Z Brassica rapa HOM05D007696 ORTHO05D009719 3.1e-23 112.8 167 39.5
Cpa.g.sc13.41 Carica papaya HOM05D007696 ORTHO05D009719 2.9e-21 106.3 110 52.7
Hma1.2p1_0340F.1_g129840 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 1.4e-20 104.0 97 57.7
Hma1.2p1_0340F.1_g129846 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 1.4e-20 104.0 97 57.7
Carub.0002s0377 Capsella rubella HOM05D007696 ORTHO05D009719 4.1e-20 102.4 165 38.2
Os05g0275600 Oryza sativa ssp. japonica HOM05D007696 ORTHO05D009719 4.1e-20 102.4 200 34.5
CSS0029722 Camellia sinensis var. sinensis HOM05D007696 ORTHO05D009719 7.1e-20 101.7 108 55.6
DCAR_011551 Daucus carota HOM05D007696 ORTHO05D009719 7.8e-19 98.2 106 52.8
Hma1.2p1_0340F.1_g129830 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 4.0e-15 85.9 70 61.4
Hma1.2p1_0340F.1_g129843 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 4.0e-15 85.9 70 61.4
Rhsim08G0136100 Rhododendron simsii HOM05D007696 ORTHO05D009719 8.9e-15 84.7 265 29.1
CDE02G2124 Ceratophyllum demersum HOM05D007696 ORTHO05D009719 6.4e-13 78.6 104 42.3
Sabra15G0078100 Salix brachista HOM05D007696 ORTHO05D009719 8.4e-13 78.2 100 41.0
Haze_18634 Corylus avellana HOM05D007696 ORTHO05D009719 4.2e-12 75.9 70 60.0
Lsat_1_v5_gn_9_67701 Lactuca sativa HOM05D007696 ORTHO05D009719 1.6e-11 73.9 58 65.5
AT1G61450 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 8.1e-08 61.6 101 36.6
Aa31LG8G5380 Aethionema arabicum HOM05D007696 ORTHO05D009719 3.4e-06 56.2 137 29.2


User provided reference genes

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