Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G0336 Cannabis sativa HOM05D006024 ORTHO05D007505 3.8e-202 708.0 361 100.0
CiPaw.13G165500 Carya illinoinensis HOM05D006024 ORTHO05D007505 2.9e-162 575.5 357 79.6
Prupe.6G018500 Prunus persica HOM05D006024 ORTHO05D007505 5.0e-162 574.7 356 80.1
RcHm_v2.0_Chr5g0078111 Rosa chinensis HOM05D006024 ORTHO05D007505 3.0e-159 565.5 357 78.7
MD11G1022800 Malus domestica HOM05D006024 ORTHO05D007505 2.5e-158 562.4 358 78.5
Cfa009695 Carpinus fangiana HOM05D006024 ORTHO05D007505 3.3e-158 562.0 357 77.3
Hma1.2p1_2304F.1_g319350 Hydrangea macrophylla HOM05D006024 ORTHO05D007505 5.7e-158 561.2 357 78.2
Cpa.g.sc84.110 Carica papaya HOM05D006024 ORTHO05D007505 2.2e-157 559.3 362 78.2
FvH4_3g43551 Fragaria vesca HOM05D006024 ORTHO05D007505 2.4e-156 555.8 357 77.3
Ciclev10015756m.g Citrus clementina HOM05D006024 ORTHO05D007505 2.9e-154 548.9 357 76.5
TWI60G1552 Tripterygium wilfordii HOM05D006024 ORTHO05D007505 2.9e-154 548.9 356 77.0
Sed0023125 Sechium edule HOM05D006024 ORTHO05D007505 3.2e-153 545.4 355 78.3
Thecc.09G223300 Theobroma cacao HOM05D006024 ORTHO05D007505 5.5e-153 544.7 362 75.7
Eucgr.J00813 Eucalyptus grandis HOM05D006024 ORTHO05D007505 9.4e-153 543.9 355 76.9
CsaV3_4G023790 Cucumis sativus L. HOM05D006024 ORTHO05D007505 3.6e-152 542.0 355 76.9
Atru.chr3.2505 Acer truncatum HOM05D006024 ORTHO05D007505 1.1e-150 537.0 359 74.9
MELO3C014640.2 Cucumis melo HOM05D006024 ORTHO05D007505 1.1e-150 537.0 356 76.1
GSVIVG01025335001 Vitis vinifera HOM05D006024 ORTHO05D007505 1.5e-150 536.6 362 72.9
A05p27990 Brassica napus HOM05D006024 ORTHO05D007505 3.3e-150 535.4 361 74.8
Manes.14G014400 Manihot esculenta HOM05D006024 ORTHO05D007505 5.7e-150 534.6 363 74.4
Potri.003G210900 Populus trichocarpa HOM05D006024 ORTHO05D007505 5.7e-150 534.6 361 72.3
Aqoxy1G00184 Aquilegia oxysepala HOM05D006024 ORTHO05D007505 9.7e-150 533.9 362 74.0
CSS0019947 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 9.7e-150 533.9 355 75.5
CSS0045029 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 9.7e-150 533.9 355 75.5
Thhalv10021019m.g Eutrema salsugineum HOM05D006024 ORTHO05D007505 1.7e-149 533.1 361 74.8
FAN11G3540 Fragaria x ananassa HOM05D006024 ORTHO05D007505 2.8e-149 532.3 360 75.3
Gorai.010G128200 Gossypium raimondii HOM05D006024 ORTHO05D007505 4.8e-149 531.6 356 75.3
Gohir.D06G112300 Gossypium hirsutum HOM05D006024 ORTHO05D007505 1.4e-148 530.0 356 75.0
Potri.T085501 Populus trichocarpa HOM05D006024 ORTHO05D007505 1.4e-148 530.0 362 72.1
Cc01_g04140 Coffea canephora HOM05D006024 ORTHO05D007505 3.1e-148 528.9 356 73.6
QL01p006224 Quercus lobata HOM05D006024 ORTHO05D007505 3.1e-148 528.9 385 69.9
AT3G20790 Arabidopsis thaliana HOM05D006024 ORTHO05D007505 4.1e-148 528.5 361 73.4
Sp3g18810 Schrenkiella parvula HOM05D006024 ORTHO05D007505 4.1e-148 528.5 361 73.7
COL.COLO4_09894 Corchorus olitorius HOM05D006024 ORTHO05D007505 1.2e-147 526.9 362 72.7
Sopen01g002620 Solanum pennellii HOM05D006024 ORTHO05D007505 1.2e-147 526.9 357 72.5
Solyc01g006630.3 Solanum lycopersicum HOM05D006024 ORTHO05D007505 3.5e-147 525.4 357 72.3
AL3G34710 Arabidopsis lyrata HOM05D006024 ORTHO05D007505 7.7e-147 524.2 361 74.0
Carub.0003s2075 Capsella rubella HOM05D006024 ORTHO05D007505 7.7e-147 524.2 361 74.0
PGR119G1295 Punica granatum HOM05D006024 ORTHO05D007505 7.7e-147 524.2 355 73.8
CARHR096620 Cardamine hirsuta HOM05D006024 ORTHO05D007505 1.7e-146 523.1 361 73.7
Glyma.13G342800 Glycine max HOM05D006024 ORTHO05D007505 5.0e-146 521.5 362 73.2
Lj4g0026168 Lotus japonicus HOM05D006024 ORTHO05D007505 5.0e-146 521.5 356 73.6
Oeu042179.3 Olea europaea HOM05D006024 ORTHO05D007505 6.5e-146 521.2 356 71.9
arahy.Tifrunner.gnm1.ann1.7L1RE9 Arachis hypogaea HOM05D006024 ORTHO05D007505 8.5e-146 520.8 354 74.0
Lj3g0007180 Lotus japonicus HOM05D006024 ORTHO05D007505 1.9e-145 519.6 356 73.6
BolC5t33061H Brassica oleracea HOM05D006024 ORTHO05D007505 2.5e-145 519.2 361 72.9
THA.LOC104816910 Tarenaya hassleriana HOM05D006024 ORTHO05D007505 1.6e-144 516.5 361 72.3
C05p43290 Brassica napus HOM05D006024 ORTHO05D007505 2.1e-144 516.2 361 72.6
BraA05t21682Z Brassica rapa HOM05D006024 ORTHO05D007505 2.1e-144 516.2 361 72.9
PSO339G6331 Papaver somniferum HOM05D006024 ORTHO05D007505 2.1e-144 516.2 357 70.9
Phvul.005G150400 Phaseolus vulgaris HOM05D006024 ORTHO05D007505 2.7e-144 515.8 356 73.6
Duzib168G0763 Durio zibethinus HOM05D006024 ORTHO05D007505 3.6e-144 515.4 362 73.2
BcaC05g28281 Brassica carinata HOM05D006024 ORTHO05D007505 4.7e-144 515.0 361 72.0
Nn7g36060 Nelumbo nucifera HOM05D006024 ORTHO05D007505 2.3e-143 512.7 356 71.6
HanXRQChr02g0056471 Helianthus annuus HOM05D006024 ORTHO05D007505 3.0e-143 512.3 357 73.7
BcaB06g26149 Brassica carinata HOM05D006024 ORTHO05D007505 8.8e-143 510.8 361 71.7
DCAR_002037 Daucus carota HOM05D006024 ORTHO05D007505 2.6e-142 509.2 358 70.1
MSTRG.21409 Avicennia marina HOM05D006024 ORTHO05D007505 7.5e-142 507.7 356 72.2
VMungo1080G1755 Vigna mungo HOM05D004763 ORTHO05D007492 1.3e-141 506.9 356 71.6
TPR.G18832 Trifolium pratense HOM05D006024 ORTHO05D007505 5.3e-140 501.5 364 71.4
Ca_01271_v3 Cicer arietinum L. HOM05D006024 ORTHO05D007505 1.6e-139 500.0 356 71.3
Lalb_Chr24g0396941 Lupinus albus HOM05D006024 ORTHO05D007505 5.9e-139 498.0 359 70.8
Lsat_1_v5_gn_6_50101 Lactuca sativa HOM05D006024 ORTHO05D007505 2.2e-138 496.1 356 70.5
Dinv36303 Davidia involucrata HOM05D006024 ORTHO05D007505 3.2e-137 492.3 313 77.0
Nitab4.5_0003796g0050 Nicotiana tabacum HOM05D006024 ORTHO05D007505 9.4e-137 490.7 363 68.9
FAN11G0987 Fragaria x ananassa HOM05D006024 ORTHO05D007505 1.6e-136 490.0 360 71.1
Peaxi162Scf00559g00415 Petunia axillaris HOM05D006024 ORTHO05D007505 4.7e-136 488.4 362 68.8
CAN.G388.68 Capsicum annuum HOM05D006024 ORTHO05D007505 6.1e-136 488.0 391 65.0
Medtr2g098500 Medicago truncatula HOM05D006024 ORTHO05D007505 4.0e-135 485.3 355 70.1
Os09g0280300 Oryza sativa ssp. japonica HOM05D006024 ORTHO05D007505 8.8e-135 484.2 361 66.2
MSTRG.12483 Avicennia marina HOM05D006024 ORTHO05D007505 2.6e-134 482.6 358 67.6
EL10Ac4g10317 Beta vulgaris HOM05D006024 ORTHO05D007505 1.3e-133 480.3 361 67.9
AUR62019251 Chenopodium quinoa HOM05D006024 ORTHO05D007505 1.4e-132 476.9 354 68.9
Gohir.A06G108500 Gossypium hirsutum HOM05D006024 ORTHO05D007505 3.1e-132 475.7 355 69.3
Migut.N02293 Erythranthe guttata HOM05D006024 ORTHO05D007505 1.7e-130 469.9 359 66.9
AUR62000078 Chenopodium quinoa HOM05D006024 ORTHO05D007505 1.5e-129 466.8 354 67.8
Hund22080 Selenicereus undatus HOM05D006024 ORTHO05D007505 7.2e-129 464.5 353 67.4
Aa31LG8G7600 Aethionema arabicum HOM05D006024 ORTHO05D007505 3.0e-127 459.1 360 67.8
Migut.D00559 Erythranthe guttata HOM05D006024 ORTHO05D007505 3.4e-126 455.7 362 65.7
ATR0605G294 Amborella trichopoda HOM05D006024 ORTHO05D007505 1.1e-124 450.7 356 62.6
arahy.Tifrunner.gnm1.ann1.3AB71G Arachis hypogaea HOM05D006024 ORTHO05D007505 6.6e-122 441.4 352 66.5
Lju1319A3G40 Lonicera japonica HOM05D006024 ORTHO05D007505 1.1e-121 440.7 371 63.1
VMungo0251G0909 Vigna mungo HOM05D006024 ORTHO05D007505 3.3e-121 439.1 356 61.8
VMungo1080G1390 Vigna mungo HOM05D006024 ORTHO05D007505 4.3e-121 438.7 356 61.2
Lj1A365G18 Lonicera japonica HOM05D006024 ORTHO05D007505 5.6e-121 438.3 375 62.1
vmacro04169 Vaccinium macrocarpon HOM05D006024 ORTHO05D007505 7.3e-121 438.0 479 53.0
MBI04_g27131_MAGBIO Magnolia biondii HOM05D006024 ORTHO05D007505 4.1e-116 422.2 356 61.2
SGA_v2.0_scaffold1G00800 Striga asiatica HOM05D006024 ORTHO05D007505 8.6e-114 414.5 356 62.1
SEGI_39854 Sequoiadendron giganteum HOM05D006024 ORTHO05D007505 3.3e-113 412.5 353 58.9
unitig_8.g3081 Utricularia gibba HOM05D006024 ORTHO05D007505 9.8e-102 374.4 358 57.0
Rhsim13G0225400 Rhododendron simsii HOM05D006024 ORTHO05D007505 5.4e-100 368.6 258 70.9
Sc06g0004470 Simmondsia chinensis HOM05D006024 ORTHO05D007505 3.3e-97 359.4 257 68.9
Haze_23046 Corylus avellana HOM05D006024 ORTHO05D007505 5.6e-97 358.6 295 63.4
TAR636G0774 Trochodendron aralioides HOM05D006024 ORTHO05D007505 4.7e-96 355.5 252 68.3
ECA233G0904 Erigeron canadensis HOM05D006024 ORTHO05D007505 3.1e-95 352.8 251 70.5
Pp3c6_24290 Physcomitrium patens HOM05D006024 ORTHO05D007505 1.2e-94 350.9 350 50.3
Mapoly0150s0011 Marchantia polymorpha HOM05D006024 ORTHO05D007505 2.3e-90 336.7 355 47.6
Pp3c16_13070 Physcomitrium patens HOM05D006024 ORTHO05D007505 2.8e-88 329.7 375 46.1
Nitab4.5_0008137g0040 Nicotiana tabacum HOM05D006024 ORTHO05D007505 1.2e-86 324.3 361 51.8
SMO146G0097 Selaginella moellendorffii HOM05D006024 ORTHO05D007505 3.4e-86 322.8 344 48.0
AagrBONN_evm.TU.Sc2ySwM_344.3372 Anthoceros agrestis HOM05D006024 ORTHO05D007505 3.5e-83 312.8 360 45.0
ClCG02G023630 Citrullus lanatus HOM05D006024 ORTHO05D007505 7.3e-81 305.1 200 75.5
SMO116G0160 Selaginella moellendorffii HOM05D006024 ORTHO05D007505 4.8e-80 302.4 360 47.2
Zm00001eb094580 Zea mays HOM05D006024 ORTHO05D007505 1.5e-78 297.4 201 69.7
SMO144G0113 Selaginella moellendorffii HOM05D006024 ORTHO05D007505 1.4e-76 290.8 344 45.3
AagrBONN_evm.TU.Sc2ySwM_344.254 Anthoceros agrestis HOM05D006024 ORTHO05D007505 5.4e-76 288.9 359 43.2
Pp3c3_20310 Physcomitrium patens HOM05D006024 ORTHO05D007505 6.4e-69 265.4 356 43.0
Mapoly0033s0066 Marchantia polymorpha HOM05D006024 ORTHO05D007505 8.4e-69 265.0 353 42.2
FAN16G2307 Fragaria x ananassa HOM05D006024 ORTHO05D007505 7.4e-57 225.3 153 74.5
HPP92_000457 Vanilla planifolia HOM05D006024 ORTHO05D007505 1.8e-47 194.1 148 64.9
TAR636G1381 Trochodendron aralioides HOM05D006024 ORTHO05D007505 3.9e-42 176.4 189 55.0
Cre01.g023300 Chlamydomonas reinhardtii HOM05D006024 ORTHO05D007505 8.2e-40 168.7 401 32.4
Psat7g086040 Pisum sativum HOM05D006024 ORTHO05D007505 2.7e-35 153.7 227 41.0
Sc06g0004480 Simmondsia chinensis HOM05D006024 ORTHO05D007505 2.3e-34 150.6 99 72.7
Cfa023900 Carpinus fangiana HOM05D006024 ORTHO05D007505 6.7e-34 149.1 358 30.7
ECA233G1997 Erigeron canadensis HOM05D006024 ORTHO05D007505 3.7e-32 143.3 98 71.4
Psat6g204000 Pisum sativum HOM05D006024 ORTHO05D007505 4.1e-31 139.8 152 54.6
Rhsim13G0225300 Rhododendron simsii HOM05D006024 ORTHO05D007505 9.1e-31 138.7 96 75.0
FAN25G0441 Fragaria x ananassa HOM05D006024 ORTHO05D007505 5.9e-30 136.0 128 57.0
Psat5g288680 Pisum sativum HOM05D006024 ORTHO05D007505 2.5e-28 130.6 100 69.0
Actinidia16298 Actinidia chinensis HOM05D006024 ORTHO05D007505 3.0e-26 123.6 92 64.1
Glyma.15G031500 Glycine max HOM05D006024 ORTHO05D007505 1.2e-25 121.7 134 51.5
Medtr8g016390 Medicago truncatula HOM05D006024 ORTHO05D007505 4.5e-22 109.8 97 57.7
CSS0049558 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 7.7e-22 109.0 83 71.1
CSS0042824 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 2.9e-21 107.1 84 69.0
C01p43430 Brassica napus HOM05D006024 ORTHO05D007505 1.2e-19 101.7 105 53.3
BolC1t04302H Brassica oleracea HOM05D006024 ORTHO05D007505 1.2e-19 101.7 105 53.3
Psat5g288640 Pisum sativum HOM05D006024 ORTHO05D007505 4.4e-17 93.2 131 43.5
CSS0043067 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 3.7e-16 90.1 90 58.9
Oeu037561.1 Olea europaea HOM05D006024 ORTHO05D007505 1.3e-13 81.6 51 70.6
BcaC09g49021 Brassica carinata HOM05D006024 ORTHO05D007505 2.1e-11 74.3 81 54.3


User provided reference genes

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