Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G0301 Cannabis sativa HOM05D003895 ORTHO05D004723 0.0e+00 1505.3 733 100.0
Prupe.5G126000 Prunus persica HOM05D003895 ORTHO05D004723 0.0e+00 1370.5 734 89.2
FAN08G0955 Fragaria x ananassa HOM05D003895 ORTHO05D004723 0.0e+00 1360.5 733 88.1
FvH4_5g11490 Fragaria vesca HOM05D003895 ORTHO05D004723 0.0e+00 1360.1 731 88.0
FAN18G2619 Fragaria x ananassa HOM05D003895 ORTHO05D004723 0.0e+00 1359.0 731 87.8
FAN18G3428 Fragaria x ananassa HOM05D003895 ORTHO05D004723 0.0e+00 1359.0 731 87.8
FAN04G2440 Fragaria x ananassa HOM05D003895 ORTHO05D004723 0.0e+00 1358.2 733 87.9
MD14G1134200 Malus domestica HOM05D003895 ORTHO05D004723 0.0e+00 1357.4 734 88.4
RcHm_v2.0_Chr7g0186311 Rosa chinensis HOM05D003895 ORTHO05D004723 0.0e+00 1355.9 733 88.3
MD06G1113100 Malus domestica HOM05D003895 ORTHO05D004723 0.0e+00 1352.0 734 88.0
Cfa011961 Carpinus fangiana HOM05D003895 ORTHO05D004723 0.0e+00 1343.6 734 87.6
QL02p029300 Quercus lobata HOM05D003895 ORTHO05D004723 0.0e+00 1342.8 732 87.7
CiPaw.11G115900 Carya illinoinensis HOM05D003895 ORTHO05D004723 0.0e+00 1340.1 733 87.4
Thecc.03G303200 Theobroma cacao HOM05D003895 ORTHO05D004723 0.0e+00 1328.5 733 85.9
Potri.001G087400 Populus trichocarpa HOM05D003895 ORTHO05D004723 0.0e+00 1327.8 733 86.6
Potri.003G143700 Populus trichocarpa HOM05D003895 ORTHO05D004723 0.0e+00 1327.4 733 86.5
Gorai.004G131300 Gossypium raimondii HOM05D003895 ORTHO05D004723 0.0e+00 1325.8 733 85.9
Migut.E00651 Erythranthe guttata HOM05D003895 ORTHO05D004723 0.0e+00 1324.3 733 85.1
Gohir.D08G124600 Gossypium hirsutum HOM05D003895 ORTHO05D004723 0.0e+00 1323.9 733 85.9
Manes.02G005900 Manihot esculenta HOM05D003895 ORTHO05D004723 0.0e+00 1323.1 731 85.9
Ciclev10019024m.g Citrus clementina HOM05D003895 ORTHO05D004723 0.0e+00 1321.6 732 85.4
Ciclev10024991m.g Citrus clementina HOM05D003895 ORTHO05D004723 0.0e+00 1321.6 732 85.9
Aqoxy2G01051 Aquilegia oxysepala HOM05D003895 ORTHO05D004723 0.0e+00 1319.7 733 85.0
Haze_09120 Corylus avellana HOM05D003895 ORTHO05D004723 0.0e+00 1319.3 749 85.3
Lalb_Chr16g0390761 Lupinus albus HOM05D003895 ORTHO05D004723 0.0e+00 1318.9 733 85.8
PGR042G2513 Punica granatum HOM05D003895 ORTHO05D004723 0.0e+00 1317.8 734 85.7
Ca_17453_v3 Cicer arietinum L. HOM05D003895 ORTHO05D004723 0.0e+00 1315.4 733 85.9
Duzib068G0704 Durio zibethinus HOM05D003895 ORTHO05D004723 0.0e+00 1315.1 733 85.7
Lj4g0018300 Lotus japonicus HOM05D003895 ORTHO05D004723 0.0e+00 1313.1 733 84.7
TWI60G1173 Tripterygium wilfordii HOM05D003895 ORTHO05D004723 0.0e+00 1312.4 733 85.4
Oeu009988.1 Olea europaea HOM05D003895 ORTHO05D004723 0.0e+00 1310.8 733 84.4
TAR629G1064 Trochodendron aralioides HOM05D003895 ORTHO05D004723 0.0e+00 1310.4 734 85.4
MSTRG.13762 Avicennia marina HOM05D003895 ORTHO05D004723 0.0e+00 1309.3 731 84.8
Solyc08g082830.3 Solanum lycopersicum HOM05D003895 ORTHO05D004723 0.0e+00 1308.1 733 84.9
Glyma.05G219500 Glycine max HOM05D003895 ORTHO05D004723 0.0e+00 1307.7 734 85.4
Sabra01G0063700 Salix brachista HOM05D003895 ORTHO05D004723 0.0e+00 1307.7 733 85.3
PGSC0003DMG400012128 Solanum tuberosum HOM05D003895 ORTHO05D004723 0.0e+00 1307.4 733 84.7
Psat7g023560 Pisum sativum HOM05D003895 ORTHO05D004723 0.0e+00 1307.0 734 85.1
CSS0003453 Camellia sinensis var. sinensis HOM05D003895 ORTHO05D004723 0.0e+00 1306.6 733 85.1
Sabra03G0104100 Salix brachista HOM05D003895 ORTHO05D004723 0.0e+00 1305.8 776 82.1
Cpa.g.sc15.11 Carica papaya HOM05D003895 ORTHO05D004723 0.0e+00 1305.4 746 84.6
PSO170G0459 Papaver somniferum HOM05D003895 ORTHO05D004723 0.0e+00 1305.4 735 84.8
Medtr8g099885 Medicago truncatula HOM05D003895 ORTHO05D004723 0.0e+00 1305.0 734 85.1
Eucgr.E01025 Eucalyptus grandis HOM05D003895 ORTHO05D004723 0.0e+00 1304.7 731 84.8
Nitab4.5_0002439g0120 Nicotiana tabacum HOM05D003895 ORTHO05D004723 0.0e+00 1304.7 733 84.4
Actinidia04389 Actinidia chinensis HOM05D003895 ORTHO05D004723 0.0e+00 1303.5 733 85.1
Phvul.002G328900 Phaseolus vulgaris HOM05D003895 ORTHO05D004723 0.0e+00 1302.7 733 85.0
TPR.G18245 Trifolium pratense HOM05D003895 ORTHO05D004723 0.0e+00 1301.6 733 85.1
Cc05_g02370 Coffea canephora HOM05D003895 ORTHO05D004723 0.0e+00 1300.4 735 84.5
Hund14202 Selenicereus undatus HOM05D003895 ORTHO05D004723 0.0e+00 1300.4 733 84.7
TPR.G3395 Trifolium pratense HOM05D003895 ORTHO05D004723 0.0e+00 1300.4 734 85.0
Aa31LG2G1550 Aethionema arabicum HOM05D003895 ORTHO05D004723 0.0e+00 1299.6 733 84.4
Cc08_g16460 Coffea canephora HOM05D003895 ORTHO05D004723 0.0e+00 1299.3 733 83.5
Lj4g0016220 Lotus japonicus HOM05D003895 ORTHO05D004723 0.0e+00 1297.7 733 83.8
MELO3C005756.2 Cucumis melo HOM05D003895 ORTHO05D004723 0.0e+00 1297.0 733 84.9
CSS0024936 Camellia sinensis var. sinensis HOM05D003895 ORTHO05D004723 0.0e+00 1296.2 733 84.6
SalBow2G2362 Salvia bowleyana HOM05D003895 ORTHO05D004723 0.0e+00 1295.4 733 83.5
ECA240G1010 Erigeron canadensis HOM05D003895 ORTHO05D004723 0.0e+00 1295.0 734 84.9
CAN.G567.61 Capsicum annuum HOM05D003895 ORTHO05D004723 0.0e+00 1294.6 733 83.8
Nn3g20296 Nelumbo nucifera HOM05D003895 ORTHO05D004723 0.0e+00 1294.3 733 84.4
Nitab4.5_0002367g0210 Nicotiana tabacum HOM05D003895 ORTHO05D004723 0.0e+00 1292.7 725 84.7
Rhsim07G0079800 Rhododendron simsii HOM05D003895 ORTHO05D004723 0.0e+00 1290.8 733 84.2
COL.COLO4_10753 Corchorus olitorius HOM05D003895 ORTHO05D004723 0.0e+00 1290.0 733 84.6
THA.LOC104823616 Tarenaya hassleriana HOM05D003895 ORTHO05D004723 0.0e+00 1289.6 733 83.9
arahy.Tifrunner.gnm1.ann1.68E5M7 Arachis hypogaea HOM05D003895 ORTHO05D004723 0.0e+00 1289.2 734 84.6
HanXRQChr06g0166321 Helianthus annuus HOM05D003895 ORTHO05D004723 0.0e+00 1287.7 733 84.4
Thhalv10011266m.g Eutrema salsugineum HOM05D003895 ORTHO05D004723 0.0e+00 1287.3 733 82.4
DCAR_006502 Daucus carota HOM05D003895 ORTHO05D004723 0.0e+00 1286.9 731 83.3
Sopen08g031060 Solanum pennellii HOM05D003895 ORTHO05D004723 0.0e+00 1283.9 697 86.7
arahy.Tifrunner.gnm1.ann1.M62N24 Arachis hypogaea HOM05D003895 ORTHO05D004723 0.0e+00 1282.7 725 85.0
HanXRQChr03g0083671 Helianthus annuus HOM05D003895 ORTHO05D004723 0.0e+00 1280.4 734 83.8
Sp1g40750 Schrenkiella parvula HOM05D003895 ORTHO05D004723 0.0e+00 1276.2 733 82.1
vmacro13870 Vaccinium macrocarpon HOM05D003895 ORTHO05D004723 0.0e+00 1276.2 775 79.9
Carub.0001s4358 Capsella rubella HOM05D003895 ORTHO05D004723 0.0e+00 1274.6 733 82.7
VMungo0251G3777 Vigna mungo HOM05D003895 ORTHO05D004723 0.0e+00 1271.9 733 83.4
BcaB07g33238 Brassica carinata HOM05D003895 ORTHO05D004723 0.0e+00 1269.2 734 82.0
CARHR044680 Cardamine hirsuta HOM05D003895 ORTHO05D004723 0.0e+00 1268.1 733 82.0
A06p00400 Brassica napus HOM05D003895 ORTHO05D004723 0.0e+00 1266.9 733 81.2
BraA06t23255Z Brassica rapa HOM05D003895 ORTHO05D004723 0.0e+00 1265.8 733 81.0
BcaB04g17002 Brassica carinata HOM05D003895 ORTHO05D004723 0.0e+00 1262.7 734 81.3
AT1G55090 Arabidopsis thaliana HOM05D003895 ORTHO05D004723 0.0e+00 1261.5 733 81.2
vmacro10679 Vaccinium macrocarpon HOM05D003895 ORTHO05D004723 0.0e+00 1261.1 780 78.2
vmacro22441 Vaccinium macrocarpon HOM05D003895 ORTHO05D004723 0.0e+00 1261.1 780 78.2
AL1G63080 Arabidopsis lyrata HOM05D003895 ORTHO05D004723 0.0e+00 1260.4 733 81.3
BolC6t36080H Brassica oleracea HOM05D003895 ORTHO05D004723 0.0e+00 1258.4 733 80.6
BcaC01g01456 Brassica carinata HOM05D003895 ORTHO05D004723 0.0e+00 1257.7 733 81.0
A08p01020 Brassica napus HOM05D003895 ORTHO05D004723 0.0e+00 1257.3 733 81.0
Psat7g023520 Pisum sativum HOM05D003895 ORTHO05D004723 0.0e+00 1255.0 732 81.8
C06p10070 Brassica napus HOM05D003895 ORTHO05D004723 0.0e+00 1253.8 733 80.5
BcaC08g43605 Brassica carinata HOM05D003895 ORTHO05D004723 0.0e+00 1253.0 733 80.6
Oeu059576.4 Olea europaea HOM05D003895 ORTHO05D004723 0.0e+00 1253.0 783 77.8
GSVIVG01019608001 Vitis vinifera HOM05D003895 ORTHO05D004723 0.0e+00 1248.4 734 81.3
ClCG01G001820 Citrullus lanatus HOM05D003895 ORTHO05D004723 0.0e+00 1245.7 831 74.8
AUR62029097 Chenopodium quinoa HOM05D003895 ORTHO05D004723 0.0e+00 1245.0 736 81.4
AUR62015016 Chenopodium quinoa HOM05D003895 ORTHO05D004723 0.0e+00 1238.0 751 80.2
EL10Ac5g12963 Beta vulgaris HOM05D003895 ORTHO05D004723 0.0e+00 1229.5 705 81.8
Lj2C160T5 Lonicera japonica HOM05D003895 ORTHO05D004723 0.0e+00 1226.1 731 81.3
Sc01g0010470 Simmondsia chinensis HOM05D003895 ORTHO05D004723 0.0e+00 1224.5 663 87.2
Lsat_1_v5_gn_6_83601 Lactuca sativa HOM05D003895 ORTHO05D004723 0.0e+00 1224.2 733 81.6
C03p92220 Brassica napus HOM05D003895 ORTHO05D004723 0.0e+00 1219.9 745 78.7
PSO339G2482 Papaver somniferum HOM05D003895 ORTHO05D004723 0.0e+00 1219.1 733 79.4
BolC3t21537H Brassica oleracea HOM05D003895 ORTHO05D004723 0.0e+00 1218.8 745 78.8
BraA08t32154Z Brassica rapa HOM05D003895 ORTHO05D004723 0.0e+00 1218.4 744 78.4
Peaxi162Scf00074g00431 Petunia axillaris HOM05D003895 ORTHO05D004723 0.0e+00 1212.2 733 80.1
PSO017G1958 Papaver somniferum HOM05D003895 ORTHO05D004723 0.0e+00 1203.0 735 79.7
Glyma.08G025800 Glycine max HOM05D003895 ORTHO05D004723 0.0e+00 1200.3 659 86.3
TPR.G3413 Trifolium pratense HOM05D003895 ORTHO05D004723 0.0e+00 1199.9 721 79.8
SGA_v2.0_scaffold295G47513 Striga asiatica HOM05D003895 ORTHO05D004723 0.0e+00 1196.0 733 78.6
unitig_21.g20891 Utricularia gibba HOM05D003895 ORTHO05D004723 0.0e+00 1186.4 735 77.8
CsaV3_5G001970 Cucumis sativus L. HOM05D003895 ORTHO05D004723 0.0e+00 1175.6 668 84.7
Zm00001eb094700 Zea mays HOM05D003895 ORTHO05D004723 0.0e+00 1160.2 735 75.5
MBI02_g10555_MAGBIO Magnolia biondii HOM05D003895 ORTHO05D004723 0.0e+00 1153.3 741 74.0
HPP92_025338 Vanilla planifolia HOM05D003895 ORTHO05D004723 0.0e+00 1146.3 707 76.1
Sed0021355 Sechium edule HOM05D003895 ORTHO05D004723 0.0e+00 1140.2 616 88.1
EL10Ac5g12472 Beta vulgaris HOM05D003895 ORTHO05D004723 0.0e+00 1132.5 696 77.3
Hma1.2p1_1835F.1_g304665 Hydrangea macrophylla HOM05D003895 ORTHO05D004723 0.0e+00 1127.1 616 87.3
ATR1098G082 Amborella trichopoda HOM05D003895 ORTHO05D004723 0.0e+00 1119.4 736 73.5
FAN13G0619 Fragaria x ananassa HOM05D003895 ORTHO05D004723 0.0e+00 1119.0 733 75.0
Dinv34692 Davidia involucrata HOM05D003895 ORTHO05D004723 0.0e+00 1091.6 585 88.2
Ah.12g052950 Amaranthus hybridus HOM05D003895 ORTHO05D004723 0.0e+00 1084.3 752 73.3
SEGI_31460 Sequoiadendron giganteum HOM05D003895 ORTHO05D004723 0.0e+00 1080.9 735 70.7
Manes.02G005800 Manihot esculenta HOM05D003895 ORTHO05D004723 6.7e-307 1057.0 706 72.5
AUR62019884 Chenopodium quinoa HOM05D003895 ORTHO05D004723 1.7e-286 989.2 701 70.0
CBR_g19728 Chara braunii HOM05D003895 ORTHO05D004723 3.2e-285 984.9 731 64.4
Mapoly0035s0052 Marchantia polymorpha HOM05D003895 ORTHO05D004723 1.4e-283 979.5 736 66.2
SMO174G0028 Selaginella moellendorffii HOM05D003895 ORTHO05D004723 1.7e-281 972.6 734 63.6
AagrBONN_evm.TU.Sc2ySwM_228.4970 Anthoceros agrestis HOM05D003895 ORTHO05D004723 1.2e-258 896.7 656 65.7
MCO17G006 Micromonas commoda HOM05D003895 ORTHO05D004723 1.5e-258 896.3 690 61.7
Gohir.A08G111660 Gossypium hirsutum HOM05D003895 ORTHO05D004723 8.3e-257 890.6 507 85.0
Pp3c17_21910 Physcomitrium patens HOM05D003895 ORTHO05D004723 2.3e-254 882.5 670 64.8
Os07g0167100 Oryza sativa ssp. japonica HOM05D003895 ORTHO05D004723 5.0e-254 881.3 567 75.8
SMO358G0326 Selaginella moellendorffii HOM05D003895 ORTHO05D004723 1.5e-250 869.8 697 60.4
PRCOL_00000896 Prasinoderma coloniale HOM05D003895 ORTHO05D004723 8.6e-238 827.4 702 58.1
Cre10.g435250 Chlamydomonas reinhardtii HOM05D003895 ORTHO05D004723 2.5e-229 799.3 783 53.3
Migut.E01630 Erythranthe guttata HOM05D003895 ORTHO05D004723 4.3e-229 798.5 502 76.7
Hma1.2p1_0077F.1_g039630 Hydrangea macrophylla HOM05D003895 ORTHO05D004723 2.2e-217 759.6 418 86.4
Cfa024512 Carpinus fangiana HOM05D003895 ORTHO05D004723 1.0e-206 724.2 701 52.8
MBI02_g43672_MAGBIO Magnolia biondii HOM05D003895 ORTHO05D004723 1.5e-186 657.1 422 74.6
PSO210G1536 Papaver somniferum HOM05D003895 ORTHO05D004723 1.0e-158 564.7 377 71.6
AUR62007020 Chenopodium quinoa HOM05D003895 ORTHO05D004723 1.0e-153 548.1 317 83.9
Aqoxy456s001 Aquilegia oxysepala HOM05D003895 ORTHO05D004723 8.6e-153 545.0 303 86.1
MBI05_g40947_MAGBIO Magnolia biondii HOM05D003895 ORTHO05D004723 2.1e-143 513.8 357 69.5
ECA246G1101 Erigeron canadensis HOM05D003895 ORTHO05D004723 5.7e-141 505.8 311 79.1
Haze_09105 Corylus avellana HOM05D003895 ORTHO05D004723 8.3e-140 501.9 349 74.5
MBI15_g06349_MAGBIO Magnolia biondii HOM05D003895 ORTHO05D004723 1.3e-124 451.4 341 64.8
MBI05_g43497_MAGBIO Magnolia biondii HOM05D003895 ORTHO05D004723 1.9e-112 411.0 284 69.0
SalBow2G1745 Salvia bowleyana HOM05D003895 ORTHO05D004723 2.7e-106 390.6 314 61.5
Gohir.A08G111640 Gossypium hirsutum HOM05D003895 ORTHO05D004723 2.1e-95 354.4 183 85.2
MBI05_g40946_MAGBIO Magnolia biondii HOM05D003895 ORTHO05D004723 1.6e-90 338.2 209 75.1
Psat7g023400 Pisum sativum HOM05D003895 ORTHO05D004723 8.4e-84 315.8 430 46.7
arahy.Tifrunner.gnm1.ann1.RT27P1 Arachis hypogaea HOM05D003895 ORTHO05D004723 3.0e-73 280.8 352 47.7
SalBow2G0791 Salvia bowleyana HOM05D003895 ORTHO05D004723 1.8e-70 271.6 168 72.0
BcaB04g17000 Brassica carinata HOM05D003895 ORTHO05D004723 7.7e-69 266.2 223 61.0
SalBow2G2695 Salvia bowleyana HOM05D003895 ORTHO05D004723 5.1e-65 253.4 225 57.8
BcaB04g16999 Brassica carinata HOM05D003895 ORTHO05D004723 1.1e-62 245.7 205 62.0
AagrBONN_evm.TU.Sc2ySwM_228.4951 Anthoceros agrestis HOM05D003895 ORTHO05D004723 6.3e-47 193.4 219 44.7
BcaB05g22068 Brassica carinata HOM05D003895 ORTHO05D004723 1.3e-44 185.7 101 79.2
BcaB01g00975 Brassica carinata HOM05D003895 ORTHO05D004723 2.5e-43 181.4 101 79.2
DCAR_006503 Daucus carota HOM05D001368 ORTHO05D003846 7.2e-43 179.9 207 51.7
BcaB04g17001 Brassica carinata HOM05D003895 ORTHO05D004723 4.7e-42 177.2 209 49.8
BcaB01g02352 Brassica carinata HOM05D003895 ORTHO05D004723 2.0e-32 145.2 80 78.8
BcaC01g01457 Brassica carinata HOM05D003895 ORTHO05D004723 1.0e-28 132.9 113 55.8
Sopen06g027550 Solanum pennellii HOM05D003895 ORTHO05D004723 5.0e-28 130.6 161 48.4
Nitab4.5_0000974g0050 Nicotiana tabacum HOM05D003895 ORTHO05D285369 3.7e-23 114.4 101 57.4
MBI15_g06350_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000018 1.1e-22 112.8 63 74.6
CARHR260480 Cardamine hirsuta HOM05D003895 ORTHO05D004723 1.2e-21 109.4 163 39.3
CARHR106400 Cardamine hirsuta HOM05D003895 ORTHO05D004723 1.6e-21 109.0 163 39.3
Lj4g0022111 Lotus japonicus HOM05D019175 ORTHO05D018974 2.7e-21 108.2 60 85.0
Solyc06g071240.3 Solanum lycopersicum HOM05D003895 ORTHO05D004723 1.7e-20 105.5 127 51.2
CAN.G628.62 Capsicum annuum HOM05D003895 ORTHO05D004723 1.6e-18 99.0 110 52.7
Nitab4.5_0001308g0060 Nicotiana tabacum HOM05D003895 ORTHO05D282403 6.2e-18 97.1 111 48.6
BcaB04g16998 Brassica carinata HOM05D003895 ORTHO05D004723 4.4e-16 90.9 50 78.0
Nitab4.5_0004376g0060 Nicotiana tabacum HOM05D003895 ORTHO05D286866 3.3e-11 74.7 49 77.6
Medtr3g108170 Medicago truncatula HOM05D003895 ORTHO05D260611 2.1e-10 72.0 309 28.8
Atru.chr9.1960 Acer truncatum HOM05D003895 ORTHO05D004723 1.1e-09 69.7 45 77.8
BcaC01g01459 Brassica carinata HOM05D003895 ORTHO05D004723 1.8e-09 68.9 75 50.7
BcaC01g01463 Brassica carinata HOM05D003895 ORTHO05D004723 3.1e-09 68.2 74 51.4
Glyma.17G110701 Glycine max HOM05D003895 ORTHO05D004723 3.4e-08 64.7 34 91.2
PGSC0003DMG400033059 Solanum tuberosum HOM05D003895 ORTHO05D004723 6.4e-07 60.5 40 65.0
Nitab4.5_0000050g0220 Nicotiana tabacum HOM05D003895 ORTHO05D285100 8.3e-07 60.1 43 76.7
Haze_24893 Corylus avellana HOM05D003698 ORTHO05D004320 2.4e-06 58.5 46 65.2


User provided reference genes

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