Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G0235 Cannabis sativa HOM05D000610 ORTHO05D004774 4.8e-76 287.7 142 100.0
CANSAT80G2124 Cannabis sativa HOM05D000610 ORTHO05D004774 1.2e-74 283.1 141 97.9
CiPaw.09G038900 Carya illinoinensis HOM05D000610 ORTHO05D004774 1.0e-54 216.9 150 75.3
Haze_19838 Corylus avellana HOM05D000610 ORTHO05D004774 6.7e-54 214.2 148 73.6
Prupe.7G058100 Prunus persica HOM05D000610 ORTHO05D004774 1.9e-53 212.6 149 73.2
Cfa016807 Carpinus fangiana HOM05D000610 ORTHO05D004774 2.2e-52 209.1 148 71.6
Glyma.03G136000 Glycine max HOM05D000610 ORTHO05D004774 2.8e-52 208.8 148 69.6
Ciclev10004128m.g Citrus clementina HOM05D000610 ORTHO05D004774 6.3e-52 207.6 150 71.3
Phvul.001G131150 Phaseolus vulgaris HOM05D000610 ORTHO05D004774 8.2e-52 207.2 148 69.6
Manes.09G020400 Manihot esculenta HOM05D000610 ORTHO05D004774 1.8e-51 206.1 149 69.8
VMungo1383G0969 Vigna mungo HOM05D000610 ORTHO05D004774 2.4e-51 205.7 149 71.1
FvH4_6g24100 Fragaria vesca HOM05D000610 ORTHO05D004774 3.1e-51 205.3 149 69.8
FAN02G4008 Fragaria x ananassa HOM05D000610 ORTHO05D004774 3.1e-51 205.3 149 69.8
FAN09G1277 Fragaria x ananassa HOM05D000610 ORTHO05D004774 3.1e-51 205.3 149 69.8
FAN14G3175 Fragaria x ananassa HOM05D000610 ORTHO05D004774 3.1e-51 205.3 149 69.8
Dinv18665 Davidia involucrata HOM05D000610 ORTHO05D004774 9.1e-51 203.8 150 72.0
Thecc.05G148900 Theobroma cacao HOM05D000610 ORTHO05D004774 2.0e-50 202.6 148 71.6
RcHm_v2.0_Chr3g0482761 Rosa chinensis HOM05D000610 ORTHO05D004774 3.4e-50 201.8 149 71.1
Duzib093G2237 Durio zibethinus HOM05D000610 ORTHO05D004774 1.0e-49 200.3 147 72.1
Gohir.A01G131111 Gossypium hirsutum HOM05D000610 ORTHO05D004774 1.7e-49 199.5 148 69.6
Lj1g0005409 Lotus japonicus HOM05D000610 ORTHO05D004774 1.7e-49 199.5 148 66.9
Gohir.D01G120000 Gossypium hirsutum HOM05D000610 ORTHO05D004774 2.2e-49 199.1 148 69.6
MD12G1079400 Malus domestica HOM05D000610 ORTHO05D004774 2.2e-49 199.1 149 70.5
Medtr7g091380 Medicago truncatula HOM05D000610 ORTHO05D004774 2.9e-49 198.7 148 66.9
Gorai.002G146400 Gossypium raimondii HOM05D000610 ORTHO05D004774 3.8e-49 198.4 148 69.6
CsaV3_4G011860 Cucumis sativus L. HOM05D000610 ORTHO05D004774 6.5e-49 197.6 156 64.7
Atru.chr1.1122 Acer truncatum HOM05D000610 ORTHO05D004774 8.5e-49 197.2 146 69.9
Atru.chr1.1123 Acer truncatum HOM05D000610 ORTHO05D004774 8.5e-49 197.2 146 69.9
Sc13g0001650 Simmondsia chinensis HOM05D000610 ORTHO05D004774 8.5e-49 197.2 149 67.8
TPR.G3701 Trifolium pratense HOM05D000610 ORTHO05D004774 8.5e-49 197.2 149 68.5
Potri.006G049300 Populus trichocarpa HOM05D000610 ORTHO05D004774 1.1e-48 196.8 149 69.1
MELO3C023103.2 Cucumis melo HOM05D000610 ORTHO05D004774 1.4e-48 196.4 156 64.1
arahy.Tifrunner.gnm1.ann1.50CUSQ Arachis hypogaea HOM05D000610 ORTHO05D004774 1.9e-48 196.1 148 65.5
COL.COLO4_08236 Corchorus olitorius HOM05D000610 ORTHO05D004774 7.2e-48 194.1 148 67.6
Sed0024936 Sechium edule HOM05D000610 ORTHO05D004774 9.4e-48 193.7 156 64.7
TWI53G1231 Tripterygium wilfordii HOM05D000610 ORTHO05D004774 1.2e-47 193.4 149 68.5
GSVIVG01033258001 Vitis vinifera HOM05D000610 ORTHO05D004774 2.1e-47 192.6 149 67.8
Psat3g072960 Pisum sativum HOM05D000610 ORTHO05D004774 3.6e-47 191.8 148 66.9
TAR633G1531 Trochodendron aralioides HOM05D000610 ORTHO05D004774 3.6e-47 191.8 152 67.8
Lalb_Chr25g0287161 Lupinus albus HOM05D000610 ORTHO05D004774 4.6e-47 191.4 148 65.5
TWI74G1635 Tripterygium wilfordii HOM05D000610 ORTHO05D004774 6.1e-47 191.0 149 67.8
Actinidia39216 Actinidia chinensis HOM05D000610 ORTHO05D004774 1.4e-46 189.9 149 67.1
CSS0013319 Camellia sinensis var. sinensis HOM05D000610 ORTHO05D004774 1.4e-46 189.9 150 66.7
Duzib128G1628 Durio zibethinus HOM05D000610 ORTHO05D004774 2.3e-46 189.1 148 68.9
THA.LOC104824436 Tarenaya hassleriana HOM05D000610 ORTHO05D004774 2.3e-46 189.1 151 65.6
TAR636G1590 Trochodendron aralioides HOM05D000610 ORTHO05D004774 5.1e-46 188.0 150 67.3
ClCG04G003390 Citrullus lanatus HOM05D000610 ORTHO05D004774 2.6e-45 185.7 143 67.1
PGR004G2234 Punica granatum HOM05D000610 ORTHO05D004774 4.4e-45 184.9 152 65.1
Nn7g36312 Nelumbo nucifera HOM05D000610 ORTHO05D004774 7.4e-45 184.1 153 66.7
AT2G41700 Arabidopsis thaliana HOM05D000610 ORTHO05D004774 9.7e-45 183.7 150 62.0
Eucgr.A02339 Eucalyptus grandis HOM05D000610 ORTHO05D004774 9.7e-45 183.7 150 64.7
AL4G40000 Arabidopsis lyrata HOM05D000610 ORTHO05D004774 2.2e-44 182.6 150 62.0
Ah.04g151590 Amaranthus hybridus HOM05D000610 ORTHO05D004774 4.8e-44 181.4 150 64.7
vmacro07837 Vaccinium macrocarpon HOM05D000610 ORTHO05D004774 4.8e-44 181.4 150 62.7
AUR62026051 Chenopodium quinoa HOM05D000610 ORTHO05D004774 8.2e-44 180.6 153 63.4
Cc06_g17650 Coffea canephora HOM05D000610 ORTHO05D004774 8.2e-44 180.6 149 64.4
Thhalv10016127m.g Eutrema salsugineum HOM05D000610 ORTHO05D004774 1.1e-43 180.3 150 63.3
A03p23380 Brassica napus HOM05D000610 ORTHO05D004774 1.8e-43 179.5 150 62.7
BraA03t11555Z Brassica rapa HOM05D000610 ORTHO05D004774 1.8e-43 179.5 150 62.7
Sp4g23940 Schrenkiella parvula HOM05D000610 ORTHO05D004774 1.8e-43 179.5 150 62.0
Carub.0004s2397 Capsella rubella HOM05D000610 ORTHO05D004774 6.9e-43 177.6 150 61.3
CARHR136790 Cardamine hirsuta HOM05D000610 ORTHO05D004774 6.9e-43 177.6 150 61.3
C03p27900 Brassica napus HOM05D000610 ORTHO05D004774 9.1e-43 177.2 150 61.3
BolC3t15161H Brassica oleracea HOM05D000610 ORTHO05D004774 9.1e-43 177.2 150 61.3
PSO384G3904 Papaver somniferum HOM05D000610 ORTHO05D004774 9.1e-43 177.2 150 62.7
Rhsim03G0027100 Rhododendron simsii HOM05D000610 ORTHO05D004774 1.5e-42 176.4 150 62.0
EL10Ac3g07101 Beta vulgaris HOM05D000610 ORTHO05D004774 7.7e-42 174.1 150 60.0
Solyc04g015970.3 Solanum lycopersicum HOM05D000610 ORTHO05D004774 1.0e-41 173.7 150 62.7
ECA247G3032 Erigeron canadensis HOM05D000610 ORTHO05D004774 1.3e-41 173.3 150 60.7
THA.LOC104824435 Tarenaya hassleriana HOM05D000610 ORTHO05D004774 2.9e-41 172.2 138 64.5
Hma1.2p1_0871F.1_g231090 Hydrangea macrophylla HOM05D000610 ORTHO05D004774 3.8e-41 171.8 135 65.2
Lsat_1_v5_gn_9_30620 Lactuca sativa HOM05D000610 ORTHO05D004774 3.8e-41 171.8 148 62.8
Sopen04g007980 Solanum pennellii HOM05D000610 ORTHO05D004774 5.0e-41 171.4 150 62.0
CAN.G676.30 Capsicum annuum HOM05D000610 ORTHO05D004774 8.5e-41 170.6 150 62.0
DCAR_020495 Daucus carota HOM05D000610 ORTHO05D004774 8.5e-41 170.6 154 62.3
Peaxi162Scf00130g00325 Petunia axillaris HOM05D000610 ORTHO05D004774 3.2e-40 168.7 152 60.5
SalBow6G0358 Salvia bowleyana HOM05D000610 ORTHO05D004774 3.6e-39 165.2 149 59.1
SalBow6G6580 Salvia bowleyana HOM05D000610 ORTHO05D004774 4.7e-39 164.9 149 59.1
ATR0188G019 Amborella trichopoda HOM05D000610 ORTHO05D004774 1.0e-38 163.7 156 55.8
Cpa.g.sc224.8 Carica papaya HOM05D000610 ORTHO05D004774 1.4e-38 163.3 141 62.4
Migut.J01749 Erythranthe guttata HOM05D000610 ORTHO05D004774 1.8e-38 162.9 149 58.4
MD14G1075500 Malus domestica HOM05D000610 ORTHO05D004774 1.8e-38 162.9 126 67.5
Nitab4.5_0002328g0010 Nicotiana tabacum HOM05D000610 ORTHO05D004774 6.7e-38 161.0 155 58.1
SGA_v2.0_scaffold69G23121 Striga asiatica HOM05D000610 ORTHO05D004774 2.6e-37 159.1 151 58.3
MSTRG.6422 Avicennia marina HOM05D000610 ORTHO05D004774 4.4e-37 158.3 150 61.3
HanXRQChr10g0300621 Helianthus annuus HOM05D000610 ORTHO05D004774 1.3e-36 156.8 150 58.7
Aa31LG1G23710 Aethionema arabicum HOM05D000610 ORTHO05D004774 4.8e-36 154.8 175 52.0
AUR62024461 Chenopodium quinoa HOM05D000610 ORTHO05D004774 4.8e-36 154.8 145 58.6
Aqoxy1G00231 Aquilegia oxysepala HOM05D000610 ORTHO05D004774 4.1e-35 151.8 150 55.3
Oeu023112.1 Olea europaea HOM05D000610 ORTHO05D004774 2.0e-34 149.4 163 55.8
Nitab4.5_0000586g0130 Nicotiana tabacum HOM05D000610 ORTHO05D004774 5.9e-34 147.9 142 56.3
CDE05G0129 Ceratophyllum demersum HOM05D000610 ORTHO05D004774 1.1e-32 143.7 151 52.3
HPP92_019408 Vanilla planifolia HOM05D000610 ORTHO05D004774 3.2e-32 142.1 149 50.3
CANSAT11G1161 Cannabis sativa HOM05D000610 ORTHO05D004774 1.2e-29 133.7 66 97.0
CANSAT11G2635 Cannabis sativa HOM05D000610 ORTHO05D004774 1.2e-29 133.7 66 97.0
CSS0003889 Camellia sinensis var. sinensis HOM05D000610 ORTHO05D004774 4.8e-28 128.3 231 39.0
CANSAT35G0242 Cannabis sativa HOM05D000610 ORTHO05D004774 6.3e-28 127.9 66 93.9
unitig_8.g3504 Utricularia gibba HOM05D000610 ORTHO05D004774 8.2e-28 127.5 150 49.3
Hma1.2p1_1280F.1_g272560 Hydrangea macrophylla HOM05D000610 ORTHO05D004774 7.0e-27 124.4 111 58.6
Ca_08444_v3 Cicer arietinum L. HOM05D000610 ORTHO05D004774 1.9e-24 116.3 64 84.4
Lju124C43G3 Lonicera japonica HOM05D000610 ORTHO05D004774 5.2e-22 108.2 64 81.2
SMO266G0031 Selaginella moellendorffii HOM05D000610 ORTHO05D004774 1.5e-21 106.7 161 43.5
Actinidia09319 Actinidia chinensis HOM05D000610 ORTHO05D004774 5.7e-21 104.8 147 44.9
MBI19_g13038_MAGBIO Magnolia biondii HOM05D000610 ORTHO05D004774 6.5e-17 91.3 57 71.9
MBI19_g35693_MAGBIO Magnolia biondii HOM05D000610 ORTHO05D004774 8.9e-14 80.9 86 54.7
Actinidia25937 Actinidia chinensis HOM05D003302 ORTHO05D003785 9.8e-13 77.4 58 67.2
arahy.Tifrunner.gnm1.ann1.624G49 Arachis hypogaea HOM05D000610 ORTHO05D004774 2.0e-10 69.7 54 66.7
MBI08_g41216_MAGBIO Magnolia biondii HOM05D000610 ORTHO05D004774 2.0e-10 69.7 88 48.9


User provided reference genes

Program Settings