Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G0143 Cannabis sativa HOM05D006167 ORTHO05D007635 2.5e-23 111.3 57 100.0
CANSAT78G0928 Cannabis sativa HOM05D006167 ORTHO05D007635 3.1e-18 94.4 57 84.2
Prupe.1G052700 Prunus persica HOM05D006167 ORTHO05D007635 1.3e-16 89.0 57 77.2
Cfa014825 Carpinus fangiana HOM05D006167 ORTHO05D007635 1.7e-16 88.6 58 81.0
ClCG06G007470 Citrullus lanatus HOM05D006167 ORTHO05D007635 5.0e-16 87.0 58 79.3
CsaV3_2G012210 Cucumis sativus L. HOM05D006167 ORTHO05D007635 5.0e-16 87.0 58 79.3
MELO3C023070.2 Cucumis melo HOM05D006167 ORTHO05D007635 6.5e-16 86.7 58 77.6
CiPaw.01G175200 Carya illinoinensis HOM05D006167 ORTHO05D007635 5.5e-15 83.6 58 75.9
Atru.chr4.1872 Acer truncatum HOM05D006167 ORTHO05D007635 7.2e-15 83.2 58 74.1
FvH4_4g05200 Fragaria vesca HOM05D006167 ORTHO05D007635 7.2e-15 83.2 55 76.4
Sed0006558 Sechium edule HOM05D006167 ORTHO05D007635 9.3e-15 82.8 58 75.9
Hma1.2p1_0112F.1_g054980 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 1.2e-14 82.4 57 73.7
Lalb_Chr03g0036881 Lupinus albus HOM05D006167 ORTHO05D007635 1.2e-14 82.4 57 71.9
Potri.008G174000 Populus trichocarpa HOM05D006167 ORTHO05D007635 1.6e-14 82.0 58 74.1
FAN12G1688 Fragaria x ananassa HOM05D006167 ORTHO05D007635 2.7e-14 81.3 55 74.5
FAN17G0547 Fragaria x ananassa HOM05D006167 ORTHO05D007635 2.7e-14 81.3 55 74.5
Glyma.20G081600 Glycine max HOM05D006167 ORTHO05D007635 4.6e-14 80.5 58 74.1
Potri.010G063100 Populus trichocarpa HOM05D006167 ORTHO05D007635 4.6e-14 80.5 58 74.1
Cpa.g.sc59.38 Carica papaya HOM05D006167 ORTHO05D007635 1.0e-13 79.3 58 69.0
CSS0017011 Camellia sinensis var. sinensis HOM05D006167 ORTHO05D007635 3.0e-13 77.8 58 69.0
CSS0046609 Camellia sinensis var. sinensis HOM05D006167 ORTHO05D007635 3.0e-13 77.8 58 69.0
Eucgr.H02882 Eucalyptus grandis HOM05D006167 ORTHO05D007635 3.0e-13 77.8 59 69.5
Lj4g0015547 Lotus japonicus HOM05D006167 ORTHO05D007635 3.0e-13 77.8 59 74.6
PGR004G2513 Punica granatum HOM05D006167 ORTHO05D007635 3.9e-13 77.4 58 69.0
Actinidia32969 Actinidia chinensis HOM05D006167 ORTHO05D007635 6.7e-13 76.6 60 68.3
RcHm_v2.0_Chr4g0396111 Rosa chinensis HOM05D006167 ORTHO05D007635 6.7e-13 76.6 56 67.9
Ca_00011_v3 Cicer arietinum L. HOM05D006167 ORTHO05D007635 8.8e-13 76.3 58 67.2
THA.LOC109117012 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 1.9e-12 75.1 58 65.5
Hma1.2p1_0432F.1_g151790 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 2.5e-12 74.7 58 69.0
Nn1g03031 Nelumbo nucifera HOM05D006167 ORTHO05D007635 3.3e-12 74.3 56 64.3
THA.LOC109116489 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 3.3e-12 74.3 58 63.8
THA.LOC109116515 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 3.3e-12 74.3 58 63.8
TWI09G0967 Tripterygium wilfordii HOM05D006167 ORTHO05D007635 4.3e-12 73.9 58 63.8
Dinv29784 Davidia involucrata HOM05D006167 ORTHO05D007635 5.7e-12 73.6 58 67.2
Hma1.2p1_0014F.1_g009760 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 7.4e-12 73.2 58 67.2
Ca_26216_v3 Cicer arietinum L. HOM05D006167 ORTHO05D007635 9.7e-12 72.8 58 63.8
EL10Ac3g06721 Beta vulgaris HOM05D006167 ORTHO05D007635 1.3e-11 72.4 58 63.8
Lsat_1_v5_gn_1_76160 Lactuca sativa HOM05D006167 ORTHO05D007635 1.3e-11 72.4 60 63.3
Psat6g109400 Pisum sativum HOM05D006167 ORTHO05D007635 1.3e-11 72.4 58 60.3
TPR.G23974 Trifolium pratense HOM05D006167 ORTHO05D007635 1.3e-11 72.4 57 61.4
HanXRQChr13g0410431 Helianthus annuus HOM05D006167 ORTHO05D007635 1.7e-11 72.0 60 61.7
Hma1.2p1_0144F.1_g065120 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 2.2e-11 71.6 58 65.5
Nitab4.5_0000867g0070 Nicotiana tabacum HOM05D006167 ORTHO05D007635 2.2e-11 71.6 58 65.5
TAR362G1146 Trochodendron aralioides HOM05D006167 ORTHO05D007635 2.2e-11 71.6 56 64.3
AL7G43090 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 2.8e-11 71.2 58 60.3
Carub.0007s2902 Capsella rubella HOM05D006167 ORTHO05D007635 2.8e-11 71.2 58 62.1
AT4G13520 Arabidopsis thaliana HOM05D006167 ORTHO05D007635 6.3e-11 70.1 58 58.6
COL.COLO4_16007 Corchorus olitorius HOM05D006167 ORTHO05D007635 8.2e-11 69.7 58 69.0
Sp7g11110 Schrenkiella parvula HOM05D006167 ORTHO05D007635 8.2e-11 69.7 58 58.6
Thecc.04G269200 Theobroma cacao HOM05D006167 ORTHO05D007635 8.2e-11 69.7 58 69.0
Aa31LG9G4150 Aethionema arabicum HOM05D006167 ORTHO05D007635 1.1e-10 69.3 59 57.6
Cc03_g06850 Coffea canephora HOM05D006167 ORTHO05D007635 1.1e-10 69.3 62 62.9
Thhalv10026745m.g Eutrema salsugineum HOM05D006167 ORTHO05D007635 1.1e-10 69.3 58 60.3
BcaB04g17822 Brassica carinata HOM05D006167 ORTHO05D007635 1.8e-10 68.6 58 56.9
BcaC07g37498 Brassica carinata HOM05D006167 ORTHO05D007635 1.8e-10 68.6 58 56.9
A08p07960 Brassica napus HOM05D006167 ORTHO05D007635 1.8e-10 68.6 58 56.9
BolC8t47817H Brassica oleracea HOM05D006167 ORTHO05D007635 1.8e-10 68.6 58 56.9
BraA08t32818Z Brassica rapa HOM05D006167 ORTHO05D007635 1.8e-10 68.6 58 56.9
Solyc12g097040.1 Solanum lycopersicum HOM05D006167 ORTHO05D007635 1.8e-10 68.6 60 58.3
Duzib052G0384 Durio zibethinus HOM05D006167 ORTHO05D007635 3.1e-10 67.8 58 67.2
Duzib052G0895 Durio zibethinus HOM05D006167 ORTHO05D007635 3.1e-10 67.8 58 67.2
Duzib266G0005 Durio zibethinus HOM05D006167 ORTHO05D007635 3.1e-10 67.8 58 67.2
arahy.Tifrunner.gnm1.ann1.C36CE0 Arachis hypogaea HOM05D000254 ORTHO05D000165 4.1e-10 67.4 47 78.7
CAN.G566.4 Capsicum annuum HOM05D006167 ORTHO05D007635 4.1e-10 67.4 62 61.3
Oeu012938.1 Olea europaea HOM05D006167 ORTHO05D007635 4.1e-10 67.4 60 63.3
Gohir.D02G050200 Gossypium hirsutum HOM05D006167 ORTHO05D007635 5.3e-10 67.0 58 67.2
Dinv18834 Davidia involucrata HOM05D006167 ORTHO05D007635 9.1e-10 66.2 58 67.2
Gohir.D05G314750 Gossypium hirsutum HOM05D006167 ORTHO05D007635 9.1e-10 66.2 58 69.0
DCAR_027359 Daucus carota HOM05D006167 ORTHO05D007635 1.2e-09 65.9 59 61.0
CARHR219150 Cardamine hirsuta HOM05D006167 ORTHO05D007635 1.5e-09 65.5 58 55.2
Gohir.D08G110800 Gossypium hirsutum HOM05D006167 ORTHO05D007635 2.0e-09 65.1 58 67.2
Gorai.004G118700 Gossypium raimondii HOM05D006167 ORTHO05D007635 2.6e-09 64.7 58 67.2
Gorai.012G072500 Gossypium raimondii HOM05D006167 ORTHO05D007635 2.6e-09 64.7 58 67.2
SalBow3G0251 Salvia bowleyana HOM05D006167 ORTHO05D007635 2.6e-09 64.7 61 62.3
SalBow3G4531 Salvia bowleyana HOM05D006167 ORTHO05D007635 2.6e-09 64.7 61 62.3
SalBow5G4407 Salvia bowleyana HOM05D006167 ORTHO05D007635 2.6e-09 64.7 61 62.3
SalBow5G4759 Salvia bowleyana HOM05D006167 ORTHO05D007635 2.6e-09 64.7 61 62.3
Rhsim09G0043900 Rhododendron simsii HOM05D006167 ORTHO05D007635 3.4e-09 64.3 54 64.8
SalBow5G0916 Salvia bowleyana HOM05D006167 ORTHO05D007635 3.4e-09 64.3 60 61.7
SalBow5G2020 Salvia bowleyana HOM05D006167 ORTHO05D007635 3.4e-09 64.3 60 61.7
Gohir.D11G199000 Gossypium hirsutum HOM05D006167 ORTHO05D007635 4.5e-09 63.9 58 65.5
AL5G12040 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 7.7e-09 63.2 58 55.2
AL5G12300 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 7.7e-09 63.2 58 55.2
Gohir.D04G064600 Gossypium hirsutum HOM05D006167 ORTHO05D007635 1.0e-08 62.8 58 67.2
Migut.N00323 Erythranthe guttata HOM05D006167 ORTHO05D007635 1.3e-08 62.4 61 59.0
Gohir.D08G046000 Gossypium hirsutum HOM05D006167 ORTHO05D007635 1.3e-08 62.4 58 65.5
Gorai.008G094700 Gossypium raimondii HOM05D006167 ORTHO05D007635 1.3e-08 62.4 58 65.5
Gorai.011G155100 Gossypium raimondii HOM05D006167 ORTHO05D007635 1.3e-08 62.4 58 65.5
Sc19g0005700 Simmondsia chinensis HOM05D006167 ORTHO05D007635 1.3e-08 62.4 58 60.3
SHI00872 Sapria himalayana HOM05D006167 ORTHO05D007635 1.7e-08 62.0 53 58.5
unitig_744.g24610 Utricularia gibba HOM05D006167 ORTHO05D007635 1.7e-08 62.0 61 57.4
AUR62035353 Chenopodium quinoa HOM05D006167 ORTHO05D007635 2.2e-08 61.6 54 63.0
Gohir.D09G064700 Gossypium hirsutum HOM05D006167 ORTHO05D007635 2.9e-08 61.2 58 63.8
Gohir.D12G087200 Gossypium hirsutum HOM05D006167 ORTHO05D007635 2.9e-08 61.2 58 58.6
Gorai.009G336300 Gossypium raimondii HOM05D006167 ORTHO05D007635 2.9e-08 61.2 58 63.8
vmacro15491 Vaccinium macrocarpon HOM05D006167 ORTHO05D007635 2.9e-08 61.2 57 54.4
vmacro22827 Vaccinium macrocarpon HOM05D006167 ORTHO05D007635 2.9e-08 61.2 57 54.4
Aqoxy5G00097 Aquilegia oxysepala HOM05D006167 ORTHO05D007635 3.8e-08 60.8 56 60.7
Gorai.007G213200 Gossypium raimondii HOM05D006167 ORTHO05D007635 5.0e-08 60.5 58 63.8
Gorai.011G088300 Gossypium raimondii HOM05D006167 ORTHO05D007635 5.0e-08 60.5 58 63.8
SEGI_07901 Sequoiadendron giganteum HOM05D006167 ORTHO05D007635 8.5e-08 59.7 52 57.7
Gorai.008G097400 Gossypium raimondii HOM05D006167 ORTHO05D007635 1.1e-07 59.3 58 58.6
Lsat_1_v5_gn_2_42001 Lactuca sativa HOM05D006167 ORTHO05D007635 1.4e-07 58.9 59 55.9
ECA248G1405 Erigeron canadensis HOM05D006167 ORTHO05D007635 1.9e-07 58.5 72 47.2
Gohir.D03G098800 Gossypium hirsutum HOM05D006167 ORTHO05D007635 1.9e-07 58.5 58 60.3
Gorai.005G130300 Gossypium raimondii HOM05D006167 ORTHO05D007635 4.2e-07 57.4 58 62.1
Peaxi162Scf01007g00005 Petunia axillaris HOM05D006167 ORTHO05D007635 4.2e-07 57.4 66 47.0
Gohir.D04G080000 Gossypium hirsutum HOM05D006167 ORTHO05D007635 5.5e-07 57.0 58 60.3
Mapoly0016s0086 Marchantia polymorpha HOM05D006167 ORTHO05D007635 5.5e-07 57.0 51 60.8
Gohir.D01G140700 Gossypium hirsutum HOM05D006167 ORTHO05D007635 7.2e-07 56.6 58 60.3
Gohir.D10G139400 Gossypium hirsutum HOM05D006167 ORTHO05D007635 9.4e-07 56.2 58 60.3
A02p27890 Brassica napus HOM05D016819 ORTHO05D017546 1.2e-06 55.8 47 63.8
BraA02t07827Z Brassica rapa HOM05D016819 ORTHO05D017546 1.2e-06 55.8 47 63.8
Phvul.007G232600 Phaseolus vulgaris HOM05D006167 ORTHO05D007635 1.2e-06 55.8 58 56.9
Gohir.D02G123800 Gossypium hirsutum HOM05D006167 ORTHO05D007635 1.6e-06 55.5 58 60.3
Gorai.003G103700 Gossypium raimondii HOM05D006167 ORTHO05D007635 2.1e-06 55.1 58 56.9
SGA_v2.0_scaffold35G14127 Striga asiatica HOM05D006167 ORTHO05D007635 2.7e-06 54.7 61 50.8
BolC2t10448H Brassica oleracea HOM05D016819 ORTHO05D017546 4.7e-06 53.9 50 58.0


User provided reference genes

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