Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G0046 Cannabis sativa HOM05D004879 ORTHO05D008271 1.4e-139 499.6 250 100.0
Dinv15026 Davidia involucrata HOM05D004879 ORTHO05D008271 7.1e-91 337.8 234 71.8
Lalb_Chr04g0249461 Lupinus albus HOM05D004879 ORTHO05D008271 2.7e-90 335.9 235 69.4
Gorai.013G107000 Gossypium raimondii HOM05D004879 ORTHO05D008271 1.7e-89 333.2 250 67.6
Actinidia07011 Actinidia chinensis HOM05D004879 ORTHO05D008271 2.3e-89 332.8 242 70.7
Gohir.D03G062100 Gossypium hirsutum HOM05D004879 ORTHO05D008271 5.1e-89 331.6 250 67.2
Rhsim13G0203600 Rhododendron simsii HOM05D004879 ORTHO05D008271 6.6e-89 331.3 250 68.4
CiPaw.13G145200 Carya illinoinensis HOM05D004879 ORTHO05D008271 1.1e-88 330.5 250 66.4
Cpa.g.sc36.59 Carica papaya HOM05D004879 ORTHO05D008271 1.5e-88 330.1 227 71.8
LjContig00564g0012926 Lotus japonicus HOM05D004879 ORTHO05D008271 1.5e-88 330.1 242 69.4
Cfa007603 Carpinus fangiana HOM05D004879 ORTHO05D008271 2.5e-88 329.3 229 72.1
Phvul.008G205100 Phaseolus vulgaris HOM05D004879 ORTHO05D008271 2.5e-88 329.3 242 69.0
Haze_14485 Corylus avellana HOM05D004879 ORTHO05D008271 3.3e-88 328.9 229 70.7
QL01p020549 Quercus lobata HOM05D004879 ORTHO05D008271 3.3e-88 328.9 248 67.3
Potri.001G224400 Populus trichocarpa HOM05D004879 ORTHO05D008271 4.3e-88 328.6 249 65.9
VMungo0647G0171 Vigna mungo HOM05D004879 ORTHO05D008271 5.6e-88 328.2 229 71.2
AT1G21840 Arabidopsis thaliana HOM05D004879 ORTHO05D008271 7.3e-88 327.8 232 70.7
Gohir.A02G109100 Gossypium hirsutum HOM05D004879 ORTHO05D008271 1.2e-87 327.0 229 71.6
Nitab4.5_0005379g0030 Nicotiana tabacum HOM05D004879 ORTHO05D008271 1.6e-87 326.6 233 68.2
Carub.0001s2129 Capsella rubella HOM05D004879 ORTHO05D008271 2.8e-87 325.9 250 66.4
Cc00_g20630 Coffea canephora HOM05D004879 ORTHO05D008271 3.6e-87 325.5 229 71.6
TPR.G14628 Trifolium pratense HOM05D004879 ORTHO05D008271 3.6e-87 325.5 229 69.9
Ca_06172_v3 Cicer arietinum L. HOM05D004879 ORTHO05D008271 4.7e-87 325.1 229 69.9
Glyma.14G039400 Glycine max HOM05D004879 ORTHO05D008271 4.7e-87 325.1 229 69.4
Lj1P989T20 Lonicera japonica HOM05D004879 ORTHO05D008271 4.7e-87 325.1 234 68.8
Glyma.02G276400 Glycine max HOM05D004879 ORTHO05D008271 6.2e-87 324.7 250 64.8
Migut.F00393 Erythranthe guttata HOM05D004879 ORTHO05D008271 8.1e-87 324.3 249 65.9
Peaxi162Scf00192g00042 Petunia axillaris HOM05D004879 ORTHO05D008271 4.0e-86 322.0 233 68.2
AL1G35040 Arabidopsis lyrata HOM05D004879 ORTHO05D008271 5.2e-86 321.6 250 66.0
Nitab4.5_0000832g0030 Nicotiana tabacum HOM05D004879 ORTHO05D008271 5.2e-86 321.6 233 67.4
Psat0s4349g0080 Pisum sativum HOM05D004879 ORTHO05D008271 8.9e-86 320.9 229 69.4
Ciclev10002295m.g Citrus clementina HOM05D004879 ORTHO05D008271 1.2e-85 320.5 250 64.8
DCAR_018145 Daucus carota HOM05D004879 ORTHO05D008271 1.5e-85 320.1 229 69.4
Duzib041G0713 Durio zibethinus HOM05D004879 ORTHO05D008271 1.5e-85 320.1 229 69.9
Psat0s2829g0160 Pisum sativum HOM05D004879 ORTHO05D008271 1.5e-85 320.1 229 69.0
TWI31G0278 Tripterygium wilfordii HOM05D004879 ORTHO05D008271 1.5e-85 320.1 232 68.5
Eucgr.B03769 Eucalyptus grandis HOM05D004879 ORTHO05D008271 2.0e-85 319.7 250 66.8
TWI79G1014 Tripterygium wilfordii HOM05D004879 ORTHO05D008271 2.0e-85 319.7 232 67.2
CAN.G1097.5 Capsicum annuum HOM05D004879 ORTHO05D008271 2.6e-85 319.3 233 67.0
CARHR022120 Cardamine hirsuta HOM05D004879 ORTHO05D008271 4.4e-85 318.5 228 70.6
Medtr5g088570 Medicago truncatula HOM05D004879 ORTHO05D008271 7.6e-85 317.8 250 63.2
PGR102G1558 Punica granatum HOM05D004879 ORTHO05D008271 7.6e-85 317.8 250 63.2
Sabra16G0133100 Salix brachista HOM05D004879 ORTHO05D008271 7.6e-85 317.8 234 66.7
FvH4_2g00490 Fragaria vesca HOM05D004879 ORTHO05D008271 1.7e-84 316.6 250 65.2
Solyc03g031430.1 Solanum lycopersicum HOM05D004879 ORTHO05D008271 2.2e-84 316.2 248 62.9
Sp1g19390 Schrenkiella parvula HOM05D004879 ORTHO05D008271 2.9e-84 315.8 250 65.6
Sopen03g005320 Solanum pennellii HOM05D004879 ORTHO05D008271 2.9e-84 315.8 248 62.9
BcaC06g34908 Brassica carinata HOM05D004879 ORTHO05D008271 6.4e-84 314.7 233 67.8
C07p21890 Brassica napus HOM05D004879 ORTHO05D008271 6.4e-84 314.7 233 67.8
C07p21910 Brassica napus HOM05D004879 ORTHO05D008271 6.4e-84 314.7 233 67.8
BolC7t42723H Brassica oleracea HOM05D004879 ORTHO05D008271 6.4e-84 314.7 233 67.8
Thhalv10009605m.g Eutrema salsugineum HOM05D004879 ORTHO05D008271 6.4e-84 314.7 246 64.6
BraA07t29233Z Brassica rapa HOM05D004879 ORTHO05D008271 8.4e-84 314.3 233 67.8
BcaB08g37376 Brassica carinata HOM05D004879 ORTHO05D008271 1.1e-83 313.9 232 67.7
BcaB08g37377 Brassica carinata HOM05D004879 ORTHO05D008271 1.1e-83 313.9 232 67.7
A07p14910 Brassica napus HOM05D004879 ORTHO05D008271 1.4e-83 313.5 233 67.8
RcHm_v2.0_Chr6g0250811 Rosa chinensis HOM05D004879 ORTHO05D008271 1.9e-83 313.2 234 67.1
MELO3C004190.2 Cucumis melo HOM05D004879 ORTHO05D008271 2.4e-83 312.8 227 68.3
Sc06g0004840 Simmondsia chinensis HOM05D004879 ORTHO05D008271 2.4e-83 312.8 250 59.6
COL.COLO4_35490 Corchorus olitorius HOM05D004879 ORTHO05D008271 5.4e-83 311.6 250 63.2
Nn7g37079 Nelumbo nucifera HOM05D004879 ORTHO05D008271 7.1e-83 311.2 242 64.9
PGSC0003DMG400024255 Solanum tuberosum HOM05D004879 ORTHO05D008271 7.1e-83 311.2 243 63.0
SGA_v2.0_scaffold2G01091 Striga asiatica HOM05D004879 ORTHO05D008271 7.1e-83 311.2 228 67.1
Aqoxy1G01328 Aquilegia oxysepala HOM05D004879 ORTHO05D008271 9.3e-83 310.8 250 64.4
Manes.01G175400 Manihot esculenta HOM05D004879 ORTHO05D008271 9.3e-83 310.8 234 66.2
Sed0013542 Sechium edule HOM05D004879 ORTHO05D008271 9.3e-83 310.8 229 66.4
RcHm_v2.0_Chr6g0250481 Rosa chinensis HOM05D004879 ORTHO05D008271 1.6e-82 310.1 234 65.8
unitig_37.g12512 Utricularia gibba HOM05D004879 ORTHO05D008271 2.1e-82 309.7 227 66.1
MBI13_g10954_MAGBIO Magnolia biondii HOM05D004879 ORTHO05D008271 7.8e-82 307.8 250 63.6
AUR62000245 Chenopodium quinoa HOM05D004879 ORTHO05D008271 2.3e-81 306.2 235 63.8
ClCG02G014970 Citrullus lanatus HOM05D004879 ORTHO05D008271 2.3e-81 306.2 227 69.2
PSO384G4586 Papaver somniferum HOM05D004879 ORTHO05D008271 3.9e-81 305.4 250 63.6
PSO339G6668 Papaver somniferum HOM05D004879 ORTHO05D008271 5.1e-81 305.1 250 62.8
CsaV3_2G007030 Cucumis sativus L. HOM05D004879 ORTHO05D008271 6.6e-81 304.7 227 67.4
Aa31LG7G5930 Aethionema arabicum HOM05D004879 ORTHO05D008271 1.9e-80 303.1 233 67.0
CSS0042269 Camellia sinensis var. sinensis HOM05D004879 ORTHO05D008271 1.9e-80 303.1 250 63.6
EL10Ac4g10052 Beta vulgaris HOM05D004879 ORTHO05D008271 3.3e-80 302.4 248 61.3
FAN24G3181 Fragaria x ananassa HOM05D004879 ORTHO05D008271 4.3e-80 302.0 244 63.9
BcaC06g34909 Brassica carinata HOM05D004879 ORTHO05D008271 5.6e-80 301.6 233 66.5
ATR0782G197 Amborella trichopoda HOM05D004879 ORTHO05D008271 7.3e-80 301.2 229 65.9
ECA240G2819 Erigeron canadensis HOM05D004879 ORTHO05D008271 2.4e-78 296.2 233 63.5
CDE10G1192 Ceratophyllum demersum HOM05D004879 ORTHO05D008271 5.3e-78 295.0 229 63.3
MD10G1003100 Malus domestica HOM05D004879 ORTHO05D008271 1.2e-77 293.9 282 57.4
Os02g0168000 Oryza sativa ssp. japonica HOM05D004879 ORTHO05D008271 1.7e-76 290.0 243 60.1
FAN27G1110 Fragaria x ananassa HOM05D004879 ORTHO05D008271 3.8e-76 288.9 222 65.8
Prupe.8G030900 Prunus persica HOM05D004879 ORTHO05D008271 4.6e-74 282.0 279 56.3
Zm00001eb232950 Zea mays HOM05D004879 ORTHO05D008271 6.0e-74 281.6 233 61.8
HPP92_011765 Vanilla planifolia HOM05D004879 ORTHO05D008271 7.9e-74 281.2 234 60.7
SalBow4G0907 Salvia bowleyana HOM05D004879 ORTHO05D008271 1.8e-70 270.0 202 65.3
Atru.chr3.2942 Acer truncatum HOM05D004879 ORTHO05D008271 5.3e-70 268.5 219 60.7
MSTRG.8775 Avicennia marina HOM05D004879 ORTHO05D008271 9.3e-67 257.7 236 59.7
FAN06G1945 Fragaria x ananassa HOM05D004879 ORTHO05D008271 2.1e-66 256.5 200 65.5
MD12G1125200 Malus domestica HOM05D000005 ORTHO05D000012 7.9e-66 254.6 216 62.0
SEGI_07822 Sequoiadendron giganteum HOM05D004879 ORTHO05D008271 1.3e-65 253.8 234 55.6
Hma1.2p1_1843F.1_g305050 Hydrangea macrophylla HOM05D004879 ORTHO05D008271 1.8e-65 253.4 195 68.2
SMO137G0182 Selaginella moellendorffii HOM05D004879 ORTHO05D008271 2.8e-63 246.1 232 54.3
Mapoly0075s0047 Marchantia polymorpha HOM05D004879 ORTHO05D008271 7.9e-58 228.0 232 51.3
MD12G1125400 Malus domestica HOM05D004879 ORTHO05D008271 2.5e-56 223.0 180 66.1
Pp3c21_1390 Physcomitrium patens HOM05D004879 ORTHO05D008271 1.4e-54 217.2 236 51.7
Thecc.08G138700 Theobroma cacao HOM05D004879 ORTHO05D008271 3.1e-54 216.1 156 69.2
arahy.Tifrunner.gnm1.ann1.V07RCD Arachis hypogaea HOM05D004879 ORTHO05D008271 2.0e-53 213.4 243 49.4
arahy.Tifrunner.gnm1.ann1.WGUK12 Arachis hypogaea HOM05D004879 ORTHO05D008271 1.1e-51 207.6 244 48.4
CBR_g70735 Chara braunii HOM05D004879 ORTHO05D008271 1.3e-44 184.1 283 40.6
HPP92_011772 Vanilla planifolia HOM05D004879 ORTHO05D008271 1.4e-43 180.6 160 57.5
RcHm_v2.0_Chr1g0323071 Rosa chinensis HOM05D004879 ORTHO05D008271 9.4e-43 177.9 143 62.9
GSVIVG01037361001 Vitis vinifera HOM05D004879 ORTHO05D008271 3.0e-41 172.9 250 42.4
Oeu030259.1 Olea europaea HOM05D004879 ORTHO05D008271 4.4e-40 169.1 245 40.8
arahy.Tifrunner.gnm1.ann1.4BAK6K Arachis hypogaea HOM05D004879 ORTHO05D009754 6.3e-39 165.2 204 47.1
RcHm_v2.0_Chr1g0322261 Rosa chinensis HOM05D004879 ORTHO05D008271 5.3e-38 162.2 133 63.2
SHI10553 Sapria himalayana HOM05D004879 ORTHO05D008271 3.8e-36 156.0 229 40.2
Actinidia37185 Actinidia chinensis HOM05D004879 ORTHO05D008271 2.5e-35 153.3 202 47.5
MCO04G443 Micromonas commoda HOM05D004879 ORTHO05D008271 1.4e-30 137.5 266 37.6
CBR_g27954 Chara braunii HOM05D004879 ORTHO05D008271 2.0e-29 133.7 179 44.7
RcHm_v2.0_Chr1g0322441 Rosa chinensis HOM05D004879 ORTHO05D008271 7.0e-22 108.6 80 62.5
FAN24G2371 Fragaria x ananassa HOM05D004879 ORTHO05D000038 5.9e-21 105.5 118 54.2
RcHm_v2.0_Chr1g0322591 Rosa chinensis HOM05D004879 ORTHO05D008271 1.2e-16 91.3 61 65.6
RcHm_v2.0_Chr1g0322271 Rosa chinensis HOM05D004879 ORTHO05D008271 5.4e-14 82.4 53 69.8
arahy.Tifrunner.gnm1.ann1.0GE5DD Arachis hypogaea HOM05D004879 ORTHO05D008271 7.7e-13 78.6 51 66.7
RcHm_v2.0_Chr1g0322581 Rosa chinensis HOM05D004879 ORTHO05D008271 1.3e-12 77.8 69 62.3
PRCOL_00002215 Prasinoderma coloniale HOM05D005590 ORTHO05D007084 5.0e-12 75.9 213 30.5
RcHm_v2.0_Chr1g0322461 Rosa chinensis HOM05D004879 ORTHO05D008271 4.7e-10 69.3 47 68.1
arahy.Tifrunner.gnm1.ann1.4Q1DLP Arachis hypogaea HOM05D004879 ORTHO05D008271 1.7e-07 60.8 47 51.1
RcHm_v2.0_Chr1g0322541 Rosa chinensis HOM05D004879 ORTHO05D008271 3.7e-07 59.7 50 56.0
unitig_46.g18777 Utricularia gibba HOM05D004879 ORTHO05D425869 7.0e-06 55.5 39 64.1


User provided reference genes

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