Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G0006 Cannabis sativa HOM05D006157 ORTHO05D007826 6.5e-114 414.1 210 100.0
Prupe.1G438800 Prunus persica HOM05D006157 ORTHO05D007826 2.1e-59 233.0 209 58.4
Cfa018525 Carpinus fangiana HOM05D006157 ORTHO05D007826 8.7e-58 227.6 202 56.9
Haze_17545 Corylus avellana HOM05D006157 ORTHO05D007826 8.7e-58 227.6 201 57.7
Haze_17554 Corylus avellana HOM05D006157 ORTHO05D007826 8.7e-58 227.6 201 57.7
Potri.002G127800 Populus trichocarpa HOM05D006157 ORTHO05D007826 8.7e-58 227.6 211 55.9
CiPaw.15G061800 Carya illinoinensis HOM05D006157 ORTHO05D007826 3.6e-56 222.2 206 57.8
MD15G1085000 Malus domestica HOM05D006157 ORTHO05D007826 1.2e-54 217.2 209 56.0
Gorai.010G017900 Gossypium raimondii HOM05D006157 ORTHO05D007826 2.0e-54 216.5 217 52.5
Gohir.D06G015100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 2.6e-54 216.1 217 52.5
QL02p005407 Quercus lobata HOM05D006157 ORTHO05D007826 3.4e-54 215.7 206 56.3
TWI56G1258 Tripterygium wilfordii HOM05D006157 ORTHO05D007826 3.4e-54 215.7 214 53.7
FAN15G3536 Fragaria x ananassa HOM05D006157 ORTHO05D007826 4.4e-54 215.3 214 56.1
Ciclev10002442m.g Citrus clementina HOM05D006157 ORTHO05D007826 1.7e-53 213.4 219 54.8
Gohir.A06G017000 Gossypium hirsutum HOM05D006157 ORTHO05D007826 1.7e-53 213.4 217 52.5
Potri.014G032300 Populus trichocarpa HOM05D006157 ORTHO05D007826 4.9e-53 211.8 212 52.8
Sabra14G0022700 Salix brachista HOM05D006157 ORTHO05D007826 4.9e-53 211.8 205 53.7
Manes.18G032700 Manihot esculenta HOM05D006157 ORTHO05D007826 1.1e-52 210.7 209 59.8
RcHm_v2.0_Chr6g0307431 Rosa chinensis HOM05D006157 ORTHO05D007826 1.1e-52 210.7 209 55.5
MELO3C010885.2 Cucumis melo HOM05D006157 ORTHO05D007826 9.3e-52 207.6 212 53.8
Ca_13302_v3 Cicer arietinum L. HOM05D006157 ORTHO05D007826 1.6e-51 206.8 200 55.5
Duzib116G0710 Durio zibethinus HOM05D006157 ORTHO05D007826 2.7e-51 206.1 216 52.3
Atru.chr13.647 Acer truncatum HOM05D006157 ORTHO05D007826 4.6e-51 205.3 218 53.7
CsaV3_2G028070 Cucumis sativus L. HOM05D006157 ORTHO05D007826 6.0e-51 204.9 212 52.8
Eucgr.F00242 Eucalyptus grandis HOM05D006157 ORTHO05D007826 7.8e-51 204.5 211 56.9
Psat6g012720 Pisum sativum HOM05D006157 ORTHO05D007826 1.7e-50 203.4 202 53.5
Sed0006561 Sechium edule HOM05D006157 ORTHO05D007826 1.9e-49 199.9 203 51.2
FAN20G0621 Fragaria x ananassa HOM05D006157 ORTHO05D007826 2.5e-49 199.5 215 53.0
Gorai.005G103500 Gossypium raimondii HOM05D006157 ORTHO05D007826 3.3e-49 199.1 208 51.9
Lj5g0002869 Lotus japonicus HOM05D006157 ORTHO05D007826 3.3e-49 199.1 206 51.5
Gohir.D02G092100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 7.3e-49 198.0 208 51.9
Sed0015883 Sechium edule HOM05D006157 ORTHO05D007826 7.3e-49 198.0 213 52.6
Medtr1g019800 Medicago truncatula HOM05D006157 ORTHO05D007826 1.6e-48 196.8 203 54.2
Glyma.06G038400 Glycine max HOM05D006157 ORTHO05D007826 3.6e-48 195.7 198 57.6
Gohir.A03G079324 Gossypium hirsutum HOM05D006157 ORTHO05D007826 4.8e-48 195.3 208 50.5
VMungo0647G0691 Vigna mungo HOM05D006157 ORTHO05D007826 4.8e-48 195.3 193 58.0
FAN27G0611 Fragaria x ananassa HOM05D006157 ORTHO05D007826 8.1e-48 194.5 215 52.1
FvH4_2g34660 Fragaria vesca HOM05D006157 ORTHO05D007826 1.8e-47 193.4 216 51.4
Cpa.g.c24415.4 Carica papaya HOM05D006157 ORTHO05D007826 4.0e-47 192.2 212 51.4
Actinidia23263 Actinidia chinensis HOM05D006157 ORTHO05D007826 6.9e-47 191.4 216 49.1
Lalb_Chr14g0368791 Lupinus albus HOM05D006157 ORTHO05D007826 6.9e-47 191.4 196 52.0
TPR.G13684 Trifolium pratense HOM05D006157 ORTHO05D007826 9.0e-47 191.0 203 53.2
Phvul.001G020800 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 1.2e-46 190.7 194 58.8
TAR628G1181 Trochodendron aralioides HOM05D006157 ORTHO05D007826 1.2e-46 190.7 209 55.5
GSVIVG01009525001 Vitis vinifera HOM05D006157 ORTHO05D007826 1.5e-46 190.3 210 56.7
PGR083G2028 Punica granatum HOM05D006157 ORTHO05D007826 3.4e-46 189.1 205 56.6
MD08G1103700 Malus domestica HOM05D006157 ORTHO05D007826 4.5e-46 188.7 210 49.0
ClCG08G015710 Citrullus lanatus HOM05D006157 ORTHO05D007826 5.8e-46 188.3 196 52.6
CSS0004131 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 1.3e-45 187.2 225 50.7
Glyma.04G037500 Glycine max HOM05D006157 ORTHO05D007826 1.7e-45 186.8 197 56.9
Phvul.009G063700 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 6.4e-45 184.9 196 55.6
VMungo1309G0335 Vigna mungo HOM05D006157 ORTHO05D007826 1.9e-44 183.3 199 54.8
Hma1.2p1_0718F.1_g208450 Hydrangea macrophylla HOM05D006157 ORTHO05D007826 2.4e-44 183.0 202 48.0
Manes.05G171900 Manihot esculenta HOM05D006157 ORTHO05D007826 2.4e-44 183.0 208 48.6
Manes.05G171901 Manihot esculenta HOM05D006157 ORTHO05D007826 2.4e-44 183.0 208 48.6
Nn5g30225 Nelumbo nucifera HOM05D006157 ORTHO05D007826 7.1e-44 181.4 218 50.0
Dinv35975 Davidia involucrata HOM05D006157 ORTHO05D007826 1.2e-43 180.6 221 53.4
Glyma.14G081800 Glycine max HOM05D006157 ORTHO05D007826 4.3e-41 172.2 199 55.8
Glyma.17G243500 Glycine max HOM05D006157 ORTHO05D007826 4.3e-41 172.2 200 56.5
Nitab4.5_0001101g0070 Nicotiana tabacum HOM05D006157 ORTHO05D007826 4.3e-41 172.2 203 44.8
Nitab4.5_0000686g0050 Nicotiana tabacum HOM05D006157 ORTHO05D007826 7.4e-41 171.4 195 46.7
Peaxi162Scf00064g00125 Petunia axillaris HOM05D006157 ORTHO05D007826 1.6e-40 170.2 206 48.5
THA.LOC104806945 Tarenaya hassleriana HOM05D006157 ORTHO05D007826 1.1e-39 167.5 212 46.7
Thecc.08G011200 Theobroma cacao HOM05D006157 ORTHO05D007826 6.9e-39 164.9 159 54.1
Sopen04g032780 Solanum pennellii HOM05D006157 ORTHO05D007826 1.2e-38 164.1 204 44.1
EL10Ac1g01781 Beta vulgaris HOM05D006157 ORTHO05D007826 4.5e-38 162.2 236 41.1
PGSC0003DMG400036180 Solanum tuberosum HOM05D006157 ORTHO05D007826 7.6e-38 161.4 204 44.1
Nn1g05836 Nelumbo nucifera HOM05D006157 ORTHO05D007826 1.7e-37 160.2 208 45.7
MBI02_g17343_MAGBIO Magnolia biondii HOM05D006157 ORTHO05D007826 2.9e-37 159.5 205 41.0
AUR62022432 Chenopodium quinoa HOM05D006157 ORTHO05D007826 8.4e-37 157.9 229 41.0
MSTRG.25101 Avicennia marina HOM05D006157 ORTHO05D007826 4.2e-36 155.6 207 48.8
Nitab4.5_0004184g0060 Nicotiana tabacum HOM05D006157 ORTHO05D007890 5.5e-36 155.2 197 45.7
vmacro21540 Vaccinium macrocarpon HOM05D006157 ORTHO05D007826 1.2e-35 154.1 214 41.6
Lj4C53T12 Lonicera japonica HOM05D006157 ORTHO05D007826 7.9e-35 151.4 202 50.5
Nitab4.5_0000453g0220 Nicotiana tabacum HOM05D006157 ORTHO05D007890 1.3e-34 150.6 196 43.4
Aqoxy6G01361 Aquilegia oxysepala HOM05D006157 ORTHO05D007826 3.9e-34 149.1 209 48.8
Solyc04g079170.4 Solanum lycopersicum HOM05D006157 ORTHO05D007826 8.7e-34 147.9 190 44.2
Lsat_1_v5_gn_4_124041 Lactuca sativa HOM05D006157 ORTHO05D007826 4.3e-33 145.6 217 39.2
Rhsim06G0048100 Rhododendron simsii HOM05D006157 ORTHO05D007826 5.7e-33 145.2 218 45.0
ECA232G2668 Erigeron canadensis HOM05D006157 ORTHO05D007826 7.4e-33 144.8 206 46.6
AUR62039307 Chenopodium quinoa HOM05D006157 ORTHO05D007826 1.6e-32 143.7 221 39.8
Peaxi162Scf00528g00414 Petunia axillaris HOM05D006157 ORTHO05D007826 2.1e-32 143.3 184 41.3
Cc10_g04340 Coffea canephora HOM05D006157 ORTHO05D007826 8.2e-32 141.4 237 38.8
PSO541G3363 Papaver somniferum HOM05D006157 ORTHO05D007826 6.5e-29 131.7 223 42.2
Ah.05g168840 Amaranthus hybridus HOM05D006157 ORTHO05D007826 1.1e-28 131.0 188 40.4
HanXRQChr09g0267931 Helianthus annuus HOM05D006157 ORTHO05D007826 3.2e-28 129.4 220 39.1
SGA_v2.0_scaffold14G07032 Striga asiatica HOM05D006157 ORTHO05D007826 3.5e-27 125.9 204 42.6
Sopen12g030790 Solanum pennellii HOM05D006157 ORTHO05D007826 1.0e-26 124.4 205 35.6
Aa31sc924G20 Aethionema arabicum HOM05D006157 ORTHO05D007826 2.3e-26 123.2 208 38.9
COL.COLO4_26474 Corchorus olitorius HOM05D006157 ORTHO05D007826 2.3e-26 123.2 209 38.3
DCAR_011305 Daucus carota HOM05D005231 ORTHO05D006387 6.7e-26 121.7 152 42.8
AL1G53700 Arabidopsis lyrata HOM05D006157 ORTHO05D007826 1.9e-25 120.2 204 36.8
SalBow8G3379 Salvia bowleyana HOM05D006157 ORTHO05D007826 3.3e-25 119.4 209 36.8
CARHR037020 Cardamine hirsuta HOM05D006157 ORTHO05D007826 4.8e-24 115.5 189 40.2
Thhalv10011797m.g Eutrema salsugineum HOM05D006157 ORTHO05D007826 6.3e-24 115.2 211 35.5
Carub.0001s3622 Capsella rubella HOM05D006157 ORTHO05D007826 1.8e-23 113.6 212 35.8
Sp1g34500 Schrenkiella parvula HOM05D006157 ORTHO05D007826 3.1e-23 112.8 189 38.1
SpUn0102_0020 Schrenkiella parvula HOM05D006157 ORTHO05D007826 3.1e-23 112.8 189 38.1
Sc02g0007020 Simmondsia chinensis HOM05D006157 ORTHO05D007826 3.1e-23 112.8 230 37.4
BcaB07g33839 Brassica carinata HOM05D006157 ORTHO05D007826 5.3e-23 112.1 193 38.3
Solyc12g088890.3 Solanum lycopersicum HOM05D006157 ORTHO05D007890 9.0e-23 111.3 167 40.7
AT1G47410 Arabidopsis thaliana HOM05D006157 ORTHO05D007826 1.5e-22 110.5 197 36.5
BolSC99t61279H Brassica oleracea HOM05D006157 ORTHO05D007826 2.6e-22 109.8 193 39.4
AUR62019555 Chenopodium quinoa HOM05D006157 ORTHO05D007826 2.6e-22 109.8 166 41.0
PGSC0003DMG400015419 Solanum tuberosum HOM05D006157 ORTHO05D007826 2.6e-22 109.8 136 44.1
C06p01910 Brassica napus HOM05D006157 ORTHO05D007826 7.7e-22 108.2 193 39.4
arahy.Tifrunner.gnm1.ann1.HUL940 Arachis hypogaea HOM05D006157 ORTHO05D007826 1.0e-21 107.8 208 43.8
arahy.Tifrunner.gnm1.ann1.R9H0NA Arachis hypogaea HOM05D006157 ORTHO05D007826 1.0e-21 107.8 208 43.8
A10p06400 Brassica napus HOM05D006157 ORTHO05D007826 1.0e-21 107.8 193 38.9
Migut.C00597 Erythranthe guttata HOM05D006157 ORTHO05D007826 4.2e-20 102.4 204 37.3
Duzib093G2157 Durio zibethinus HOM05D006157 ORTHO05D007826 3.6e-19 99.4 104 52.9
Migut.N02699 Erythranthe guttata HOM05D006157 ORTHO05D007826 6.1e-19 98.6 225 33.3
PSO675G5393 Papaver somniferum HOM05D006157 ORTHO05D007826 6.1e-19 98.6 160 41.9
Actinidia22616 Actinidia chinensis HOM05D006157 ORTHO05D007826 7.9e-19 98.2 169 38.5
BcaC08g42947 Brassica carinata HOM05D006157 ORTHO05D007826 1.3e-16 90.9 190 33.2
ATR0100G006 Amborella trichopoda HOM05D006157 ORTHO05D007826 2.2e-13 80.1 178 30.9
Zm00001eb315050 Zea mays HOM05D006157 ORTHO05D007826 4.2e-12 75.9 220 27.3
CSS0005922 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 5.5e-12 75.5 137 34.3
ATR0100G061 Amborella trichopoda HOM05D006157 ORTHO05D007826 7.2e-12 75.1 181 30.4
unitig_22.g6773 Utricularia gibba HOM05D006157 ORTHO05D007826 1.1e-09 67.8 172 29.7
FvH4_2g34701 Fragaria vesca HOM05D006157 ORTHO05D007826 3.3e-09 66.2 114 39.5
HPP92_027520 Vanilla planifolia HOM05D006157 ORTHO05D007826 2.8e-08 63.2 149 33.6
Zm00001eb100900 Zea mays HOM05D006157 ORTHO05D007826 1.2e-06 57.8 39 56.4
SalBow8G4867 Salvia bowleyana HOM05D006157 ORTHO05D007826 4.5e-06 55.8 35 65.7
Os09g0460100 Oryza sativa ssp. japonica HOM05D006157 ORTHO05D007826 5.9e-06 55.5 39 53.8


User provided reference genes

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