Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G2044 Cannabis sativa HOM05D006797 ORTHO05D007696 5.5e-52 207.6 124 100.0
RcHm_v2.0_Chr5g0021541 Rosa chinensis HOM05D006797 ORTHO05D007696 2.5e-28 129.0 124 66.1
MD10G1226000 Malus domestica HOM05D006797 ORTHO05D007696 7.5e-25 117.5 124 62.9
Prupe.4G119300 Prunus persica HOM05D006797 ORTHO05D007696 7.5e-25 117.5 124 61.3
CiPaw.10G107100 Carya illinoinensis HOM05D006797 ORTHO05D007696 1.1e-23 113.6 115 58.3
CsaV3_6G053080 Cucumis sativus L. HOM05D006797 ORTHO05D007696 1.2e-22 110.2 127 60.6
ClCG01G025860 Citrullus lanatus HOM05D006797 ORTHO05D007696 2.7e-22 109.0 125 58.4
MELO3C007002.2 Cucumis melo HOM05D006797 ORTHO05D007696 7.7e-22 107.5 127 60.6
Manes.03G071800 Manihot esculenta HOM05D006797 ORTHO05D007696 1.3e-21 106.7 124 56.5
QL11p011767 Quercus lobata HOM05D006797 ORTHO05D007696 1.3e-21 106.7 112 57.1
Sed0011432 Sechium edule HOM05D006797 ORTHO05D007696 2.2e-21 105.9 124 57.3
GSVIVG01012170001 Vitis vinifera HOM05D006797 ORTHO05D007696 2.9e-21 105.5 127 49.6
Gorai.010G130400 Gossypium raimondii HOM05D006797 ORTHO05D007696 8.5e-21 104.0 111 58.6
Ciclev10017227m.g Citrus clementina HOM05D006797 ORTHO05D007696 1.1e-20 103.6 110 59.1
Gohir.A06G110200 Gossypium hirsutum HOM05D006797 ORTHO05D007696 1.1e-20 103.6 111 57.7
Atru.chr10.261 Acer truncatum HOM05D006797 ORTHO05D007696 4.2e-20 101.7 110 53.6
Gohir.D06G114100 Gossypium hirsutum HOM05D006797 ORTHO05D007696 4.2e-20 101.7 111 57.7
arahy.Tifrunner.gnm1.ann1.30I9D2 Arachis hypogaea HOM05D006797 ORTHO05D007696 5.5e-20 101.3 124 57.3
arahy.Tifrunner.gnm1.ann1.3X9X11 Arachis hypogaea HOM05D006797 ORTHO05D007696 5.5e-20 101.3 124 57.3
MSTRG.8842 Avicennia marina HOM05D006797 ORTHO05D007696 7.2e-20 100.9 125 52.8
EL10Ac7g17249 Beta vulgaris HOM05D006797 ORTHO05D007696 1.2e-19 100.1 124 54.0
Cpa.g.sc30.90 Carica papaya HOM05D006797 ORTHO05D007696 1.2e-19 100.1 106 57.5
Lalb_Chr07g0188191 Lupinus albus HOM05D006797 ORTHO05D007696 1.6e-19 99.8 124 54.8
Cc09_g04790 Coffea canephora HOM05D006797 ORTHO05D007696 2.1e-19 99.4 122 56.6
Duzib211G0055 Durio zibethinus HOM05D006797 ORTHO05D007696 2.1e-19 99.4 111 58.6
Phvul.002G187600 Phaseolus vulgaris HOM05D006797 ORTHO05D007696 2.1e-19 99.4 110 57.3
TAR626G0010 Trochodendron aralioides HOM05D006797 ORTHO05D007696 2.1e-19 99.4 128 51.6
FAN16G2513 Fragaria x ananassa HOM05D006797 ORTHO05D007696 3.6e-19 98.6 124 56.5
Glyma.08G089600 Glycine max HOM05D006797 ORTHO05D007696 3.6e-19 98.6 110 59.1
Lsat_1_v5_gn_3_103300 Lactuca sativa HOM05D006797 ORTHO05D007696 3.6e-19 98.6 111 56.8
FAN21G4013 Fragaria x ananassa HOM05D006797 ORTHO05D007696 4.7e-19 98.2 124 55.6
FAN25G1182 Fragaria x ananassa HOM05D006797 ORTHO05D007696 6.1e-19 97.8 124 55.6
Glyma.05G134500 Glycine max HOM05D006797 ORTHO05D007696 6.1e-19 97.8 111 58.6
Sc24g0002860 Simmondsia chinensis HOM05D006797 ORTHO05D007696 6.1e-19 97.8 110 56.4
TPR.G27392 Trifolium pratense HOM05D006797 ORTHO05D007696 8.0e-19 97.4 125 56.0
FvH4_3g13200 Fragaria vesca HOM05D006797 ORTHO05D007696 1.0e-18 97.1 124 55.6
FAN11G3985 Fragaria x ananassa HOM05D006797 ORTHO05D007696 1.0e-18 97.1 124 55.6
Ah.15g091850 Amaranthus hybridus HOM05D006797 ORTHO05D007696 2.3e-18 95.9 125 53.6
Hma1.2p1_1220F.1_g268030 Hydrangea macrophylla HOM05D006797 ORTHO05D007696 2.3e-18 95.9 116 57.8
Medtr4g094782 Medicago truncatula HOM05D006797 ORTHO05D007696 2.3e-18 95.9 124 53.2
PGR042G0784 Punica granatum HOM05D006797 ORTHO05D007696 2.3e-18 95.9 116 56.9
TWI38G0311 Tripterygium wilfordii HOM05D006797 ORTHO05D007696 2.3e-18 95.9 124 50.8
CSS0049260 Camellia sinensis var. sinensis HOM05D006797 ORTHO05D007696 2.6e-17 92.4 125 48.8
Migut.F00519 Erythranthe guttata HOM05D006797 ORTHO05D007696 4.4e-17 91.7 111 52.3
Psat7g087040 Pisum sativum HOM05D006797 ORTHO05D007696 5.7e-17 91.3 126 51.6
VMungo0251G2933 Vigna mungo HOM05D006797 ORTHO05D007696 5.7e-17 91.3 108 56.5
Hund23985 Selenicereus undatus HOM05D006797 ORTHO05D007696 1.7e-16 89.7 100 59.0
COL.COLO4_25039 Corchorus olitorius HOM05D006797 ORTHO05D007696 2.2e-16 89.4 100 59.0
Ca_18220_v3 Cicer arietinum L. HOM05D006797 ORTHO05D007696 2.8e-16 89.0 108 54.6
PSO541G4265 Papaver somniferum HOM05D006797 ORTHO05D007696 8.3e-16 87.4 123 47.2
SGA_v2.0_scaffold60G20810 Striga asiatica HOM05D006797 ORTHO05D007696 1.1e-15 87.0 110 50.9
PSO675G1942 Papaver somniferum HOM05D006797 ORTHO05D007696 1.8e-15 86.3 123 46.3
Oeu036765.2 Olea europaea HOM05D006797 ORTHO05D007696 3.1e-15 85.5 131 46.6
Potri.003G155400 Populus trichocarpa HOM05D006797 ORTHO05D007696 5.4e-15 84.7 129 47.3
SGA_v2.0_scaffold44G16576 Striga asiatica HOM05D001006 ORTHO05D000868 5.4e-15 84.7 110 51.8
Rhsim13G0134800 Rhododendron simsii HOM05D006797 ORTHO05D007696 1.2e-14 83.6 117 46.2
ECA248G3234 Erigeron canadensis HOM05D006797 ORTHO05D007696 2.0e-14 82.8 110 50.9
CDE05G1867 Ceratophyllum demersum HOM05D006797 ORTHO05D007696 3.5e-14 82.0 111 47.7
HanXRQChr12g0377351 Helianthus annuus HOM05D006797 ORTHO05D007696 7.7e-14 80.9 110 50.0
Haze_24216 Corylus avellana HOM05D006797 ORTHO05D007696 1.0e-13 80.5 133 42.9
Dinv03172 Davidia involucrata HOM05D006797 ORTHO05D007696 1.7e-13 79.7 110 49.1
Aa31LG6G12300 Aethionema arabicum HOM05D006797 ORTHO05D007696 2.9e-13 79.0 112 49.1
Lj4g0013366 Lotus japonicus HOM05D006797 ORTHO05D007696 3.8e-13 78.6 105 56.2
ATR0763G022 Amborella trichopoda HOM05D006797 ORTHO05D007696 5.0e-13 78.2 108 48.1
Aqoxy3G03581 Aquilegia oxysepala HOM05D006409 ORTHO05D008250 5.0e-13 78.2 113 47.8
AUR62042807 Chenopodium quinoa HOM05D006797 ORTHO05D007696 6.5e-13 77.8 124 47.6
THA.LOC104812696 Tarenaya hassleriana HOM05D006797 ORTHO05D007696 8.5e-13 77.4 120 52.5
BcaC07g37796 Brassica carinata HOM05D006797 ORTHO05D007696 1.9e-12 76.3 110 50.9
A08p10910 Brassica napus HOM05D006797 ORTHO05D007696 1.9e-12 76.3 110 50.9
Dinv02379 Davidia involucrata HOM05D006797 ORTHO05D007696 2.5e-12 75.9 111 47.7
AL1G45170 Arabidopsis lyrata HOM05D006797 ORTHO05D007696 5.5e-12 74.7 113 48.7
CAN.G809.30 Capsicum annuum HOM05D006797 ORTHO05D007696 5.5e-12 74.7 112 52.7
DCAR_001265 Daucus carota HOM05D006797 ORTHO05D007696 5.5e-12 74.7 100 52.0
SalBow3G3973 Salvia bowleyana HOM05D006797 ORTHO05D007696 5.5e-12 74.7 110 47.3
Nn1g05854 Nelumbo nucifera HOM05D006797 ORTHO05D007696 1.6e-11 73.2 105 50.5
Haze_05201 Corylus avellana HOM05D000001 ORTHO05D010268 2.7e-11 72.4 49 81.6
Haze_15747 Corylus avellana HOM05D006797 ORTHO05D007696 2.7e-11 72.4 49 81.6
unitig_37.g11921 Utricularia gibba HOM05D006797 ORTHO05D007696 2.7e-11 72.4 67 65.7
vmacro03563 Vaccinium macrocarpon HOM05D006797 ORTHO05D007696 2.7e-11 72.4 77 59.7
BraA08t33088Z Brassica rapa HOM05D006797 ORTHO05D007696 3.6e-11 72.0 113 50.4
Thhalv10009126m.g Eutrema salsugineum HOM05D006797 ORTHO05D007696 8.0e-11 70.9 113 49.6
Solyc02g082020.3 Solanum lycopersicum HOM05D006797 ORTHO05D007696 1.0e-10 70.5 112 49.1
PGSC0003DMG400007337 Solanum tuberosum HOM05D006797 ORTHO05D007696 1.4e-10 70.1 113 50.4
AT1G30880 Arabidopsis thaliana HOM05D006797 ORTHO05D007696 1.8e-10 69.7 113 50.4
Nitab4.5_0000632g0020 Nicotiana tabacum HOM05D006797 ORTHO05D007696 1.8e-10 69.7 112 48.2
Sabra03G0112800 Salix brachista HOM05D006797 ORTHO05D007696 1.8e-10 69.7 56 69.6
Sopen02g026660 Solanum pennellii HOM05D006797 ORTHO05D007696 1.8e-10 69.7 112 48.2
BolC8t48187H Brassica oleracea HOM05D006797 ORTHO05D007696 3.0e-10 68.9 111 46.8
Carub.0001s2922 Capsella rubella HOM05D006797 ORTHO05D007696 3.0e-10 68.9 111 50.5
Nitab4.5_0003902g0030 Nicotiana tabacum HOM05D006797 ORTHO05D007696 4.0e-10 68.6 112 48.2
Peaxi162Scf00036g02019 Petunia axillaris HOM05D006797 ORTHO05D007696 4.0e-10 68.6 112 49.1
MBI18_g20922_MAGBIO Magnolia biondii HOM05D006797 ORTHO05D007696 6.8e-10 67.8 103 46.6
Zm00001eb430680 Zea mays HOM05D006797 ORTHO05D007696 8.8e-10 67.4 111 44.1
CARHR030370 Cardamine hirsuta HOM05D006797 ORTHO05D007696 1.2e-09 67.0 115 49.6
Zm00001eb442340 Zea mays HOM05D006797 ORTHO05D007696 1.2e-09 67.0 97 46.4
BcaB04g18200 Brassica carinata HOM05D006797 ORTHO05D007696 2.0e-09 66.2 115 47.8
BcaB07g32754 Brassica carinata HOM05D006797 ORTHO05D007696 2.6e-09 65.9 113 48.7
Thecc.02G002300 Theobroma cacao HOM05D006797 ORTHO05D007696 3.4e-09 65.5 60 66.7
Sp1g26780 Schrenkiella parvula HOM05D006797 ORTHO05D007696 5.7e-09 64.7 114 48.2
HPP92_013198 Vanilla planifolia HOM05D006797 ORTHO05D007696 5.7e-09 64.7 114 47.4
Zm00001eb071100 Zea mays HOM05D006797 ORTHO05D007696 9.8e-09 63.9 111 43.2
BcaC05g27127 Brassica carinata HOM05D006797 ORTHO05D007696 1.3e-08 63.5 113 46.9
C05p30120 Brassica napus HOM05D006797 ORTHO05D007696 1.3e-08 63.5 113 46.9
C07p14730 Brassica napus HOM05D006797 ORTHO05D007696 1.3e-08 63.5 113 47.8
BolC7t41975H Brassica oleracea HOM05D006797 ORTHO05D007696 1.3e-08 63.5 113 47.8
A09p35270 Brassica napus HOM05D006797 ORTHO05D007696 1.7e-08 63.2 110 48.2
Hma1.2p1_0747F.1_g212490 Hydrangea macrophylla HOM05D006797 ORTHO05D007696 2.8e-08 62.4 71 59.2
Os04g0611300 Oryza sativa ssp. japonica HOM05D006797 ORTHO05D007696 6.3e-08 61.2 111 43.2
Pp3c24_14860 Physcomitrium patens HOM05D006797 ORTHO05D007696 8.3e-08 60.8 111 41.4
A07p09570 Brassica napus HOM05D006797 ORTHO05D007696 1.1e-07 60.5 110 46.4
BraA07t28751Z Brassica rapa HOM05D006797 ORTHO05D007696 1.1e-07 60.5 110 46.4
BraA09t39054Z Brassica rapa HOM05D006797 ORTHO05D007696 1.8e-07 59.7 114 44.7
BolC5t31749H Brassica oleracea HOM05D006797 ORTHO05D007696 7.7e-06 54.3 119 42.9


User provided reference genes

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