Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G1982 Cannabis sativa HOM05D007799 ORTHO05D009854 4.3e-147 524.6 264 100.0
Prupe.4G085700 Prunus persica HOM05D007799 ORTHO05D009854 9.1e-89 330.9 259 65.3
MD05G1279400 Malus domestica HOM05D007799 ORTHO05D009854 1.8e-84 316.6 258 63.2
QL05p055084 Quercus lobata HOM05D007799 ORTHO05D009854 3.0e-84 315.8 248 66.9
FvH4_3g05030 Fragaria vesca HOM05D007799 ORTHO05D009854 4.0e-84 315.5 259 63.3
RcHm_v2.0_Chr5g0014941 Rosa chinensis HOM05D007799 ORTHO05D009854 6.8e-84 314.7 259 62.5
FAN25G3832 Fragaria x ananassa HOM05D007799 ORTHO05D009854 8.8e-84 314.3 259 62.9
FAN11G0145 Fragaria x ananassa HOM05D007799 ORTHO05D009854 1.2e-83 313.9 259 62.5
MD10G1258100 Malus domestica HOM05D007799 ORTHO05D009854 1.5e-83 313.5 256 63.3
Cfa000897 Carpinus fangiana HOM05D007799 ORTHO05D009854 2.6e-83 312.8 247 63.6
FAN16G3425 Fragaria x ananassa HOM05D007799 ORTHO05D009854 7.5e-83 311.2 258 62.4
FAN21G3556 Fragaria x ananassa HOM05D007799 ORTHO05D009854 1.3e-82 310.5 259 62.2
Manes.15G125000 Manihot esculenta HOM05D007799 ORTHO05D009854 7.0e-81 304.7 252 63.1
CiPaw.10G088800 Carya illinoinensis HOM05D007799 ORTHO05D009854 1.3e-79 300.4 255 61.6
Duzib192G0648 Durio zibethinus HOM05D007799 ORTHO05D009854 2.1e-77 293.1 252 59.9
Thecc.06G144300 Theobroma cacao HOM05D007799 ORTHO05D009854 2.1e-77 293.1 252 61.1
COL.COLO4_31009 Corchorus olitorius HOM05D007799 ORTHO05D009854 8.0e-77 291.2 224 65.6
Eucgr.D00266 Eucalyptus grandis HOM05D007799 ORTHO05D009854 1.4e-76 290.4 253 60.1
Duzib235G1165 Durio zibethinus HOM05D007799 ORTHO05D009854 3.0e-76 289.3 231 64.1
Glyma.13G221700 Glycine max HOM05D007799 ORTHO05D009854 4.0e-76 288.9 253 56.9
Potri.011G081701 Populus trichocarpa HOM05D007799 ORTHO05D009854 3.4e-75 285.8 221 65.6
Glyma.15G090500 Glycine max HOM05D007799 ORTHO05D009854 1.3e-74 283.9 253 56.1
Lj6g0006831 Lotus japonicus HOM05D007799 ORTHO05D009854 4.9e-74 282.0 252 57.1
Ca_00511_v3 Cicer arietinum L. HOM05D007799 ORTHO05D009854 6.4e-74 281.6 257 56.4
Medtr2g018670 Medicago truncatula HOM05D007799 ORTHO05D009854 2.4e-73 279.6 253 56.1
Lalb_Chr20g0117681 Lupinus albus HOM05D007799 ORTHO05D009854 4.1e-73 278.9 255 56.9
CiPaw.09G119600 Carya illinoinensis HOM05D007799 ORTHO05D009854 7.0e-73 278.1 248 58.5
Ciclev10016395m.g Citrus clementina HOM05D007799 ORTHO05D009854 1.2e-72 277.3 256 57.0
VMungo0540G2150 Vigna mungo HOM05D007799 ORTHO05D009854 1.2e-72 277.3 254 55.5
CSS0034958 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 1.6e-72 276.9 222 63.1
Rhsim13G0117700 Rhododendron simsii HOM05D007799 ORTHO05D009854 2.0e-72 276.6 224 61.6
Gohir.A06G196000 Gossypium hirsutum HOM05D007799 ORTHO05D009854 7.8e-72 274.6 216 64.8
PGSC0003DMG400002292 Solanum tuberosum HOM05D007799 ORTHO05D009854 7.8e-72 274.6 219 61.6
Gorai.010G237400 Gossypium raimondii HOM05D007799 ORTHO05D009854 1.3e-71 273.9 216 64.8
Psat1g192080 Pisum sativum HOM05D007799 ORTHO05D009854 1.3e-71 273.9 253 56.1
Atru.chr10.1081 Acer truncatum HOM05D007799 ORTHO05D009854 2.3e-71 273.1 217 62.7
Lalb_Chr15g0086631 Lupinus albus HOM05D007799 ORTHO05D009854 3.9e-71 272.3 248 56.5
TPR.G26257 Trifolium pratense HOM05D007799 ORTHO05D009854 3.9e-71 272.3 250 58.0
CSS0035706 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 8.6e-71 271.2 222 61.3
Gohir.D06G203500 Gossypium hirsutum HOM05D007799 ORTHO05D009854 3.3e-70 269.2 211 64.9
PGR083G2472 Punica granatum HOM05D007799 ORTHO05D009854 4.3e-70 268.9 222 60.4
Oeu032721.1 Olea europaea HOM05D007799 ORTHO05D009854 1.6e-69 266.9 224 58.5
Nitab4.5_0005655g0010 Nicotiana tabacum HOM05D007799 ORTHO05D009854 2.1e-69 266.5 241 57.3
Peaxi162Scf00045g02414 Petunia axillaris HOM05D007799 ORTHO05D009854 2.1e-69 266.5 240 55.0
arahy.Tifrunner.gnm1.ann1.NZ6SRJ Arachis hypogaea HOM05D007799 ORTHO05D009854 1.4e-68 263.8 258 52.7
arahy.Tifrunner.gnm1.ann1.80ML42 Arachis hypogaea HOM05D007799 ORTHO05D009854 1.8e-68 263.5 258 53.5
Haze_05684 Corylus avellana HOM05D007799 ORTHO05D009854 5.2e-68 261.9 247 56.7
Glyma.05G143400 Glycine max HOM05D007799 ORTHO05D009854 1.7e-66 256.9 247 53.8
Glyma.08G099800 Glycine max HOM05D007799 ORTHO05D009854 1.7e-66 256.9 247 54.3
VMungo0251G0945 Vigna mungo HOM05D007799 ORTHO05D009854 2.2e-66 256.5 245 54.7
DCAR_003890 Daucus carota HOM05D007799 ORTHO05D009854 2.4e-65 253.1 254 52.0
Oeu031191.1 Olea europaea HOM05D007799 ORTHO05D009854 3.2e-65 252.7 217 57.6
Cc00_g02020 Coffea canephora HOM05D007799 ORTHO05D009854 1.2e-64 250.8 230 54.8
Migut.K01168 Erythranthe guttata HOM05D007799 ORTHO05D009854 1.6e-64 250.4 211 57.3
Phvul.002G177900 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 1.6e-64 250.4 245 53.1
Medtr8g079475 Medicago truncatula HOM05D007799 ORTHO05D009854 6.6e-63 245.0 246 54.1
MBI02_g12199_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 1.5e-62 243.8 240 50.8
Lalb_Chr13g0294011 Lupinus albus HOM05D007799 ORTHO05D009854 2.5e-62 243.0 247 49.4
arahy.Tifrunner.gnm1.ann1.GW4I6G Arachis hypogaea HOM05D002205 ORTHO05D004847 2.3e-60 236.5 252 48.8
arahy.Tifrunner.gnm1.ann1.W0WEAA Arachis hypogaea HOM05D007799 ORTHO05D009854 2.3e-60 236.5 252 48.4
SalBow8G4130 Salvia bowleyana HOM05D007799 ORTHO05D009854 1.5e-59 233.8 226 52.7
vmacro03431 Vaccinium macrocarpon HOM05D007799 ORTHO05D009854 1.7e-58 230.3 242 52.9
MBI18_g11218_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 2.2e-58 229.9 248 49.2
Nitab4.5_0000315g0030 Nicotiana tabacum HOM05D007799 ORTHO05D009854 2.9e-58 229.6 241 52.7
GSVIVG01021549001 Vitis vinifera HOM05D007799 ORTHO05D009854 4.9e-58 228.8 235 54.9
HanXRQChr15g0482011 Helianthus annuus HOM05D007799 ORTHO05D009854 1.3e-55 220.7 243 47.3
Nn3g20329 Nelumbo nucifera HOM05D007799 ORTHO05D009854 1.3e-55 220.7 249 47.4
ClCG03G006490 Citrullus lanatus HOM05D007799 ORTHO05D009854 3.3e-54 216.1 237 51.1
CsaV3_1G036880 Cucumis sativus L. HOM05D007799 ORTHO05D009854 1.2e-53 214.2 223 51.6
Actinidia32344 Actinidia chinensis HOM05D007799 ORTHO05D009854 2.1e-53 213.4 204 56.4
Lsat_1_v5_gn_7_27461 Lactuca sativa HOM05D007799 ORTHO05D009854 3.6e-53 212.6 244 46.7
HanXRQChr04g0116571 Helianthus annuus HOM05D007799 ORTHO05D009854 6.2e-53 211.8 221 49.3
TAR624G0778 Trochodendron aralioides HOM05D007799 ORTHO05D009854 2.3e-52 209.9 168 61.9
ECA236G2997 Erigeron canadensis HOM05D007799 ORTHO05D009854 3.4e-51 206.1 204 51.0
HPP92_026553 Vanilla planifolia HOM05D007799 ORTHO05D009854 7.6e-51 204.9 234 42.3
Sed0012400 Sechium edule HOM05D007799 ORTHO05D009854 2.9e-50 203.0 215 52.6
Dinv32213 Davidia involucrata HOM05D007799 ORTHO05D009854 9.2e-49 198.0 184 62.0
DCAR_007872 Daucus carota HOM05D007799 ORTHO05D009854 2.1e-48 196.8 234 45.3
CDE12G0863 Ceratophyllum demersum HOM05D007799 ORTHO05D009854 7.8e-48 194.9 221 45.7
Phvul.006G168136 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 1.3e-47 194.1 201 52.7
TPR.G9572 Trifolium pratense HOM05D007799 ORTHO05D009854 4.0e-44 182.6 193 52.3
HPP92_028169 Vanilla planifolia HOM05D007799 ORTHO05D009854 3.4e-43 179.5 220 40.9
ATR1098G006 Amborella trichopoda HOM05D007799 ORTHO05D009854 7.1e-41 171.8 220 39.5
Sopen08g008720 Solanum pennellii HOM05D007799 ORTHO05D009854 9.3e-33 144.8 137 54.0
Solyc08g023510.3 Solanum lycopersicum HOM05D007799 ORTHO05D009854 2.3e-31 140.2 130 55.4
Lj1C1169G11 Lonicera japonica HOM05D002205 ORTHO05D004847 8.7e-31 138.3 91 71.4
MELO3C035703.2 Cucumis melo HOM05D007799 ORTHO05D009854 1.6e-29 134.0 178 43.8
TPR.G18987 Trifolium pratense HOM05D007799 ORTHO05D009854 2.0e-19 100.5 78 57.7
HPP92_026526 Vanilla planifolia HOM05D007799 ORTHO05D009854 3.2e-17 93.2 103 39.8
SEGI_29226 Sequoiadendron giganteum HOM05D007799 ORTHO05D009854 7.4e-14 82.0 173 30.1


User provided reference genes

Program Settings