Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G1909 Cannabis sativa HOM05D006801 ORTHO05D008490 1.7e-93 345.9 168 100.0
CiPaw.10G158900 Carya illinoinensis HOM05D006801 ORTHO05D008490 2.8e-75 285.4 169 80.5
QL07p034435 Quercus lobata HOM05D006801 ORTHO05D008490 1.4e-74 283.1 167 80.8
GSVIVG01030332001 Vitis vinifera HOM05D006801 ORTHO05D008490 1.0e-72 276.9 168 78.6
Haze_21041 Corylus avellana HOM05D006801 ORTHO05D008490 2.2e-72 275.8 168 78.6
Ciclev10012687m.g Citrus clementina HOM05D006801 ORTHO05D008490 1.1e-71 273.5 168 76.8
Nitab4.5_0005348g0010 Nicotiana tabacum HOM05D006801 ORTHO05D008490 1.1e-71 273.5 165 77.0
TWI74G0346 Tripterygium wilfordii HOM05D006801 ORTHO05D008490 3.2e-71 271.9 168 77.4
Lj2A70T41 Lonicera japonica HOM05D006801 ORTHO05D008490 5.5e-71 271.2 166 77.1
Eucgr.A00595 Eucalyptus grandis HOM05D006801 ORTHO05D008490 9.3e-71 270.4 168 76.8
CAN.G41.4 Capsicum annuum HOM05D006801 ORTHO05D008490 2.1e-70 269.2 164 76.8
Peaxi162Scf01132g00023 Petunia axillaris HOM05D006801 ORTHO05D008490 2.7e-70 268.9 165 75.8
Gorai.002G264900 Gossypium raimondii HOM05D006801 ORTHO05D008490 1.0e-69 266.9 167 73.1
PGR031G3867 Punica granatum HOM05D006801 ORTHO05D008490 1.3e-69 266.5 168 74.4
TAR140G0003 Trochodendron aralioides HOM05D006801 ORTHO05D008490 3.9e-69 265.0 168 75.0
TAR623G0428 Trochodendron aralioides HOM05D006801 ORTHO05D008490 3.9e-69 265.0 168 75.0
Atru.chr8.2288 Acer truncatum HOM05D006801 ORTHO05D008490 6.7e-69 264.2 163 75.5
Cfa017164 Carpinus fangiana HOM05D006801 ORTHO05D008490 6.7e-69 264.2 168 76.2
Cpa.g.sc120.28 Carica papaya HOM05D006801 ORTHO05D008490 2.5e-68 262.3 166 74.7
COL.COLO4_14495 Corchorus olitorius HOM05D006801 ORTHO05D008490 2.5e-68 262.3 165 73.3
Gohir.A01G228300 Gossypium hirsutum HOM05D006801 ORTHO05D008490 2.5e-68 262.3 167 71.9
Manes.09G108600 Manihot esculenta HOM05D006801 ORTHO05D008490 2.5e-68 262.3 166 74.1
Gohir.A04G094200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 3.3e-68 261.9 165 73.3
Prupe.6G281700 Prunus persica HOM05D006801 ORTHO05D008490 3.3e-68 261.9 167 73.1
HanXRQChr10g0291491 Helianthus annuus HOM05D006801 ORTHO05D008490 5.7e-68 261.2 165 72.7
Medtr4g017650 Medicago truncatula HOM05D006801 ORTHO05D008490 7.4e-68 260.8 166 73.5
CsaV3_3G033500 Cucumis sativus L. HOM05D006801 ORTHO05D008490 9.6e-68 260.4 164 76.2
Gorai.012G117400 Gossypium raimondii HOM05D006801 ORTHO05D008490 2.8e-67 258.8 165 72.1
Lj3g0017579 Lotus japonicus HOM05D006801 ORTHO05D008490 3.7e-67 258.5 166 73.5
Psat7g243680 Pisum sativum HOM05D006801 ORTHO05D008490 3.7e-67 258.5 166 71.1
DCAR_028865 Daucus carota HOM05D006801 ORTHO05D008490 8.2e-67 257.3 167 73.1
Thecc.05G010700 Theobroma cacao HOM05D006801 ORTHO05D008490 8.2e-67 257.3 165 71.5
Cc06_g01030 Coffea canephora HOM05D006801 ORTHO05D008490 1.1e-66 256.9 169 74.0
Gohir.D04G133600 Gossypium hirsutum HOM05D006801 ORTHO05D008490 1.4e-66 256.5 165 71.5
arahy.Tifrunner.gnm1.ann1.711CF1 Arachis hypogaea HOM05D006801 ORTHO05D008490 1.8e-66 256.1 166 72.3
arahy.Tifrunner.gnm1.ann1.SWS1EB Arachis hypogaea HOM05D006801 ORTHO05D008490 1.8e-66 256.1 166 72.9
Lsat_1_v5_gn_9_35501 Lactuca sativa HOM05D006801 ORTHO05D008490 2.4e-66 255.8 165 72.7
MD04G1161900 Malus domestica HOM05D006801 ORTHO05D008490 4.1e-66 255.0 167 71.9
ECA247G2271 Erigeron canadensis HOM05D006801 ORTHO05D008490 5.3e-66 254.6 167 71.3
ClCG10G022380 Citrullus lanatus HOM05D006801 ORTHO05D008490 6.9e-66 254.2 166 73.5
MELO3C009141.2 Cucumis melo HOM05D006801 ORTHO05D008490 1.2e-65 253.4 164 73.8
Sc01g0005740 Simmondsia chinensis HOM05D006801 ORTHO05D008490 2.0e-65 252.7 165 70.9
Aqoxy4G02453 Aquilegia oxysepala HOM05D006801 ORTHO05D008490 2.6e-65 252.3 169 72.2
Ca_20198_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 4.5e-65 251.5 166 69.9
THA.LOC104816206 Tarenaya hassleriana HOM05D006801 ORTHO05D008490 7.6e-65 250.8 168 70.8
Os05g0468800 Oryza sativa ssp. japonica HOM05D006801 ORTHO05D008490 1.0e-64 250.4 169 70.4
Oeu033563.1 Olea europaea HOM05D006801 ORTHO05D008490 1.3e-64 250.0 166 71.7
RcHm_v2.0_Chr3g0462371 Rosa chinensis HOM05D006801 ORTHO05D008490 3.8e-64 248.4 167 71.3
TPR.G8225 Trifolium pratense HOM05D006801 ORTHO05D008490 5.0e-64 248.1 166 69.3
Solyc09g005060.3 Solanum lycopersicum HOM05D006801 ORTHO05D008490 6.5e-64 247.7 167 72.5
Phvul.010G073500 Phaseolus vulgaris HOM05D006801 ORTHO05D008490 8.4e-64 247.3 165 73.9
Migut.J00126 Erythranthe guttata HOM05D006801 ORTHO05D008490 1.4e-63 246.5 167 69.5
PSO170G1048 Papaver somniferum HOM05D006801 ORTHO05D008490 1.4e-63 246.5 168 70.8
Nn2g13198 Nelumbo nucifera HOM05D006801 ORTHO05D008490 1.9e-63 246.1 169 71.0
Sopen09g001050 Solanum pennellii HOM05D006801 ORTHO05D008490 3.2e-63 245.4 167 71.9
VMungo0331G1898 Vigna mungo HOM05D006801 ORTHO05D008490 4.2e-63 245.0 167 72.5
Aa31LG1G22920 Aethionema arabicum HOM05D006801 ORTHO05D008490 1.2e-62 243.4 166 68.7
Potri.016G121000 Populus trichocarpa HOM05D006801 ORTHO05D008490 1.6e-62 243.0 166 70.5
ECA247G3879 Erigeron canadensis HOM05D006801 ORTHO05D008490 2.7e-62 242.3 167 68.9
Glyma.01G123100 Glycine max HOM05D006801 ORTHO05D008490 2.7e-62 242.3 167 70.1
MSTRG.18989 Avicennia marina HOM05D006801 ORTHO05D008490 6.1e-62 241.1 166 66.9
Carub.0006s0052 Capsella rubella HOM05D006801 ORTHO05D008490 6.1e-62 241.1 166 68.1
AUR62030790 Chenopodium quinoa HOM05D006801 ORTHO05D008490 7.9e-62 240.7 167 65.3
Lalb_Chr12g0207061 Lupinus albus HOM05D006801 ORTHO05D008490 1.0e-61 240.4 166 69.3
CARHR211660 Cardamine hirsuta HOM05D006801 ORTHO05D008490 1.3e-61 240.0 162 69.1
AUR62030503 Chenopodium quinoa HOM05D006801 ORTHO05D008490 8.7e-61 237.3 167 65.3
FvH4_6g11060 Fragaria vesca HOM05D006801 ORTHO05D008490 8.7e-61 237.3 168 68.5
FAN14G3154 Fragaria x ananassa HOM05D006801 ORTHO05D008490 8.7e-61 237.3 168 68.5
Sp6g40620 Schrenkiella parvula HOM05D006801 ORTHO05D008490 8.7e-61 237.3 161 68.3
PSO729G0120 Papaver somniferum HOM05D006801 ORTHO05D008490 1.5e-60 236.5 171 69.0
Glyma.03G052200 Glycine max HOM05D006801 ORTHO05D008490 1.9e-60 236.1 167 67.7
AL6G10870 Arabidopsis lyrata HOM05D006801 ORTHO05D008490 4.3e-60 235.0 166 66.9
EL10Ac5g12521 Beta vulgaris HOM05D006801 ORTHO05D008490 4.3e-60 235.0 167 64.1
BraA10t45402Z Brassica rapa HOM05D006801 ORTHO05D008490 4.3e-60 235.0 161 68.3
BcaC06g31972 Brassica carinata HOM05D006801 ORTHO05D008490 7.4e-60 234.2 163 66.9
Ah.12g058900 Amaranthus hybridus HOM05D006801 ORTHO05D008490 1.1e-58 230.3 166 66.3
AT5G01300 Arabidopsis thaliana HOM05D006801 ORTHO05D008490 3.1e-58 228.8 166 64.5
PSO729G0014 Papaver somniferum HOM05D006801 ORTHO05D008490 4.1e-58 228.4 170 67.1
PSO724G0025 Papaver somniferum HOM05D006801 ORTHO05D008490 6.9e-58 227.6 170 66.5
SGA_v2.0_scaffold85G26712 Striga asiatica HOM05D000053 ORTHO05D008490 1.2e-57 226.9 163 65.6
SalBow5G2624 Salvia bowleyana HOM05D006801 ORTHO05D008490 2.0e-57 226.1 163 64.4
SalBow5G4248 Salvia bowleyana HOM05D006801 ORTHO05D008490 2.6e-57 225.7 163 64.4
CSS0028234 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 1.7e-56 223.0 168 65.5
Zm00001eb351790 Zea mays HOM05D006801 ORTHO05D008490 4.2e-55 218.4 172 65.7
unitig_26.g9083 Utricularia gibba HOM05D006801 ORTHO05D008490 4.6e-54 214.9 157 66.2
C09p74590 Brassica napus HOM05D005640 ORTHO05D007124 8.8e-53 210.7 142 69.0
Lalb_Chr07g0191271 Lupinus albus HOM05D006801 ORTHO05D008490 2.0e-52 209.5 142 69.0
A10p33680 Brassica napus HOM05D005640 ORTHO05D007124 7.4e-52 207.6 142 68.3
Sed0001867 Sechium edule HOM05D006801 ORTHO05D008490 9.7e-52 207.2 168 63.1
Medtr4g017680 Medicago truncatula HOM05D006801 ORTHO05D008490 2.8e-51 205.7 170 61.2
Nitab4.5_0000539g0120 Nicotiana tabacum HOM05D006801 ORTHO05D008490 2.8e-51 205.7 122 75.4
HPP92_026978 Vanilla planifolia HOM05D006801 ORTHO05D008490 3.7e-51 205.3 168 59.5
Thhalv10014869m.g Eutrema salsugineum HOM05D006801 ORTHO05D008490 8.2e-51 204.1 162 62.3
FAN09G2180 Fragaria x ananassa HOM05D006801 ORTHO05D008490 8.2e-51 204.1 144 67.4
SEGI_01937 Sequoiadendron giganteum HOM05D006801 ORTHO05D008490 3.1e-50 202.2 165 56.4
HPP92_015418 Vanilla planifolia HOM05D006801 ORTHO05D008490 1.5e-49 199.9 168 58.3
MBI15_g30116_MAGBIO Magnolia biondii HOM05D006801 ORTHO05D008490 2.6e-49 199.1 143 66.4
Dinv18520 Davidia involucrata HOM05D006801 ORTHO05D008490 3.4e-49 198.7 130 76.9
VMungo0331G1841 Vigna mungo HOM05D006801 ORTHO05D008490 1.4e-47 193.4 170 59.4
Lj3g0026162 Lotus japonicus HOM05D006801 ORTHO05D008490 1.9e-47 193.0 172 59.9
Lalb_Chr12g0207091 Lupinus albus HOM05D006801 ORTHO05D008490 1.6e-46 189.9 170 57.6
Mapoly0003s0041 Marchantia polymorpha HOM05D006801 ORTHO05D008490 1.1e-44 183.7 162 51.9
CBR_g39562 Chara braunii HOM05D006801 ORTHO05D008490 5.7e-44 181.4 166 49.4
Gohir.D01G218200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 2.2e-43 179.5 119 68.9
CDE08G0176 Ceratophyllum demersum HOM05D006801 ORTHO05D008490 3.7e-43 178.7 156 57.1
CSS0011838 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 4.8e-43 178.3 170 54.7
SMO347G0428 Selaginella moellendorffii HOM05D006801 ORTHO05D008490 4.8e-43 178.3 163 55.2
Pp3c1_41520 Physcomitrium patens HOM05D006801 ORTHO05D008490 3.1e-42 175.6 162 52.5
arahy.Tifrunner.gnm1.ann1.M4T34S Arachis hypogaea HOM05D006801 ORTHO05D008490 1.1e-39 167.2 177 52.0
AagrBONN_evm.TU.Sc2ySwM_228.3494 Anthoceros agrestis HOM05D006801 ORTHO05D008490 2.0e-36 156.4 145 53.1
Pp3c21_8040 Physcomitrium patens HOM05D006801 ORTHO05D008490 6.5e-32 141.4 157 47.8
Ca_20197_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 3.2e-31 139.0 169 46.7
PGSC0003DMG400006267 Solanum tuberosum HOM05D006801 ORTHO05D008490 1.2e-28 130.6 86 74.4
ATR0681G271 Amborella trichopoda HOM05D006801 ORTHO05D008490 3.4e-28 129.0 89 70.8
arahy.Tifrunner.gnm1.ann1.1WC97K Arachis hypogaea HOM05D006801 ORTHO05D008490 8.3e-27 124.4 130 50.0
Hma1.2p1_0501F.1_g167640 Hydrangea macrophylla HOM05D006801 ORTHO05D008490 1.1e-26 124.0 107 57.9
Prupe.1G005200 Prunus persica HOM05D006801 ORTHO05D008490 7.5e-20 101.3 154 43.5
ATR0681G235 Amborella trichopoda HOM05D006801 ORTHO05D008490 5.0e-16 88.6 51 72.5
Actinidia20750 Actinidia chinensis HOM05D006801 ORTHO05D008490 1.1e-10 70.9 122 37.7
FAN05G3081 Fragaria x ananassa HOM05D000734 ORTHO05D002223 2.0e-09 66.6 40 75.0


User provided reference genes

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