Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G1785 Cannabis sativa HOM05D005843 ORTHO05D007781 1.2e-294 1015.8 522 100.0
RcHm_v2.0_Chr3g0466751 Rosa chinensis HOM05D005843 ORTHO05D007781 2.8e-206 722.2 523 70.7
Prupe.6G254200 Prunus persica HOM05D005843 ORTHO05D007781 3.6e-206 721.8 522 69.7
FAN05G5617 Fragaria x ananassa HOM05D005843 ORTHO05D007781 6.4e-203 711.1 522 69.0
FAN14G2296 Fragaria x ananassa HOM05D005843 ORTHO05D007781 8.4e-203 710.7 522 68.8
MD12G1140900 Malus domestica HOM05D005843 ORTHO05D007781 3.5e-201 705.3 522 68.4
Haze_20785 Corylus avellana HOM05D005843 ORTHO05D007781 6.6e-200 701.0 536 68.5
MD04G1127500 Malus domestica HOM05D005843 ORTHO05D007781 1.5e-199 699.9 522 69.5
CiPaw.09G192200 Carya illinoinensis HOM05D005843 ORTHO05D007781 7.3e-199 697.6 522 66.5
Atru.chr8.1969 Acer truncatum HOM05D005843 ORTHO05D007781 2.4e-197 692.6 522 67.2
QL06p005681 Quercus lobata HOM05D005843 ORTHO05D007781 6.9e-197 691.0 521 66.6
GSVIVG01034179001 Vitis vinifera HOM05D005843 ORTHO05D007781 1.5e-196 689.9 522 67.2
TAR633G1568 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.9e-194 682.9 523 67.7
FAN02G2362 Fragaria x ananassa HOM05D005843 ORTHO05D007781 7.9e-193 677.6 542 65.7
QL11p021821 Quercus lobata HOM05D005843 ORTHO05D007781 3.9e-192 675.2 563 61.8
Manes.17G047400 Manihot esculenta HOM05D005843 ORTHO05D007781 4.0e-189 665.2 522 64.6
Duzib128G1977 Durio zibethinus HOM05D005843 ORTHO05D007781 1.2e-188 663.7 542 64.8
Cpa.g.sc332.7 Carica papaya HOM05D005843 ORTHO05D007781 6.4e-187 657.9 522 64.2
Eucgr.K03141 Eucalyptus grandis HOM05D005843 ORTHO05D007781 3.2e-186 655.6 522 62.8
FAN09G3893 Fragaria x ananassa HOM05D005843 ORTHO05D007781 3.5e-185 652.1 532 64.3
Gohir.A09G156300 Gossypium hirsutum HOM05D005843 ORTHO05D007781 4.6e-185 651.7 523 65.4
Hma1.2p1_1513F.1_g288040 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 6.0e-185 651.4 522 64.4
Nn8g39667 Nelumbo nucifera HOM05D005843 ORTHO05D007781 7.9e-185 651.0 522 62.3
Thecc.05G040300 Theobroma cacao HOM05D005843 ORTHO05D007781 1.1e-183 647.1 525 65.9
Gorai.006G173000 Gossypium raimondii HOM05D005843 ORTHO05D007781 7.4e-183 644.4 522 64.4
Gohir.D09G151700 Gossypium hirsutum HOM05D005843 ORTHO05D007781 2.1e-182 642.9 522 64.2
MELO3C003129.2 Cucumis melo HOM05D005843 ORTHO05D007781 5.3e-181 638.3 523 62.1
Lj3C968G10 Lonicera japonica HOM05D005843 ORTHO05D007781 1.5e-180 636.7 560 60.0
Medtr7g060680 Medicago truncatula HOM05D005843 ORTHO05D007781 2.0e-180 636.3 522 63.4
TPR.G23290 Trifolium pratense HOM05D005843 ORTHO05D007781 4.5e-180 635.2 522 62.8
CsaV3_4G024980 Cucumis sativus L. HOM05D005843 ORTHO05D007781 7.6e-180 634.4 522 61.9
TWI38G1602 Tripterygium wilfordii HOM05D005843 ORTHO05D007781 1.0e-179 634.0 522 62.5
Ca_26026_v3 Cicer arietinum L. HOM05D005843 ORTHO05D007781 1.1e-178 630.6 522 62.3
Glyma.07G131100 Glycine max HOM05D005843 ORTHO05D007781 1.1e-178 630.6 522 61.9
Lalb_Chr19g0125371 Lupinus albus HOM05D005843 ORTHO05D007781 4.2e-178 628.6 522 62.6
PSO151G0180 Papaver somniferum HOM05D005843 ORTHO05D007781 9.3e-178 627.5 523 61.4
Cc06_g02690 Coffea canephora HOM05D005843 ORTHO05D007781 2.1e-177 626.3 522 62.1
PSO339G2649 Papaver somniferum HOM05D005843 ORTHO05D007781 2.1e-177 626.3 525 61.1
DCAR_014847 Daucus carota HOM05D005843 ORTHO05D007781 2.7e-177 625.9 524 62.0
ClCG04G008190 Citrullus lanatus HOM05D005843 ORTHO05D007781 8.7e-176 620.9 522 61.9
Oeu024347.1 Olea europaea HOM05D005843 ORTHO05D007781 1.1e-175 620.5 522 60.7
Psat5g101400 Pisum sativum HOM05D005843 ORTHO05D007781 4.8e-174 615.1 522 60.7
Phvul.008G100900 Phaseolus vulgaris HOM05D005843 ORTHO05D007781 8.2e-174 614.4 522 60.5
Rhsim05G0192300 Rhododendron simsii HOM05D005843 ORTHO05D007781 8.2e-174 614.4 522 62.5
PGR004G0455 Punica granatum HOM05D005843 ORTHO05D007781 5.3e-173 611.7 522 60.3
arahy.Tifrunner.gnm1.ann1.JAB43P Arachis hypogaea HOM05D005843 ORTHO05D007781 2.6e-172 609.4 523 60.6
Aqoxy6G01388 Aquilegia oxysepala HOM05D005843 ORTHO05D007781 1.0e-171 607.4 523 60.6
Sed0019468 Sechium edule HOM05D005843 ORTHO05D007781 1.3e-171 607.1 494 63.0
VMungo1383G2898 Vigna mungo HOM05D005843 ORTHO05D007781 3.8e-171 605.5 522 60.2
Sc20g0004950 Simmondsia chinensis HOM05D005843 ORTHO05D007781 4.2e-170 602.1 522 59.0
Hund24578 Selenicereus undatus HOM05D005843 ORTHO05D007781 1.2e-169 600.5 522 59.4
Migut.J00332 Erythranthe guttata HOM05D005843 ORTHO05D007781 3.0e-168 595.9 522 60.2
ECA238G1173 Erigeron canadensis HOM05D005843 ORTHO05D007781 6.7e-168 594.7 524 59.4
A10p33250 Brassica napus HOM05D005843 ORTHO05D007781 3.7e-166 589.0 527 59.4
Nitab4.5_0001190g0070 Nicotiana tabacum HOM05D005843 ORTHO05D007781 2.4e-165 586.3 523 58.9
PGSC0003DMG400008911 Solanum tuberosum HOM05D005843 ORTHO05D007781 6.9e-165 584.7 523 58.5
CAN.G326.14 Capsicum annuum HOM05D005843 ORTHO05D007781 2.0e-164 583.2 523 58.3
EL10Ac3g07255 Beta vulgaris HOM05D005843 ORTHO05D007781 2.6e-164 582.8 522 58.0
BolC9t60149H Brassica oleracea HOM05D005843 ORTHO05D007781 2.6e-164 582.8 525 58.9
Sopen09g005490 Solanum pennellii HOM05D005843 ORTHO05D007781 7.7e-164 581.3 523 57.7
Thhalv10013300m.g Eutrema salsugineum HOM05D005843 ORTHO05D007781 1.0e-163 580.9 525 57.7
BcaNung02129 Brassica carinata HOM05D005843 ORTHO05D007781 5.0e-163 578.6 523 58.7
Carub.0006s0120 Capsella rubella HOM05D005843 ORTHO05D007781 8.5e-163 577.8 527 58.3
CARHR211000 Cardamine hirsuta HOM05D005843 ORTHO05D007781 1.1e-162 577.4 525 59.0
AT5G02410 Arabidopsis thaliana HOM05D005843 ORTHO05D007781 2.5e-162 576.2 525 57.9
THA.LOC104809903 Tarenaya hassleriana HOM05D005843 ORTHO05D007781 2.5e-162 576.2 523 58.5
Sp6g40070 Schrenkiella parvula HOM05D005843 ORTHO05D007781 3.2e-162 575.9 525 58.9
BcaNung05922 Brassica carinata HOM05D005843 ORTHO05D007781 4.2e-162 575.5 532 58.1
SalBow3G1829 Salvia bowleyana HOM05D005843 ORTHO05D007781 4.2e-162 575.5 520 57.5
SGA_v2.0_scaffold75G24948 Striga asiatica HOM05D005843 ORTHO05D007781 5.5e-162 575.1 522 57.9
Glyma.18G179500 Glycine max HOM05D005843 ORTHO05D007781 7.2e-162 574.7 522 58.2
Lsat_1_v5_gn_2_17401 Lactuca sativa HOM05D005843 ORTHO05D007781 2.1e-161 573.2 517 56.9
Solyc09g010770.3 Solanum lycopersicum HOM05D005843 ORTHO05D007781 6.1e-161 571.6 523 57.9
AL6G11640 Arabidopsis lyrata HOM05D005843 ORTHO05D007781 5.1e-160 568.5 510 58.0
BcaC06g31988 Brassica carinata HOM05D005843 ORTHO05D007781 5.1e-160 568.5 527 57.7
A03p00670 Brassica napus HOM05D005843 ORTHO05D007781 5.1e-160 568.5 525 58.3
C03p00940 Brassica napus HOM05D005843 ORTHO05D007781 5.7e-159 565.1 522 58.0
BolC3t12656H Brassica oleracea HOM05D005843 ORTHO05D007781 5.7e-159 565.1 522 58.0
BraA03t09456Z Brassica rapa HOM05D005843 ORTHO05D007781 2.2e-158 563.1 532 57.3
Hma1.2p1_1513F.1_g288030 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 2.2e-158 563.1 470 62.8
HanXRQChr16g0515781 Helianthus annuus HOM05D005843 ORTHO05D007781 3.7e-158 562.4 506 58.1
BcaB01g06160 Brassica carinata HOM05D005843 ORTHO05D007781 4.8e-158 562.0 522 57.7
Sabra06G0064400 Salix brachista HOM05D005843 ORTHO05D007781 1.4e-157 560.5 544 56.2
Dinv35609 Davidia involucrata HOM05D005843 ORTHO05D007781 2.6e-156 556.2 437 66.1
Peaxi162Scf00165g01322 Petunia axillaris HOM05D005843 ORTHO05D007781 2.6e-156 556.2 565 54.7
CSS0035027 Camellia sinensis var. sinensis HOM05D005843 ORTHO05D007781 1.4e-154 550.4 473 63.0
Actinidia26464 Actinidia chinensis HOM05D005843 ORTHO05D000250 3.6e-153 545.8 448 64.3
AUR62030297 Chenopodium quinoa HOM05D005843 ORTHO05D007781 1.7e-150 537.0 591 52.3
C09p74160 Brassica napus HOM05D005843 ORTHO05D007781 3.7e-150 535.8 524 56.3
Lj3g0024665 Lotus japonicus HOM05D005843 ORTHO05D007781 8.2e-150 534.6 463 60.5
Aa31LG1G22390 Aethionema arabicum HOM05D005843 ORTHO05D007781 5.3e-149 531.9 595 50.4
HPP92_000805 Vanilla planifolia HOM05D005843 ORTHO05D007781 8.0e-145 518.1 523 51.6
SHI00339 Sapria himalayana HOM05D005843 ORTHO05D007781 7.7e-140 501.5 543 49.9
FvH4_6g13910 Fragaria vesca HOM05D005843 ORTHO05D007781 2.6e-135 486.5 387 65.1
AUR62015928 Chenopodium quinoa HOM05D005843 ORTHO05D007781 3.8e-131 472.6 523 50.5
unitig_26.g9195 Utricularia gibba HOM05D005843 ORTHO05D007781 3.4e-127 459.5 473 54.8
arahy.Tifrunner.gnm1.ann1.HAEF8J Arachis hypogaea HOM05D005843 ORTHO05D007781 8.0e-121 438.3 396 58.1
Pp3c4_12410 Physcomitrium patens HOM05D005843 ORTHO05D007781 9.8e-119 431.4 533 45.4
Os04g0503700 Oryza sativa ssp. japonica HOM05D005843 ORTHO05D007781 7.8e-116 421.8 480 45.4
Dinv37176 Davidia involucrata HOM05D005843 ORTHO05D007781 8.0e-113 411.8 351 62.4
SMO137G0039 Selaginella moellendorffii HOM05D005843 ORTHO05D007781 4.0e-104 382.9 543 41.4
Potri.006G084800 Populus trichocarpa HOM05D005843 ORTHO05D007781 9.9e-103 378.3 336 59.8
AUR62018365 Chenopodium quinoa HOM05D005843 ORTHO05D007781 1.6e-97 360.9 366 56.8
Mapoly0047s0019 Marchantia polymorpha HOM05D005843 ORTHO05D007781 2.4e-96 357.1 536 39.9
ATR0585G056 Amborella trichopoda HOM05D005843 ORTHO05D007781 3.9e-91 339.7 398 47.0
vmacro20152 Vaccinium macrocarpon HOM05D005843 ORTHO05D007781 9.3e-85 318.5 525 41.9
CDE09G0345 Ceratophyllum demersum HOM05D005843 ORTHO05D007781 4.8e-81 306.2 468 41.2
Zm00001eb078080 Zea mays HOM05D005843 ORTHO05D007781 4.6e-76 289.7 352 44.9
Nitab4.5_0002018g0090 Nicotiana tabacum HOM05D005843 ORTHO05D007781 6.7e-75 285.8 261 57.5
BcaC06g31987 Brassica carinata HOM05D005843 ORTHO05D007781 2.5e-74 283.9 334 50.3
A03p00710 Brassica napus HOM05D005843 ORTHO05D007781 2.4e-72 277.3 196 68.9
SGA_v2.0_scaffold75G24944 Striga asiatica HOM05D005843 ORTHO05D007781 3.2e-69 266.9 444 40.3
AagrBONN_evm.TU.Sc2ySwM_117.1914 Anthoceros agrestis HOM05D005843 ORTHO05D007781 1.2e-68 265.0 474 36.1
BcaNung05921 Brassica carinata HOM05D002515 ORTHO05D002722 2.9e-62 243.8 405 41.5
TAR636G2087 Trochodendron aralioides HOM05D005843 ORTHO05D007781 2.2e-54 217.6 166 66.3
CBR_g29861 Chara braunii HOM05D005843 ORTHO05D000002 4.3e-50 203.4 366 37.2
Cre01.g041300 Chlamydomonas reinhardtii HOM05D005843 ORTHO05D007781 6.3e-49 199.5 547 30.7
VMungo1309G2290 Vigna mungo HOM05D005843 ORTHO05D007781 2.0e-47 194.5 135 69.6
TAR636G1000 Trochodendron aralioides HOM05D005843 ORTHO05D007781 6.3e-41 172.9 129 66.7
TAR636G1324 Trochodendron aralioides HOM05D005843 ORTHO05D007781 6.3e-41 172.9 129 66.7
DCAR_015734 Daucus carota HOM05D005843 ORTHO05D007781 5.9e-39 166.4 136 60.3
Haze_26583 Corylus avellana HOM05D005843 ORTHO05D007781 6.5e-30 136.3 514 28.0
AUR62040681 Chenopodium quinoa HOM05D005843 ORTHO05D007781 2.8e-25 120.9 191 41.4
DCAR_015735 Daucus carota HOM05D005843 ORTHO05D007781 4.1e-24 117.1 60 90.0
TAR636G3605 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.2e-20 105.5 57 82.5
SEGI_06123 Sequoiadendron giganteum HOM05D005843 ORTHO05D007781 1.0e-19 102.4 125 44.8
SEGI_08652 Sequoiadendron giganteum HOM05D005843 ORTHO05D000001 1.5e-18 98.6 59 69.5
VMungo1309G1664 Vigna mungo HOM05D005843 ORTHO05D007781 1.5e-18 98.6 233 33.5
Hma1.2p1_1611F.1_g293520 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 4.4e-18 97.1 53 81.1
C03p92170 Brassica napus HOM05D005843 ORTHO05D040940 1.7e-17 95.1 62 72.6
BolC3t21533H Brassica oleracea HOM05D005843 ORTHO05D040940 1.7e-17 95.1 62 72.6
TAR636G0893 Trochodendron aralioides HOM05D005843 ORTHO05D007781 7.0e-16 89.7 65 63.1
BraA10t45356Z Brassica rapa HOM05D005843 ORTHO05D007781 9.5e-13 79.3 65 56.9
SEGI_16582 Sequoiadendron giganteum HOM05D005843 ORTHO05D014789 5.2e-11 73.6 138 35.5


User provided reference genes

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