Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G1729 Cannabis sativa HOM05D003201 ORTHO05D008805 1.7e-134 482.6 245 100.0
Cfa002302 Carpinus fangiana HOM05D003201 ORTHO05D008805 4.3e-93 345.1 254 68.9
TPR.G5800 Trifolium pratense HOM05D003201 ORTHO05D008805 4.8e-92 341.7 254 68.5
Medtr6g059320 Medicago truncatula HOM05D003201 ORTHO05D008805 3.1e-91 339.0 254 67.7
QL04p043008 Quercus lobata HOM05D003201 ORTHO05D008805 7.7e-90 334.3 259 65.3
Lj2g0011105 Lotus japonicus HOM05D003201 ORTHO05D008805 1.0e-89 334.0 260 63.8
Lalb_Chr01g0008671 Lupinus albus HOM05D003201 ORTHO05D008805 1.3e-89 333.6 259 65.6
Psat1g112800 Pisum sativum HOM05D003201 ORTHO05D008805 1.3e-89 333.6 259 64.9
VMungo0464G1483 Vigna mungo HOM05D003201 ORTHO05D008805 2.9e-89 332.4 257 65.4
Glyma.16G207100 Glycine max HOM05D003201 ORTHO05D008805 5.0e-89 331.6 261 64.4
Phvul.004G131600 Phaseolus vulgaris HOM05D003201 ORTHO05D008805 1.4e-88 330.1 257 63.8
Thecc.05G124600 Theobroma cacao HOM05D003201 ORTHO05D008805 2.5e-88 329.3 256 66.4
Dinv15525 Davidia involucrata HOM05D003201 ORTHO05D008805 3.2e-88 328.9 261 64.4
GSVIVG01034815001 Vitis vinifera HOM05D003201 ORTHO05D008805 1.6e-87 326.6 260 64.2
Prupe.6G000300 Prunus persica HOM05D003201 ORTHO05D008805 2.1e-87 326.2 261 63.6
RcHm_v2.0_Chr5g0084171 Rosa chinensis HOM05D003201 ORTHO05D008805 3.6e-87 325.5 261 63.2
Glyma.09G156400 Glycine max HOM05D003201 ORTHO05D008805 2.3e-86 322.8 261 63.2
Actinidia16221 Actinidia chinensis HOM05D003201 ORTHO05D008805 3.0e-86 322.4 259 62.2
Aqoxy5G03624 Aquilegia oxysepala HOM05D003201 ORTHO05D008805 3.9e-86 322.0 263 62.7
Gohir.D09G114700 Gossypium hirsutum HOM05D003201 ORTHO05D008805 3.9e-86 322.0 259 64.5
FvH4_3g46100 Fragaria vesca HOM05D003201 ORTHO05D008805 5.1e-86 321.6 261 62.5
Gohir.A09G117900 Gossypium hirsutum HOM05D003201 ORTHO05D008805 1.5e-85 320.1 256 64.8
PSO339G6265 Papaver somniferum HOM05D003201 ORTHO05D008805 2.0e-85 319.7 262 62.6
TWI34G1882 Tripterygium wilfordii HOM05D003201 ORTHO05D008805 5.7e-85 318.2 258 63.6
PSO384G0221 Papaver somniferum HOM05D003201 ORTHO05D008805 2.8e-84 315.8 262 61.8
TAR623G0449 Trochodendron aralioides HOM05D003201 ORTHO05D008805 3.7e-84 315.5 263 61.2
MD11G1000200 Malus domestica HOM05D003201 ORTHO05D008805 4.8e-84 315.1 265 61.5
Sabra13G0129200 Salix brachista HOM05D003201 ORTHO05D008805 1.4e-80 303.5 265 59.6
ATR0068G091 Amborella trichopoda HOM05D003201 ORTHO05D008805 1.9e-80 303.1 240 63.3
MELO3C024592.2 Cucumis melo HOM05D003201 ORTHO05D008805 1.9e-80 303.1 243 64.2
MBI13_g39202_MAGBIO Magnolia biondii HOM05D003201 ORTHO05D008805 1.9e-80 303.1 263 60.8
Potri.013G161600 Populus trichocarpa HOM05D003201 ORTHO05D008805 1.9e-80 303.1 264 59.8
CSS0031904 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008805 5.5e-80 301.6 260 61.9
arahy.Tifrunner.gnm1.ann1.75P5EB Arachis hypogaea HOM05D003201 ORTHO05D008805 7.2e-80 301.2 209 70.3
ECA248G3933 Erigeron canadensis HOM05D003201 ORTHO05D008805 9.4e-80 300.8 241 63.1
AL7G33540 Arabidopsis lyrata HOM05D003201 ORTHO05D008805 1.2e-79 300.4 241 64.7
BraA01t01146Z Brassica rapa HOM05D003201 ORTHO05D008914 1.6e-79 300.1 239 63.2
A01p12040 Brassica napus HOM05D003201 ORTHO05D008914 6.1e-79 298.1 239 62.3
HanXRQChr17g0555621 Helianthus annuus HOM05D003201 ORTHO05D008805 7.9e-79 297.7 242 62.0
ClCG01G015060 Citrullus lanatus HOM05D003201 ORTHO05D008805 1.0e-78 297.4 242 63.6
THA.LOC104806236 Tarenaya hassleriana HOM05D003201 ORTHO05D008805 1.0e-78 297.4 253 60.1
C01p14340 Brassica napus HOM05D003201 ORTHO05D008914 2.3e-78 296.2 243 61.7
Thhalv10026088m.g Eutrema salsugineum HOM05D003201 ORTHO05D008805 2.3e-78 296.2 248 61.7
Sp7g18690 Schrenkiella parvula HOM05D003201 ORTHO05D008805 2.3e-78 296.2 246 61.0
CAN.G431.2 Capsicum annuum HOM05D003201 ORTHO05D008805 3.0e-78 295.8 256 60.2
Hma1.2p1_1133F.1_g260360 Hydrangea macrophylla HOM05D003201 ORTHO05D008805 3.0e-78 295.8 265 59.6
Hma1.2p1_1133F.1_g260370 Hydrangea macrophylla HOM05D003201 ORTHO05D008805 3.0e-78 295.8 265 59.6
CARHR227170 Cardamine hirsuta HOM05D003201 ORTHO05D008805 5.2e-78 295.0 247 60.3
vmacro04280 Vaccinium macrocarpon HOM05D003201 ORTHO05D008805 1.1e-77 293.9 272 58.5
Aa31LG6G2740 Aethionema arabicum HOM05D003201 ORTHO05D008914 2.6e-77 292.7 252 59.5
CsaV3_6G041170 Cucumis sativus L. HOM05D003201 ORTHO05D008805 3.3e-77 292.4 243 62.6
CiPaw.03G255400 Carya illinoinensis HOM05D003201 ORTHO05D008805 4.4e-77 292.0 221 68.3
Carub.0007s2082 Capsella rubella HOM05D003201 ORTHO05D008805 5.7e-77 291.6 240 62.9
Cc01_g05060 Coffea canephora HOM05D003201 ORTHO05D008805 1.3e-76 290.4 265 58.9
Solyc01g057570.3 Solanum lycopersicum HOM05D003201 ORTHO05D008805 4.8e-76 288.5 256 57.4
MSTRG.12815 Avicennia marina HOM05D003201 ORTHO05D008805 6.3e-76 288.1 249 61.4
arahy.Tifrunner.gnm1.ann1.F1EX5J Arachis hypogaea HOM05D003201 ORTHO05D008805 1.1e-75 287.3 229 64.6
Sopen01g022430 Solanum pennellii HOM05D003201 ORTHO05D008805 1.4e-75 287.0 256 57.4
DCAR_028397 Daucus carota HOM05D003201 ORTHO05D008805 4.5e-74 282.0 259 56.8
AUR62000916 Chenopodium quinoa HOM05D003201 ORTHO05D008805 1.3e-73 280.4 255 56.1
Peaxi162Scf01181g00210 Petunia axillaris HOM05D003201 ORTHO05D008805 2.2e-73 279.6 268 56.0
Migut.N00525 Erythranthe guttata HOM05D003201 ORTHO05D008805 5.0e-73 278.5 245 58.8
Sc18g0002730 Simmondsia chinensis HOM05D003201 ORTHO05D008805 5.5e-72 275.0 198 67.2
Zm00001eb047810 Zea mays HOM05D003201 ORTHO05D008805 1.2e-71 273.9 266 52.6
BolC1t01393H Brassica oleracea HOM05D000280 ORTHO05D004510 2.7e-71 272.7 247 57.5
Eucgr.J01718 Eucalyptus grandis HOM05D003201 ORTHO05D008805 4.7e-71 271.9 222 65.8
EL10Ac4g09260 Beta vulgaris HOM05D003201 ORTHO05D008805 1.0e-70 270.8 292 50.7
PGR119G1272 Punica granatum HOM05D003201 ORTHO05D008805 1.8e-70 270.0 257 58.0
Lsat_1_v5_gn_1_71340 Lactuca sativa HOM05D003201 ORTHO05D008805 4.0e-70 268.9 206 66.0
BcaC09g51346 Brassica carinata HOM05D003201 ORTHO05D008805 6.7e-70 268.1 211 63.0
CDE02G2127 Ceratophyllum demersum HOM05D003201 ORTHO05D008805 1.5e-69 266.9 260 55.8
Sed0008662 Sechium edule HOM05D003201 ORTHO05D008805 5.7e-69 265.0 245 57.6
HPP92_021155 Vanilla planifolia HOM05D003201 ORTHO05D008805 2.8e-68 262.7 253 56.1
Sopen01g019970 Solanum pennellii HOM05D003201 ORTHO05D008805 1.1e-67 260.8 256 54.7
Gorai.006G132500 Gossypium raimondii HOM05D003201 ORTHO05D008805 5.3e-67 258.5 191 68.1
Atru.chr2.209 Acer truncatum HOM05D003201 ORTHO05D008805 1.6e-66 256.9 184 68.5
unitig_0.g1143 Utricularia gibba HOM05D003201 ORTHO05D008805 3.5e-66 255.8 229 57.6
SEGI_31075 Sequoiadendron giganteum HOM05D003201 ORTHO05D008805 3.8e-65 252.3 274 50.7
Ciclev10029320m.g Citrus clementina HOM05D003201 ORTHO05D008805 1.9e-64 250.0 177 67.8
SGA_v2.0_scaffold6G03334 Striga asiatica HOM05D003201 ORTHO05D008805 5.5e-64 248.4 279 50.9
Pp3c2_18510 Physcomitrium patens HOM05D003201 ORTHO05D008805 1.6e-63 246.9 256 50.0
Os10g0420000 Oryza sativa ssp. japonica HOM05D003201 ORTHO05D008805 2.1e-63 246.5 249 51.8
Haze_24508 Corylus avellana HOM05D003201 ORTHO05D008805 1.2e-61 240.7 194 66.0
SMO147G0005 Selaginella moellendorffii HOM05D003201 ORTHO05D008805 5.7e-61 238.4 235 54.0
Mapoly0007s0017 Marchantia polymorpha HOM05D003201 ORTHO05D008805 7.5e-61 238.0 255 49.0
SMO132G0004 Selaginella moellendorffii HOM05D003201 ORTHO05D008805 2.4e-59 233.0 247 49.4
AT4G20350 Arabidopsis thaliana HOM05D003201 ORTHO05D008805 2.5e-56 223.0 188 63.3
FAN11G2508 Fragaria x ananassa HOM05D003201 ORTHO05D008805 3.6e-55 219.2 198 59.6
FAN16G0934 Fragaria x ananassa HOM05D000104 ORTHO05D004363 2.8e-52 209.5 236 49.6
FAN25G0659 Fragaria x ananassa HOM05D003201 ORTHO05D008805 4.9e-52 208.8 190 58.4
Duzib093G2193 Durio zibethinus HOM05D003201 ORTHO05D008805 1.2e-50 204.1 256 48.0
AUR62005054 Chenopodium quinoa HOM05D003201 ORTHO05D008805 1.0e-49 201.1 197 53.3
Nitab4.5_0000075g0050 Nicotiana tabacum HOM05D003201 ORTHO05D008805 1.7e-49 200.3 276 44.9
Manes.18G121700 Manihot esculenta HOM05D003201 ORTHO05D008805 5.0e-49 198.7 192 57.3
AUR62004843 Chenopodium quinoa HOM05D003201 ORTHO05D008805 3.3e-48 196.1 130 67.7
Cpa.g.sc30.50 Carica papaya HOM05D003201 ORTHO05D008805 1.3e-44 184.1 180 56.7
Rhsim13G0235500 Rhododendron simsii HOM05D003201 ORTHO05D008805 9.2e-43 177.9 316 39.2
MBI13_g36948_MAGBIO Magnolia biondii HOM05D003201 ORTHO05D008805 2.0e-42 176.8 176 54.5
Ca_25246_v3 Cicer arietinum L. HOM05D003201 ORTHO05D008805 3.9e-41 172.6 151 60.9
SalBow3G4219 Salvia bowleyana HOM05D003201 ORTHO05D008805 2.0e-37 160.2 129 63.6
FAN21G2623 Fragaria x ananassa HOM05D003201 ORTHO05D008805 1.7e-36 157.1 161 55.3
Lj1A555G38 Lonicera japonica HOM05D003201 ORTHO05D008805 7.8e-34 148.3 155 54.8
COL.COLO4_24749 Corchorus olitorius HOM05D003201 ORTHO05D008805 2.5e-32 143.3 256 38.3
Hund07019 Selenicereus undatus HOM05D003201 ORTHO05D008805 4.3e-32 142.5 154 54.5
Nitab4.5_0005125g0010 Nicotiana tabacum HOM05D003201 ORTHO05D008805 7.3e-32 141.7 134 56.7
PGSC0003DMG400026601 Solanum tuberosum HOM05D003201 ORTHO05D008805 7.3e-32 141.7 156 52.6
MCO03G055 Micromonas commoda HOM05D003201 ORTHO05D008805 1.4e-30 137.5 222 38.7
CBR_g45550 Chara braunii HOM05D000019 ORTHO05D000353 2.1e-26 123.6 105 51.4
Cre14.g632791 Chlamydomonas reinhardtii HOM05D003201 ORTHO05D008805 6.8e-22 108.6 173 35.3
FAN11G4037 Fragaria x ananassa HOM05D003201 ORTHO05D008805 9.9e-21 104.8 64 71.9
Cfa026017 Carpinus fangiana HOM05D003201 ORTHO05D124792 8.4e-20 101.7 187 35.8
FAN25G1903 Fragaria x ananassa HOM05D003201 ORTHO05D008805 7.1e-19 98.6 64 70.3
MCO08G131 Micromonas commoda HOM05D003201 ORTHO05D008805 9.2e-19 98.2 173 37.6
PRCOL_00004726 Prasinoderma coloniale HOM05D003201 ORTHO05D008805 1.5e-13 80.9 175 32.0
arahy.Tifrunner.gnm1.ann1.IELT58 Arachis hypogaea HOM05D006806 ORTHO05D008448 5.6e-08 62.4 199 30.2
arahy.Tifrunner.gnm1.ann1.68R93N Arachis hypogaea HOM05D006806 ORTHO05D008448 1.3e-07 61.2 182 31.3


User provided reference genes

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