Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G1615 Cannabis sativa HOM05D000003 ORTHO05D000283 4.7e-79 297.7 144 100.0
CANSAT35G1509 Cannabis sativa HOM05D000003 ORTHO05D000283 4.0e-62 241.5 144 79.2
CANSAT11G1452 Cannabis sativa HOM05D000003 ORTHO05D000283 1.3e-60 236.5 144 76.4
CANSAT21G0904 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-43 179.5 104 82.7
CANSAT11G0832 Cannabis sativa HOM05D000003 ORTHO05D000004 3.2e-43 178.7 101 84.2
CANSAT80G0884 Cannabis sativa HOM05D000003 ORTHO05D000004 1.0e-41 173.7 141 55.3
CANSAT64G1318 Cannabis sativa HOM05D000003 ORTHO05D000283 1.3e-41 173.3 144 55.6
CANSAT25G0437 Cannabis sativa HOM05D000003 ORTHO05D000283 2.8e-39 165.6 144 51.4
CANSAT01G0114 Cannabis sativa HOM05D000003 ORTHO05D000283 3.6e-39 165.2 144 51.4
CANSAT56G2948 Cannabis sativa HOM05D000003 ORTHO05D000283 6.2e-39 164.5 144 51.4
CANSAT64G0488 Cannabis sativa HOM05D000003 ORTHO05D000283 1.1e-38 163.7 134 56.7
CANSAT64G0644 Cannabis sativa HOM05D000003 ORTHO05D000004 2.3e-38 162.5 144 52.1
CANSAT54G2858 Cannabis sativa HOM05D000003 ORTHO05D000283 4.4e-37 158.3 144 49.3
CANSAT80G1810 Cannabis sativa HOM05D000003 ORTHO05D000004 6.0e-34 147.9 127 50.4
CANSAT54G2486 Cannabis sativa HOM05D000003 ORTHO05D000283 1.0e-33 147.1 139 46.0
CANSAT11G1606 Cannabis sativa HOM05D000003 ORTHO05D000283 2.8e-31 139.0 141 47.5
CANSAT21G1632 Cannabis sativa HOM05D000003 ORTHO05D000283 8.1e-31 137.5 122 51.6
CANSAT80G2053 Cannabis sativa HOM05D000003 ORTHO05D000283 1.4e-30 136.7 144 45.1
CANSAT01G0556 Cannabis sativa HOM05D000003 ORTHO05D000283 2.9e-28 129.0 141 44.0
CANSAT56G1830 Cannabis sativa HOM05D000003 ORTHO05D000283 2.4e-27 125.9 144 42.4
CANSAT35G2061 Cannabis sativa HOM05D000003 ORTHO05D000004 4.1e-27 125.2 141 41.1
CANSAT01G0969 Cannabis sativa HOM05D000003 ORTHO05D000004 5.4e-27 124.8 142 42.3
CANSAT64G0333 Cannabis sativa HOM05D000003 ORTHO05D000283 7.1e-27 124.4 144 41.0
CANSAT64G1732 Cannabis sativa HOM05D000003 ORTHO05D000283 1.6e-26 123.2 138 42.8
CANSAT80G0724 Cannabis sativa HOM05D000003 ORTHO05D000283 2.1e-26 122.9 142 40.8
CANSAT80G1505 Cannabis sativa HOM05D000003 ORTHO05D000283 4.6e-26 121.7 142 40.1
CANSAT54G2598 Cannabis sativa HOM05D000003 ORTHO05D000283 6.0e-26 121.3 143 42.7
CANSAT80G0431 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-25 120.2 144 43.1
CANSAT64G0889 Cannabis sativa HOM05D000003 ORTHO05D000283 1.7e-25 119.8 144 43.1
CANSAT56G3640 Cannabis sativa HOM05D000003 ORTHO05D000283 3.0e-25 119.0 141 41.8
CANSAT54G2737 Cannabis sativa HOM05D000003 ORTHO05D000283 5.1e-25 118.2 143 41.3
CANSAT80G1175 Cannabis sativa HOM05D000003 ORTHO05D000004 1.5e-24 116.7 97 53.6
CANSAT80G2922 Cannabis sativa HOM05D000003 ORTHO05D000004 9.6e-24 114.0 140 42.1
CANSAT11G0144 Cannabis sativa HOM05D000003 ORTHO05D000283 2.1e-23 112.8 142 40.1
CANSAT21G1808 Cannabis sativa HOM05D000003 ORTHO05D000004 3.6e-23 112.1 144 38.9
CANSAT35G1278 Cannabis sativa HOM05D000003 ORTHO05D000283 8.1e-23 110.9 144 38.9
CANSAT64G0747 Cannabis sativa HOM05D000003 ORTHO05D000283 6.9e-22 107.8 144 36.8
CANSAT54G0583 Cannabis sativa HOM05D000003 ORTHO05D000283 1.2e-21 107.1 114 42.1
CANSAT35G0149 Cannabis sativa HOM05D000003 ORTHO05D000283 3.4e-21 105.5 142 37.3
CANSAT35G0552 Cannabis sativa HOM05D000003 ORTHO05D000004 9.9e-21 104.0 96 54.2
CANSAT11G2646 Cannabis sativa HOM05D000003 ORTHO05D000283 1.7e-20 103.2 130 37.7
CANSAT25G1242 Cannabis sativa HOM05D000003 ORTHO05D000283 1.7e-20 103.2 140 35.7
CANSAT80G0153 Cannabis sativa HOM05D000003 ORTHO05D000004 4.9e-20 101.7 140 35.0
CANSAT80G2572 Cannabis sativa HOM05D000003 ORTHO05D000283 8.4e-20 100.9 100 45.0
CANSAT56G2913 Cannabis sativa HOM05D000003 ORTHO05D000283 1.1e-19 100.5 149 40.9
CANSAT11G1846 Cannabis sativa HOM05D000003 ORTHO05D000283 2.4e-19 99.4 131 37.4
CANSAT01G0401 Cannabis sativa HOM05D000003 ORTHO05D000283 3.2e-19 99.0 125 42.4
CANSAT21G1371 Cannabis sativa HOM05D000003 ORTHO05D000283 1.2e-18 97.1 115 41.7
CANSAT54G1632 Cannabis sativa HOM05D000003 ORTHO05D000283 2.1e-18 96.3 102 43.1
CANSAT01G1188 Cannabis sativa HOM05D000003 ORTHO05D000004 6.0e-18 94.7 115 41.7
CANSAT35G0062 Cannabis sativa HOM05D000003 ORTHO05D000283 1.0e-17 94.0 147 37.4
CANSAT54G1864 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-17 93.6 141 36.9
CANSAT64G2638 Cannabis sativa HOM05D000003 ORTHO05D000283 8.7e-17 90.9 101 42.6
CANSAT21G0124 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-16 89.7 111 38.7
CANSAT21G2619 Cannabis sativa HOM05D000003 ORTHO05D000004 2.5e-16 89.4 137 36.5
CANSAT21G1308 Cannabis sativa HOM05D000003 ORTHO05D000283 4.3e-16 88.6 137 35.0
CANSAT80G0397 Cannabis sativa HOM05D000003 ORTHO05D000004 7.3e-16 87.8 145 31.7
CANSAT11G0770 Cannabis sativa HOM05D000003 ORTHO05D000004 9.6e-16 87.4 91 42.9
CANSAT56G0847 Cannabis sativa HOM05D000003 ORTHO05D000283 2.8e-15 85.9 103 37.9
CANSAT35G0602 Cannabis sativa HOM05D000003 ORTHO05D000004 8.1e-15 84.3 93 38.7
CANSAT11G1305 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-14 83.6 99 41.4
CANSAT21G0242 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-14 83.6 137 32.8
CANSAT21G2448 Cannabis sativa HOM05D000003 ORTHO05D000004 1.8e-14 83.2 72 48.6
CANSAT21G2227 Cannabis sativa HOM05D000003 ORTHO05D000004 2.6e-13 79.3 97 41.2
CANSAT54G0647 Cannabis sativa HOM05D000003 ORTHO05D000004 3.4e-13 79.0 77 45.5
Peaxi162Scf00118g00214 Petunia axillaris HOM05D000003 ORTHO05D000006 9.9e-13 77.4 144 32.6
Ah.11g047370 Amaranthus hybridus HOM05D000003 ORTHO05D000004 2.9e-12 75.9 132 33.3
Peaxi162Scf00225g00086 Petunia axillaris HOM05D000003 ORTHO05D000004 3.8e-12 75.5 147 31.3
Ah.15g096670 Amaranthus hybridus HOM05D000003 ORTHO05D000283 4.9e-12 75.1 141 28.4
AUR62033088 Chenopodium quinoa HOM05D000003 ORTHO05D000283 6.4e-12 74.7 141 29.1
CANSAT11G1254 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-11 73.6 79 43.0
CANSAT21G0201 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-10 70.1 73 42.5
Peaxi162Scf00030g00212 Petunia axillaris HOM05D000003 ORTHO05D000283 1.6e-10 70.1 137 28.5
Peaxi162Scf00167g00211 Petunia axillaris HOM05D000003 ORTHO05D000283 5.1e-09 65.1 123 31.7
CANSAT21G0251 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-08 63.9 87 37.9
Ah.03g142580 Amaranthus hybridus HOM05D000003 ORTHO05D000004 1.5e-08 63.5 100 37.0
CANSAT78G2429 Cannabis sativa HOM05D000003 ORTHO05D000004 1.5e-08 63.5 116 31.0
Ah.13g072870 Amaranthus hybridus HOM05D019857 ORTHO05D006942 1.9e-08 63.2 129 30.2
CANSAT56G2611 Cannabis sativa HOM05D000003 ORTHO05D000004 3.3e-08 62.4 69 37.7
Rhsim10G0040700 Rhododendron simsii HOM05D000068 ORTHO05D000084 3.3e-08 62.4 136 29.4
CANSAT21G2126 Cannabis sativa HOM05D000003 ORTHO05D000004 4.3e-08 62.0 53 49.1
Oeu004429.1 Olea europaea HOM05D000003 ORTHO05D000004 4.3e-08 62.0 127 30.7
Nitab4.5_0002405g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000283 7.4e-08 61.2 113 31.0
Nitab4.5_0005313g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000283 7.4e-08 61.2 113 29.2
CANSAT54G2842 Cannabis sativa HOM05D000084 ORTHO05D002966 9.6e-08 60.8 55 47.3
Oeu062739.1 Olea europaea HOM05D007779 ORTHO05D009863 9.6e-08 60.8 128 32.0
Psat2g089560 Pisum sativum HOM05D000003 ORTHO05D000004 9.6e-08 60.8 101 37.6
Psat2g176280 Pisum sativum HOM05D000003 ORTHO05D000283 9.6e-08 60.8 101 37.6
Psat4g073240 Pisum sativum HOM05D000003 ORTHO05D000283 9.6e-08 60.8 101 37.6
Psat5g282280 Pisum sativum HOM05D000003 ORTHO05D000283 9.6e-08 60.8 101 37.6
Oeu003864.1 Olea europaea HOM05D000003 ORTHO05D000283 1.3e-07 60.5 127 31.5
Nitab4.5_0001488g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000283 1.6e-07 60.1 135 31.9
THA.LOC104815125 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 1.6e-07 60.1 149 27.5
Oeu060290.1 Olea europaea HOM05D000003 ORTHO05D000004 3.7e-07 58.9 117 33.3
Oeu011578.1 Olea europaea HOM05D000003 ORTHO05D000283 4.8e-07 58.5 105 33.3
Actinidia11782 Actinidia chinensis HOM05D000003 ORTHO05D000283 6.2e-07 58.2 103 33.0
Ah.14g081210 Amaranthus hybridus HOM05D034646 ORTHO05D000283 6.2e-07 58.2 100 34.0
ECA233G4110 Erigeron canadensis HOM05D000003 ORTHO05D000004 6.2e-07 58.2 139 28.8
Nitab4.5_0000719g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000283 6.2e-07 58.2 113 31.9
Nitab4.5_0001198g0280 Nicotiana tabacum HOM05D000003 ORTHO05D000283 8.1e-07 57.8 108 33.3
Ah.10g026120 Amaranthus hybridus HOM05D014553 ORTHO05D018255 1.1e-06 57.4 90 30.0
Psat5g261520 Pisum sativum HOM05D000003 ORTHO05D000283 1.1e-06 57.4 101 36.6
Psat0s4608g0040 Pisum sativum HOM05D000003 ORTHO05D000283 1.4e-06 57.0 101 34.7
BcaB06g27351 Brassica carinata HOM05D000003 ORTHO05D000283 2.4e-06 56.2 99 33.3
CANSAT01G2050 Cannabis sativa HOM05D000003 ORTHO05D000283 2.4e-06 56.2 119 27.7
CANSAT35G0342 Cannabis sativa HOM05D000003 ORTHO05D000004 2.4e-06 56.2 61 37.7
ECA246G5223 Erigeron canadensis HOM05D000003 ORTHO05D000283 2.4e-06 56.2 143 27.3
BcaC07g42435 Brassica carinata HOM05D000003 ORTHO05D000283 3.1e-06 55.8 101 31.7
BolC1t04577H Brassica oleracea HOM05D000003 ORTHO05D000283 3.1e-06 55.8 99 32.3
CANSAT21G1862 Cannabis sativa HOM05D000003 ORTHO05D000004 3.1e-06 55.8 54 40.7
ECA233G0347 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.1e-06 55.8 116 29.3
BcaC07g42553 Brassica carinata HOM05D000003 ORTHO05D000283 4.0e-06 55.5 145 31.7
BraA05t22446Z Brassica rapa HOM05D000003 ORTHO05D000283 4.0e-06 55.5 151 27.8
C01p15730 Brassica napus HOM05D000003 ORTHO05D000283 5.3e-06 55.1 141 27.7
BolC1t00682H Brassica oleracea HOM05D000003 ORTHO05D000283 5.3e-06 55.1 145 30.3
BolC1t01526H Brassica oleracea HOM05D000003 ORTHO05D000283 5.3e-06 55.1 141 27.7
BraA07t28678Z Brassica rapa HOM05D000003 ORTHO05D000283 5.3e-06 55.1 100 33.0
Oeu046207.1 Olea europaea HOM05D000003 ORTHO05D000283 5.3e-06 55.1 127 29.1
Aa31LG6G8950 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.9e-06 54.7 122 30.3
THA.LOC104799764 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 6.9e-06 54.7 39 59.0
Aa31LG3G8770 Aethionema arabicum HOM05D000003 ORTHO05D000283 9.0e-06 54.3 129 28.7
BcaNung02576 Brassica carinata HOM05D000003 ORTHO05D000283 9.0e-06 54.3 112 31.2
Nitab4.5_0002020g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000283 9.0e-06 54.3 113 29.2
Oeu045266.1 Olea europaea HOM05D000003 ORTHO05D000283 9.0e-06 54.3 128 29.7


User provided reference genes

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