Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G1486 Cannabis sativa HOM05D007348 ORTHO05D009257 4.6e-80 301.2 157 100.0
CANSAT35G0511 Cannabis sativa HOM05D007348 ORTHO05D009257 1.8e-44 183.0 138 77.5
Potri.006G087701 Populus trichocarpa HOM05D007348 ORTHO05D009257 6.5e-26 121.3 140 54.3
Prupe.6G258300 Prunus persica HOM05D007348 ORTHO05D009257 1.9e-25 119.8 136 56.6
Cfa017345 Carpinus fangiana HOM05D007348 ORTHO05D009257 1.2e-24 117.1 143 53.1
CSS0018490 Camellia sinensis var. sinensis HOM05D007348 ORTHO05D009257 1.6e-24 116.7 106 63.2
CiPaw.09G195200 Carya illinoinensis HOM05D007348 ORTHO05D009257 1.0e-23 114.0 146 52.1
Thecc.05G036200 Theobroma cacao HOM05D007348 ORTHO05D009257 1.8e-23 113.2 140 52.9
Dinv37151 Davidia involucrata HOM05D007348 ORTHO05D009257 2.3e-23 112.8 124 58.1
Lsat_1_v5_gn_9_32101 Lactuca sativa HOM05D007348 ORTHO05D009257 4.0e-23 112.1 99 65.7
MBI14_g08036_MAGBIO Magnolia biondii HOM05D007348 ORTHO05D009257 4.0e-23 112.1 100 65.0
Haze_20824 Corylus avellana HOM05D007348 ORTHO05D009257 5.2e-23 111.7 132 52.3
QL07p048913 Quercus lobata HOM05D007348 ORTHO05D009257 6.8e-23 111.3 141 54.6
RcHm_v2.0_Chr3g0466241 Rosa chinensis HOM05D007348 ORTHO05D009257 6.8e-23 111.3 110 62.7
Actinidia11269 Actinidia chinensis HOM05D007348 ORTHO05D009257 8.8e-23 110.9 122 58.2
Manes.08G081300 Manihot esculenta HOM05D007348 ORTHO05D009257 8.8e-23 110.9 115 54.8
COL.COLO4_14769 Corchorus olitorius HOM05D007348 ORTHO05D009257 1.2e-22 110.5 108 61.1
Glyma.07G134500 Glycine max HOM05D007348 ORTHO05D009257 1.2e-22 110.5 93 63.4
MD04G1131700 Malus domestica HOM05D007348 ORTHO05D009257 1.2e-22 110.5 110 59.1
Oeu006894.1 Olea europaea HOM05D007348 ORTHO05D009257 1.2e-22 110.5 111 59.5
A10p33440 Brassica napus HOM05D007348 ORTHO05D009257 1.5e-22 110.2 135 51.9
BraA10t45374Z Brassica rapa HOM05D007348 ORTHO05D009257 1.5e-22 110.2 135 51.9
LjContig00141g0000939 Lotus japonicus HOM05D007348 ORTHO05D009257 1.5e-22 110.2 97 63.9
Sabra06G0067000 Salix brachista HOM05D007348 ORTHO05D009257 1.5e-22 110.2 140 50.7
TAR636G0176 Trochodendron aralioides HOM05D007348 ORTHO05D009257 1.5e-22 110.2 132 54.5
Eucgr.K03108 Eucalyptus grandis HOM05D007348 ORTHO05D009257 2.0e-22 109.8 120 57.5
Phvul.008G118700 Phaseolus vulgaris HOM05D007348 ORTHO05D009257 2.0e-22 109.8 98 61.2
vmacro20175 Vaccinium macrocarpon HOM05D007348 ORTHO05D009257 2.0e-22 109.8 116 59.5
Ciclev10013090m.g Citrus clementina HOM05D007348 ORTHO05D009257 2.6e-22 109.4 128 55.5
ECA247G0870 Erigeron canadensis HOM05D007348 ORTHO05D009257 2.6e-22 109.4 99 61.6
Migut.L01962 Erythranthe guttata HOM05D007348 ORTHO05D009257 2.6e-22 109.4 115 58.3
Glyma.18G184000 Glycine max HOM05D007348 ORTHO05D009257 2.6e-22 109.4 98 60.2
MD12G1144800 Malus domestica HOM05D007348 ORTHO05D009257 2.6e-22 109.4 104 61.5
Cc06_g02390 Coffea canephora HOM05D007348 ORTHO05D009257 3.4e-22 109.0 140 49.3
TAR636G2125 Trochodendron aralioides HOM05D007348 ORTHO05D009257 3.4e-22 109.0 132 54.5
Gorai.006G171200 Gossypium raimondii HOM05D007348 ORTHO05D009257 4.4e-22 108.6 146 50.7
Nitab4.5_0008097g0010 Nicotiana tabacum HOM05D007348 ORTHO05D009257 4.4e-22 108.6 134 53.7
TWI77G0545 Tripterygium wilfordii HOM05D007348 ORTHO05D009257 5.7e-22 108.2 102 61.8
ClCG10G021280 Citrullus lanatus HOM05D007348 ORTHO05D009257 7.5e-22 107.8 113 56.6
Lalb_Chr01g0022591 Lupinus albus HOM05D007348 ORTHO05D009257 7.5e-22 107.8 139 48.9
C09p74340 Brassica napus HOM05D007348 ORTHO05D009257 9.8e-22 107.5 135 50.4
BolC9t60168H Brassica oleracea HOM05D007348 ORTHO05D009257 9.8e-22 107.5 135 50.4
SEGI_32371 Sequoiadendron giganteum HOM05D007348 ORTHO05D009257 9.8e-22 107.5 100 60.0
Ca_25900_v3 Cicer arietinum L. HOM05D007348 ORTHO05D009257 1.3e-21 107.1 109 57.8
Gohir.A09G154300 Gossypium hirsutum HOM05D007348 ORTHO05D009257 1.3e-21 107.1 146 50.0
HanXRQChr10g0298181 Helianthus annuus HOM05D007348 ORTHO05D009257 1.3e-21 107.1 122 54.1
SGA_v2.0_scaffold94G28573 Striga asiatica HOM05D007348 ORTHO05D009257 1.3e-21 107.1 93 69.9
VMungo1383G1736 Vigna mungo HOM05D007348 ORTHO05D009257 1.7e-21 106.7 99 59.6
Gohir.D09G150000 Gossypium hirsutum HOM05D007348 ORTHO05D009257 2.8e-21 105.9 146 48.6
PGR004G1504 Punica granatum HOM05D007348 ORTHO05D009257 2.8e-21 105.9 137 51.1
Migut.J00309 Erythranthe guttata HOM05D007348 ORTHO05D009257 4.8e-21 105.1 142 47.2
Nitab4.5_0000527g0200 Nicotiana tabacum HOM05D007348 ORTHO05D009257 4.8e-21 105.1 114 56.1
FAN05G4426 Fragaria x ananassa HOM05D007348 ORTHO05D009257 6.3e-21 104.8 102 62.7
Atru.chr8.2007 Acer truncatum HOM05D007348 ORTHO05D009257 8.3e-21 104.4 95 63.2
CAN.G92.20 Capsicum annuum HOM05D007348 ORTHO05D009257 8.3e-21 104.4 95 61.1
CDE07G1011 Ceratophyllum demersum HOM05D007348 ORTHO05D009257 8.3e-21 104.4 91 61.5
MELO3C009245.2 Cucumis melo HOM05D007348 ORTHO05D009257 8.3e-21 104.4 131 52.7
FvH4_6g13360 Fragaria vesca HOM05D007348 ORTHO05D009257 8.3e-21 104.4 128 53.1
FAN14G5390 Fragaria x ananassa HOM05D007348 ORTHO05D009257 8.3e-21 104.4 128 53.1
Peaxi162Scf00330g00089 Petunia axillaris HOM05D007348 ORTHO05D009257 8.3e-21 104.4 135 49.6
Aqoxy1G00895 Aquilegia oxysepala HOM05D007348 ORTHO05D009257 1.1e-20 104.0 90 64.4
PGSC0003DMG400019150 Solanum tuberosum HOM05D007348 ORTHO05D009257 1.1e-20 104.0 103 55.3
Duzib093G0801 Durio zibethinus HOM05D007348 ORTHO05D009257 1.4e-20 103.6 118 55.1
Sopen10g035960 Solanum pennellii HOM05D007348 ORTHO05D009257 1.4e-20 103.6 111 55.0
AT5G02160 Arabidopsis thaliana HOM05D007348 ORTHO05D009257 1.8e-20 103.2 98 61.2
Duzib106G1977 Durio zibethinus HOM05D007348 ORTHO05D009257 1.8e-20 103.2 113 55.8
Medtr7g062470 Medicago truncatula HOM05D007348 ORTHO05D009257 1.8e-20 103.2 83 65.1
Psat3g137840 Pisum sativum HOM05D007348 ORTHO05D009257 1.8e-20 103.2 120 47.5
Sc01g0004470 Simmondsia chinensis HOM05D007348 ORTHO05D009257 1.8e-20 103.2 114 54.4
Nn2g13409 Nelumbo nucifera HOM05D007348 ORTHO05D009257 2.4e-20 102.8 86 65.1
Sed0022418 Sechium edule HOM05D007348 ORTHO05D009257 2.4e-20 102.8 111 56.8
Solyc10g086570.3 Solanum lycopersicum HOM05D007348 ORTHO05D009257 2.4e-20 102.8 112 56.2
Zm00001eb355890 Zea mays HOM05D007348 ORTHO05D009257 2.4e-20 102.8 77 70.1
Thhalv10014990m.g Eutrema salsugineum HOM05D007348 ORTHO05D009257 3.1e-20 102.4 83 67.5
unitig_21.g21015 Utricularia gibba HOM05D007348 ORTHO05D009257 3.1e-20 102.4 102 58.8
CsaV3_3G034760 Cucumis sativus L. HOM05D007348 ORTHO05D009257 4.1e-20 102.1 131 51.9
Aa31LG1G22570 Aethionema arabicum HOM05D007348 ORTHO05D009257 5.4e-20 101.7 128 51.6
Cpa.g.sc169.14 Carica papaya HOM05D007348 ORTHO05D009257 5.4e-20 101.7 134 46.3
THA.LOC104816258 Tarenaya hassleriana HOM05D007348 ORTHO05D009257 5.4e-20 101.7 83 66.3
Ah.12g059960 Amaranthus hybridus HOM05D007348 ORTHO05D009257 7.0e-20 101.3 124 49.2
Hund09099 Selenicereus undatus HOM05D007348 ORTHO05D009257 7.0e-20 101.3 94 60.6
GSVIVG01034135001 Vitis vinifera HOM05D007348 ORTHO05D009257 7.0e-20 101.3 137 48.9
CDE04G2102 Ceratophyllum demersum HOM05D000082 ORTHO05D001639 9.1e-20 100.9 91 59.3
Sp6g40280 Schrenkiella parvula HOM05D007348 ORTHO05D009257 9.1e-20 100.9 134 48.5
ATR0559G267 Amborella trichopoda HOM05D007348 ORTHO05D009257 1.2e-19 100.5 104 55.8
AL6G11390 Arabidopsis lyrata HOM05D007348 ORTHO05D009257 1.2e-19 100.5 83 67.5
arahy.Tifrunner.gnm1.ann1.HF038C Arachis hypogaea HOM05D007348 ORTHO05D009257 1.6e-19 100.1 83 63.9
arahy.Tifrunner.gnm1.ann1.IF8W7F Arachis hypogaea HOM05D007348 ORTHO05D009257 1.6e-19 100.1 83 63.9
EL10As1g23094 Beta vulgaris HOM05D007348 ORTHO05D009257 1.6e-19 100.1 82 65.9
FAN02G3968 Fragaria x ananassa HOM05D007348 ORTHO05D009257 1.6e-19 100.1 134 49.3
AUR62042385 Chenopodium quinoa HOM05D007348 ORTHO05D009257 2.0e-19 99.8 83 65.1
FAN09G3409 Fragaria x ananassa HOM05D007348 ORTHO05D009257 2.7e-19 99.4 128 50.8
CARHR211200 Cardamine hirsuta HOM05D007348 ORTHO05D009257 4.5e-19 98.6 123 51.2
Os05g0110100 Oryza sativa ssp. japonica HOM05D007348 ORTHO05D009257 4.5e-19 98.6 104 54.8
Carub.0006s0100 Capsella rubella HOM05D007348 ORTHO05D009257 7.7e-19 97.8 83 65.1
Pp3c13_7350 Physcomitrium patens HOM05D007348 ORTHO05D009257 2.9e-18 95.9 87 60.9
HPP92_026789 Vanilla planifolia HOM05D007348 ORTHO05D009257 5.0e-18 95.1 77 67.5
PSO339G0488 Papaver somniferum HOM05D007348 ORTHO05D009257 6.5e-18 94.7 99 56.6
PSO063G2704 Papaver somniferum HOM05D007348 ORTHO05D009257 2.5e-17 92.8 129 48.8
Pp3c3_5420 Physcomitrium patens HOM05D007348 ORTHO05D009257 5.5e-17 91.7 86 58.1
SMO174G0219 Selaginella moellendorffii HOM05D007348 ORTHO05D009257 2.8e-16 89.4 77 61.0
Mapoly0046s0114 Marchantia polymorpha HOM05D007348 ORTHO05D009257 8.0e-16 87.8 141 46.8
CBR_g52180 Chara braunii HOM05D007348 ORTHO05D009257 1.8e-12 76.6 82 56.1
TPR.G1710 Trifolium pratense HOM05D007348 ORTHO05D009257 4.0e-07 58.9 62 54.8
TPR.G27019 Trifolium pratense HOM05D007348 ORTHO05D009257 6.8e-07 58.2 45 62.2


User provided reference genes

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