Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G1406 Cannabis sativa HOM05D007033 ORTHO05D008770 9.4e-65 250.0 121 100.0
FvH4_7g07210 Fragaria vesca HOM05D007033 ORTHO05D008770 2.3e-47 192.2 110 79.1
FAN03G2679 Fragaria x ananassa HOM05D007033 ORTHO05D008770 4.0e-47 191.4 110 79.1
FAN06G3925 Fragaria x ananassa HOM05D007033 ORTHO05D008770 6.8e-47 190.7 110 78.2
RcHm_v2.0_Chr1g0337311 Rosa chinensis HOM05D007033 ORTHO05D008770 2.0e-46 189.1 110 75.5
MD07G1078200 Malus domestica HOM05D007033 ORTHO05D008770 4.4e-46 188.0 111 75.7
Actinidia21596 Actinidia chinensis HOM05D007033 ORTHO05D008770 1.1e-44 183.3 116 74.1
MD02G1238400 Malus domestica HOM05D007033 ORTHO05D008770 1.4e-44 183.0 107 76.6
Prupe.2G100000 Prunus persica HOM05D007033 ORTHO05D008770 4.1e-44 181.4 108 72.2
Haze_15805 Corylus avellana HOM05D007033 ORTHO05D008770 9.1e-44 180.3 109 72.5
Dinv43975 Davidia involucrata HOM05D007033 ORTHO05D008770 1.6e-43 179.5 100 74.0
PGR042G3214 Punica granatum HOM05D007033 ORTHO05D008770 1.6e-43 179.5 112 69.6
Eucgr.E01772 Eucalyptus grandis HOM05D007033 ORTHO05D008770 2.7e-43 178.7 104 76.0
Ciclev10033075m.g Citrus clementina HOM05D007033 ORTHO05D008770 4.5e-43 177.9 118 66.1
Carub.0006s1585 Capsella rubella HOM05D007033 ORTHO05D008770 7.7e-43 177.2 119 66.4
GSVIVG01011318001 Vitis vinifera HOM05D007033 ORTHO05D008770 1.0e-42 176.8 114 67.5
Aqoxy5G03237 Aquilegia oxysepala HOM05D007033 ORTHO05D008770 6.5e-42 174.1 119 67.2
arahy.Tifrunner.gnm1.ann1.14YBGE Arachis hypogaea HOM05D007033 ORTHO05D008770 6.5e-42 174.1 113 69.9
arahy.Tifrunner.gnm1.ann1.GIK8C1 Arachis hypogaea HOM05D007033 ORTHO05D008770 6.5e-42 174.1 113 69.9
CsaV3_3G010550 Cucumis sativus L. HOM05D007033 ORTHO05D008770 8.5e-42 173.7 112 68.8
Rhsim12G0078100 Rhododendron simsii HOM05D007033 ORTHO05D008770 1.1e-41 173.3 114 69.3
MELO3C006276.2 Cucumis melo HOM05D007033 ORTHO05D008770 1.5e-41 172.9 112 68.8
ClCG05G002970 Citrullus lanatus HOM05D007033 ORTHO05D008770 2.5e-41 172.2 112 67.9
AL6G28700 Arabidopsis lyrata HOM05D007033 ORTHO05D008770 5.5e-41 171.0 110 68.2
AT5G17610 Arabidopsis thaliana HOM05D007033 ORTHO05D008770 5.5e-41 171.0 119 63.9
Hma1.2p1_0353F.1_g133340 Hydrangea macrophylla HOM05D007033 ORTHO05D008770 7.2e-41 170.6 107 66.4
BcaC03g13530 Brassica carinata HOM05D007033 ORTHO05D008770 9.5e-41 170.2 110 67.3
BolC2t06829H Brassica oleracea HOM05D007033 ORTHO05D008770 9.5e-41 170.2 110 67.3
C02p09210 Brassica napus HOM05D007033 ORTHO05D008770 1.2e-40 169.9 110 66.4
Potri.013G073100 Populus trichocarpa HOM05D007033 ORTHO05D008770 1.2e-40 169.9 114 66.7
Sp6g26610 Schrenkiella parvula HOM05D007033 ORTHO05D008770 1.6e-40 169.5 111 64.9
A02p04360 Brassica napus HOM05D007033 ORTHO05D008770 2.1e-40 169.1 110 66.4
BraA02t05400Z Brassica rapa HOM05D007033 ORTHO05D008770 2.1e-40 169.1 110 66.4
THA.LOC104827245 Tarenaya hassleriana HOM05D007033 ORTHO05D008770 2.1e-40 169.1 119 64.7
CiPaw.02G048600 Carya illinoinensis HOM05D007033 ORTHO05D008770 4.7e-40 167.9 109 69.7
Thhalv10014961m.g Eutrema salsugineum HOM05D007033 ORTHO05D008770 4.7e-40 167.9 111 63.1
Cc02_g26390 Coffea canephora HOM05D007033 ORTHO05D008770 6.1e-40 167.5 121 62.0
Lj3g0004375 Lotus japonicus HOM05D007033 ORTHO05D008770 6.1e-40 167.5 98 74.5
Sed0003013 Sechium edule HOM05D007033 ORTHO05D008770 6.1e-40 167.5 113 65.5
TWI60G0127 Tripterygium wilfordii HOM05D007033 ORTHO05D008770 8.0e-40 167.2 120 63.3
Manes.08G157600 Manihot esculenta HOM05D007033 ORTHO05D008770 1.0e-39 166.8 108 73.1
CARHR195570 Cardamine hirsuta HOM05D007033 ORTHO05D008770 1.8e-39 166.0 111 64.0
VMungo0331G1478 Vigna mungo HOM05D007033 ORTHO05D008770 1.8e-39 166.0 110 70.0
Nn3g19225 Nelumbo nucifera HOM05D007033 ORTHO05D008770 2.3e-39 165.6 118 63.6
Gohir.D13G100400 Gossypium hirsutum HOM05D007033 ORTHO05D008770 3.0e-39 165.2 114 64.9
Gorai.013G112100 Gossypium raimondii HOM05D007033 ORTHO05D008770 3.0e-39 165.2 114 64.9
Thecc.05G231700 Theobroma cacao HOM05D007033 ORTHO05D008770 3.0e-39 165.2 113 67.3
EL10Ac1g00673 Beta vulgaris HOM05D007033 ORTHO05D008770 4.0e-39 164.9 120 64.2
PSO063G1631 Papaver somniferum HOM05D007033 ORTHO05D008770 5.2e-39 164.5 117 61.5
MBI16_g43713_MAGBIO Magnolia biondii HOM05D007033 ORTHO05D008770 6.8e-39 164.1 93 74.2
PSO782G0028 Papaver somniferum HOM05D007033 ORTHO05D008770 8.8e-39 163.7 114 62.3
Gohir.A13G085300 Gossypium hirsutum HOM05D007033 ORTHO05D008770 1.2e-38 163.3 114 64.9
Glyma.03G098200 Glycine max HOM05D007033 ORTHO05D008770 1.5e-38 162.9 110 65.5
Phvul.010G038500 Phaseolus vulgaris HOM05D007033 ORTHO05D008770 2.0e-38 162.5 110 67.3
Glyma.07G123600 Glycine max HOM05D007033 ORTHO05D008770 3.4e-38 161.8 110 64.5
TPR.G17361 Trifolium pratense HOM05D007033 ORTHO05D008770 4.4e-38 161.4 113 67.3
Solyc01g081200.3 Solanum lycopersicum HOM05D007033 ORTHO05D008770 5.7e-38 161.0 114 63.2
BcaC04g18775 Brassica carinata HOM05D007033 ORTHO05D008770 7.5e-38 160.6 113 65.5
C09p59560 Brassica napus HOM05D007033 ORTHO05D008770 7.5e-38 160.6 113 65.5
BolC9t58794H Brassica oleracea HOM05D007033 ORTHO05D008770 7.5e-38 160.6 113 65.5
CDE12G0505 Ceratophyllum demersum HOM05D007033 ORTHO05D008770 9.8e-38 160.2 109 67.9
Sopen01g032780 Solanum pennellii HOM05D007033 ORTHO05D008770 9.8e-38 160.2 114 63.2
PGSC0003DMG400001787 Solanum tuberosum HOM05D007033 ORTHO05D008770 9.8e-38 160.2 114 64.9
Sed0002871 Sechium edule HOM05D007033 ORTHO05D008770 1.3e-37 159.8 111 66.7
vmacro21112 Vaccinium macrocarpon HOM05D007033 ORTHO05D008770 1.3e-37 159.8 86 77.9
Lalb_Chr12g0210181 Lupinus albus HOM05D007033 ORTHO05D008770 2.2e-37 159.1 113 65.5
CAN.G700.33 Capsicum annuum HOM05D007033 ORTHO05D008770 2.8e-37 158.7 113 64.6
Peaxi162Scf00592g00448 Petunia axillaris HOM05D007033 ORTHO05D008770 3.7e-37 158.3 113 62.8
Cfa003682 Carpinus fangiana HOM05D007033 ORTHO05D008770 1.1e-36 156.8 127 59.1
Migut.B01441 Erythranthe guttata HOM05D007033 ORTHO05D008770 1.4e-36 156.4 111 60.4
Lsat_1_v5_gn_4_42281 Lactuca sativa HOM05D007033 ORTHO05D008770 1.4e-36 156.4 107 65.4
ECA234G3633 Erigeron canadensis HOM05D007033 ORTHO05D008770 3.1e-36 155.2 114 62.3
HanXRQChr03g0088201 Helianthus annuus HOM05D007033 ORTHO05D008770 5.4e-36 154.5 113 61.9
Sc23g0004770 Simmondsia chinensis HOM05D007033 ORTHO05D008770 5.4e-36 154.5 106 65.1
SGA_v2.0_scaffold98G29399 Striga asiatica HOM05D007033 ORTHO05D008770 1.2e-35 153.3 135 56.3
Sabra13G0063200 Salix brachista HOM05D007033 ORTHO05D008770 1.6e-35 152.9 104 66.3
Zm00001eb009070 Zea mays HOM05D007033 ORTHO05D008770 1.6e-35 152.9 108 63.0
Hund17162 Selenicereus undatus HOM05D007033 ORTHO05D008770 4.5e-35 151.4 105 61.9
QL04p052404 Quercus lobata HOM05D007033 ORTHO05D008770 1.0e-34 150.2 87 72.4
HPP92_003404 Vanilla planifolia HOM05D007033 ORTHO05D008770 3.8e-34 148.3 113 63.7
HPP92_003427 Vanilla planifolia HOM05D007033 ORTHO05D008770 3.8e-34 148.3 113 63.7
COL.COLO4_08541 Corchorus olitorius HOM05D007033 ORTHO05D008770 1.5e-33 146.4 99 67.7
MBI16_g43476_MAGBIO Magnolia biondii HOM05D007033 ORTHO05D008770 1.2e-32 143.3 73 80.8
ATR0829G185 Amborella trichopoda HOM05D007033 ORTHO05D008770 1.6e-32 142.9 81 75.3
unitig_8.g3853 Utricularia gibba HOM05D007033 ORTHO05D008770 1.4e-31 139.8 113 54.0
SalBow5G2417 Salvia bowleyana HOM05D007033 ORTHO05D008770 3.0e-31 138.7 98 66.3
Psat4g215800 Pisum sativum HOM05D007033 ORTHO05D008770 6.8e-31 137.5 102 59.8
Nitab4.5_0004594g0020 Nicotiana tabacum HOM05D007033 ORTHO05D008770 1.2e-30 136.7 95 64.2
Nitab4.5_0004800g0080 Nicotiana tabacum HOM05D007033 ORTHO05D008770 2.2e-29 132.5 94 62.8
Ah.05g177250 Amaranthus hybridus HOM05D007033 ORTHO05D008770 2.4e-28 129.0 108 57.4
BraA10t44240Z Brassica rapa HOM05D007033 ORTHO05D008770 2.4e-28 129.0 99 57.6
AUR62014520 Chenopodium quinoa HOM05D007033 ORTHO05D008770 1.2e-27 126.7 100 60.0
Sc23g0004660 Simmondsia chinensis HOM05D007033 ORTHO05D008770 5.9e-27 124.4 114 53.5
AUR62038014 Chenopodium quinoa HOM05D007033 ORTHO05D008770 1.0e-26 123.6 100 59.0
SEGI_14041 Sequoiadendron giganteum HOM05D007033 ORTHO05D008770 6.2e-24 114.4 100 54.0
HPP92_025932 Vanilla planifolia HOM05D007033 ORTHO05D008770 1.4e-23 113.2 113 50.4
SMO351G0381 Selaginella moellendorffii HOM05D007033 ORTHO05D008770 6.8e-23 110.9 112 44.6
AagrBONN_evm.TU.Sc2ySwM_368.1536 Anthoceros agrestis HOM05D007033 ORTHO05D008770 2.0e-22 109.4 101 48.5
A10p21800 Brassica napus HOM05D007033 ORTHO05D008770 2.9e-21 105.5 57 73.7
Mapoly0058s0110 Marchantia polymorpha HOM05D007033 ORTHO05D008770 2.9e-21 105.5 104 45.2
Pp3c19_9960 Physcomitrium patens HOM05D007033 ORTHO05D008770 3.2e-20 102.1 86 52.3
Pp3c7_5640 Physcomitrium patens HOM05D007033 ORTHO05D008770 3.5e-19 98.6 74 55.4
TAR629G3499 Trochodendron aralioides HOM05D007033 ORTHO05D008770 3.5e-19 98.6 53 75.5
Pp3c18_1710 Physcomitrium patens HOM05D007033 ORTHO05D008770 2.3e-18 95.9 110 44.5
Atru.chr2.1689 Acer truncatum HOM05D007033 ORTHO05D008770 9.8e-14 80.5 44 72.7
Sopen05g015510 Solanum pennellii HOM05D007033 ORTHO05D008770 6.0e-11 71.2 48 58.3
MCO10G230 Micromonas commoda HOM05D007033 ORTHO05D008770 6.6e-10 67.8 98 34.7
CBR_g44313 Chara braunii HOM05D007033 ORTHO05D008770 4.3e-09 65.1 63 46.0
Peaxi162Scf00117g01735 Petunia axillaris HOM05D007033 ORTHO05D008770 4.3e-09 65.1 89 41.6
CBR_g49607 Chara braunii HOM05D007033 ORTHO05D008770 2.1e-08 62.8 63 46.0
PRCOL_00006026 Prasinoderma coloniale HOM05D007033 ORTHO05D008770 1.8e-07 59.7 40 52.5


User provided reference genes

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