Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G1333 Cannabis sativa HOM05D006133 ORTHO05D007855 2.5e-60 236.1 214 100.0
CiPaw.09G059200 Carya illinoinensis HOM05D006133 ORTHO05D007855 3.8e-45 185.7 175 61.1
Thecc.06G188500 Theobroma cacao HOM05D006133 ORTHO05D007855 5.0e-45 185.3 175 58.9
QL05p040164 Quercus lobata HOM05D006133 ORTHO05D007855 6.6e-45 184.9 174 60.3
Haze_06477 Corylus avellana HOM05D006133 ORTHO05D007855 8.6e-45 184.5 175 58.3
Manes.16G026900 Manihot esculenta HOM05D006133 ORTHO05D007855 1.5e-44 183.7 175 58.9
Atru.chr10.1894 Acer truncatum HOM05D006133 ORTHO05D007855 1.2e-43 180.6 175 57.7
COL.COLO4_31481 Corchorus olitorius HOM05D006133 ORTHO05D007855 1.2e-43 180.6 174 58.0
Gorai.011G027600 Gossypium raimondii HOM05D006133 ORTHO05D007855 3.6e-43 179.1 175 56.6
Actinidia05630 Actinidia chinensis HOM05D006133 ORTHO05D007855 6.1e-43 178.3 175 61.7
Cfa000437 Carpinus fangiana HOM05D006133 ORTHO05D007855 6.1e-43 178.3 175 57.7
TWI38G1277 Tripterygium wilfordii HOM05D006133 ORTHO05D007855 8.0e-43 177.9 175 58.9
Cc02_g13300 Coffea canephora HOM05D006133 ORTHO05D007855 1.4e-42 177.2 175 56.0
Gohir.A10G025600 Gossypium hirsutum HOM05D006133 ORTHO05D007855 1.8e-42 176.8 175 55.4
Potri.004G042800 Populus trichocarpa HOM05D006133 ORTHO05D007855 2.3e-42 176.4 175 57.7
Hma1.2p1_0785F.1_g217580 Hydrangea macrophylla HOM05D006133 ORTHO05D007855 6.8e-42 174.9 174 56.3
Dinv40551 Davidia involucrata HOM05D006133 ORTHO05D007855 1.5e-41 173.7 175 57.1
Potri.011G051900 Populus trichocarpa HOM05D006133 ORTHO05D007855 1.5e-41 173.7 175 76.6
Cpa.g.sc27.45 Carica papaya HOM05D006133 ORTHO05D007855 4.4e-41 172.2 171 55.6
HanXRQChr16g0517711 Helianthus annuus HOM05D006133 ORTHO05D007855 9.8e-41 171.0 175 66.3
ClCG03G006010 Citrullus lanatus HOM05D006133 ORTHO05D007855 1.3e-40 170.6 174 54.6
Migut.M01145 Erythranthe guttata HOM05D006133 ORTHO05D007855 2.2e-40 169.9 175 55.4
MELO3C002599.2 Cucumis melo HOM05D006133 ORTHO05D007855 2.9e-40 169.5 174 54.6
CsaV3_1G012270 Cucumis sativus L. HOM05D006133 ORTHO05D007855 2.9e-40 169.5 174 54.6
Lj1A1206T67 Lonicera japonica HOM05D006133 ORTHO05D007855 4.9e-40 168.7 175 55.4
Lj4g0021405 Lotus japonicus HOM05D006133 ORTHO05D007855 4.9e-40 168.7 174 54.6
Duzib235G0895 Durio zibethinus HOM05D006133 ORTHO05D007855 8.3e-40 167.9 169 55.6
ECA234G2723 Erigeron canadensis HOM05D006133 ORTHO05D007855 8.3e-40 167.9 175 54.9
Glyma.13G179800 Glycine max HOM05D006133 ORTHO05D007855 8.3e-40 167.9 174 55.2
Cc01_g03530 Coffea canephora HOM05D006133 ORTHO05D007855 1.1e-39 167.5 167 56.3
Glyma.07G196100 Glycine max HOM05D006133 ORTHO05D007855 1.4e-39 167.2 174 54.6
CSS0047692 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 1.8e-39 166.8 175 54.3
Phvul.002G234200 Phaseolus vulgaris HOM05D006133 ORTHO05D007855 2.4e-39 166.4 174 55.2
Hund23730 Selenicereus undatus HOM05D006133 ORTHO05D007855 3.2e-39 166.0 175 54.9
Hund23731 Selenicereus undatus HOM05D006133 ORTHO05D007855 3.2e-39 166.0 175 54.9
Lsat_1_v5_gn_4_52940 Lactuca sativa HOM05D006133 ORTHO05D007855 4.1e-39 165.6 175 63.4
Prupe.4G046300 Prunus persica HOM05D006133 ORTHO05D007855 4.1e-39 165.6 175 53.7
VMungo0251G0712 Vigna mungo HOM05D006133 ORTHO05D007855 7.0e-39 164.9 174 54.6
FvH4_3g09320 Fragaria vesca HOM05D006133 ORTHO05D007855 1.2e-38 164.1 175 54.9
Nitab4.5_0003432g0010 Nicotiana tabacum HOM05D006133 ORTHO05D007855 3.5e-38 162.5 174 55.2
Medtr4g088855 Medicago truncatula HOM05D006133 ORTHO05D007855 5.9e-38 161.8 174 54.0
RcHm_v2.0_Chr5g0008281 Rosa chinensis HOM05D006133 ORTHO05D007855 7.8e-38 161.4 170 54.1
TPR.G12027 Trifolium pratense HOM05D006133 ORTHO05D007855 7.8e-38 161.4 174 54.0
TAR628G0719 Trochodendron aralioides HOM05D006133 ORTHO05D007855 1.0e-37 161.0 175 53.1
Nitab4.5_0007940g0050 Nicotiana tabacum HOM05D006133 ORTHO05D007855 1.3e-37 160.6 174 54.6
PGSC0003DMG400029689 Solanum tuberosum HOM05D006133 ORTHO05D007855 1.3e-37 160.6 174 63.8
CSS0042278 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 2.3e-37 159.8 174 58.0
arahy.Tifrunner.gnm1.ann1.Y5A5WX Arachis hypogaea HOM05D006133 ORTHO05D007855 3.0e-37 159.5 173 59.5
MBI09_g12165_MAGBIO Magnolia biondii HOM05D006133 ORTHO05D007855 3.9e-37 159.1 174 51.7
Peaxi162Scf00736g00427 Petunia axillaris HOM05D006133 ORTHO05D007855 3.9e-37 159.1 185 51.9
Sopen02g023140 Solanum pennellii HOM05D006133 ORTHO05D007855 3.9e-37 159.1 174 61.5
unitig_22.g6229 Utricularia gibba HOM05D006133 ORTHO05D007855 6.6e-37 158.3 174 53.4
CAN.G1164.26 Capsicum annuum HOM05D006133 ORTHO05D007855 1.5e-36 157.1 174 61.5
Ca_18541_v3 Cicer arietinum L. HOM05D006133 ORTHO05D007855 2.5e-36 156.4 174 52.9
THA.LOC104814218 Tarenaya hassleriana HOM05D006133 ORTHO05D007855 4.3e-36 155.6 173 50.9
AUR62017011 Chenopodium quinoa HOM05D006133 ORTHO05D007855 5.6e-36 155.2 175 52.0
Carub.0004s1546 Capsella rubella HOM05D006133 ORTHO05D007855 1.6e-35 153.7 175 50.3
Sc05g0007700 Simmondsia chinensis HOM05D006133 ORTHO05D007855 2.8e-35 152.9 175 51.4
PSO478G5317 Papaver somniferum HOM05D006133 ORTHO05D007855 3.6e-35 152.5 174 49.4
Solyc02g078280.3 Solanum lycopersicum HOM05D006133 ORTHO05D007855 3.6e-35 152.5 170 61.8
AUR62014816 Chenopodium quinoa HOM05D006133 ORTHO05D007855 1.0e-34 151.0 175 50.9
arahy.Tifrunner.gnm1.ann1.YAJ938 Arachis hypogaea HOM05D006133 ORTHO05D007855 1.4e-34 150.6 185 50.3
Oeu057904.1 Olea europaea HOM05D006133 ORTHO05D007855 1.4e-34 150.6 175 51.4
FAN16G1924 Fragaria x ananassa HOM05D006133 ORTHO05D007855 1.8e-34 150.2 180 51.7
Sabra11G0035700 Salix brachista HOM05D006133 ORTHO05D007855 1.8e-34 150.2 175 77.7
AL4G29540 Arabidopsis lyrata HOM05D006133 ORTHO05D007855 2.3e-34 149.8 176 54.0
PSO478G1675 Papaver somniferum HOM05D006133 ORTHO05D007855 2.3e-34 149.8 174 48.3
Nn1g08778 Nelumbo nucifera HOM05D006133 ORTHO05D007855 4.0e-34 149.1 175 50.3
ATR0584G083 Amborella trichopoda HOM05D006133 ORTHO05D007855 1.5e-33 147.1 168 48.2
CARHR127900 Cardamine hirsuta HOM05D006133 ORTHO05D007855 3.7e-32 142.5 176 48.3
Ah.09g237330 Amaranthus hybridus HOM05D006133 ORTHO05D007855 1.9e-31 140.2 188 47.3
BcaC02g07769 Brassica carinata HOM05D006133 ORTHO05D007855 2.4e-31 139.8 175 47.4
AT2G33793 Arabidopsis thaliana HOM05D006133 ORTHO05D007855 5.4e-31 138.7 176 47.7
BolC4t27810H Brassica oleracea HOM05D006133 ORTHO05D007855 5.4e-31 138.7 176 47.2
PGR004G1018 Punica granatum HOM05D006133 ORTHO05D007855 5.4e-31 138.7 175 77.1
Gohir.D10G026300 Gossypium hirsutum HOM05D006133 ORTHO05D007855 9.2e-31 137.9 93 74.2
MD05G1313300 Malus domestica HOM05D006133 ORTHO05D007855 9.2e-31 137.9 93 73.1
Dinv07556 Davidia involucrata HOM05D006133 ORTHO05D007855 3.5e-30 136.0 93 75.3
GSVIVG01033625001 Vitis vinifera HOM05D006133 ORTHO05D007855 1.0e-29 134.4 169 75.1
Thhalv10017234m.g Eutrema salsugineum HOM05D006133 ORTHO05D007855 9.5e-28 127.9 176 46.0
Solyc02g078290.4 Solanum lycopersicum HOM05D006133 ORTHO05D007855 1.6e-27 127.1 92 71.7
Sed0025328 Sechium edule HOM05D006133 ORTHO05D007855 2.8e-27 126.3 93 69.9
Lalb_Chr05g0218461 Lupinus albus HOM05D006133 ORTHO05D007855 3.6e-27 125.9 175 70.9
Sp4g16180 Schrenkiella parvula HOM05D006133 ORTHO05D007855 2.3e-26 123.2 176 49.4
CDE04G1633 Ceratophyllum demersum HOM05D006133 ORTHO05D007855 5.2e-26 122.1 175 41.7
Rhsim13G0177600 Rhododendron simsii HOM05D006133 ORTHO05D007855 1.5e-25 120.6 218 39.4
SMO353G0258 Selaginella moellendorffii HOM05D006133 ORTHO05D007855 1.5e-25 120.6 167 40.7
Ciclev10017918m.g Citrus clementina HOM05D006133 ORTHO05D007855 2.6e-25 119.8 145 48.3
Os03g0837800 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 5.8e-25 118.6 174 40.2
FAN11G1298 Fragaria x ananassa HOM05D006133 ORTHO05D007855 2.2e-24 116.7 156 46.2
EL10Ac8g20377 Beta vulgaris HOM05D006133 ORTHO05D007855 3.7e-24 115.9 146 47.9
Zm00001eb063880 Zea mays HOM05D006133 ORTHO05D007855 8.3e-24 114.8 174 38.5
Psat7g113640 Pisum sativum HOM05D006133 ORTHO05D007855 1.4e-23 114.0 174 43.1
BraA04t18104Z Brassica rapa HOM05D006133 ORTHO05D007855 5.4e-23 112.1 92 63.0
FAN25G2154 Fragaria x ananassa HOM05D006133 ORTHO05D007855 5.4e-23 112.1 146 45.9
SGA_v2.0_scaffold22G09717 Striga asiatica HOM05D006133 ORTHO05D007855 7.1e-23 111.7 179 55.3
AagrBONN_evm.TU.Sc2ySwM_228.202 Anthoceros agrestis HOM05D006133 ORTHO05D007855 2.7e-22 109.8 168 36.9
C04p63360 Brassica napus HOM05D006133 ORTHO05D007855 4.6e-22 109.0 92 60.9
FAN21G1061 Fragaria x ananassa HOM05D006133 ORTHO05D007855 4.6e-22 109.0 144 45.8
BolC4t23106H Brassica oleracea HOM05D006133 ORTHO05D007855 1.5e-20 104.0 172 40.1
C04p15330 Brassica napus HOM05D006133 ORTHO05D007855 3.3e-20 102.8 151 42.4
A04p26010 Brassica napus HOM05D006133 ORTHO05D007855 2.1e-19 100.1 176 39.2
BcaC02g11457 Brassica carinata HOM05D006133 ORTHO05D007855 1.4e-18 97.4 151 41.1
Cpa.g.sc39.10 Carica papaya HOM05D006133 ORTHO05D007855 2.3e-18 96.7 93 59.1
Cc01_g03500 Coffea canephora HOM05D006133 ORTHO05D007855 5.8e-17 92.0 178 38.8
DCAR_028075 Daucus carota HOM05D006133 ORTHO05D007855 5.8e-17 92.0 146 46.6
Mapoly0103s0052 Marchantia polymorpha HOM05D006133 ORTHO05D007855 3.8e-16 89.4 169 30.2
HPP92_006840 Vanilla planifolia HOM05D006133 ORTHO05D007855 3.2e-15 86.3 66 69.7
Os07g0256300 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 8.6e-13 78.2 94 46.8
Gohir.A01G166500 Gossypium hirsutum HOM05D006133 ORTHO05D007855 7.3e-12 75.1 51 72.5
SGA_v2.0_scaffold499G52489 Striga asiatica HOM05D006133 ORTHO05D007855 1.1e-10 71.2 172 34.9
Os07g0208801 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 1.5e-09 67.4 62 50.0
Zm00001eb304600 Zea mays HOM05D006133 ORTHO05D007855 9.9e-09 64.7 153 28.1
Gohir.A11G286823 Gossypium hirsutum HOM05D006133 ORTHO05D007855 3.2e-07 59.7 41 78.0
Zm00001eb131680 Zea mays HOM05D006133 ORTHO05D446205 7.1e-07 58.5 63 47.6
Zm00001eb225310 Zea mays HOM05D000901 ORTHO05D005921 7.1e-07 58.5 63 47.6
C04p15300 Brassica napus HOM05D006133 ORTHO05D007855 4.6e-06 55.8 37 75.7


User provided reference genes

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