Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G1332 Cannabis sativa HOM05D006168 ORTHO05D007602 2.5e-72 275.4 145 100.0
CiPaw.16G075600 Carya illinoinensis HOM05D006168 ORTHO05D007602 3.9e-49 198.4 142 73.2
Gohir.A05G294800 Gossypium hirsutum HOM05D006168 ORTHO05D007602 2.5e-48 195.7 147 72.1
GSVIVG01024249001 Vitis vinifera HOM05D006168 ORTHO05D007602 2.5e-48 195.7 143 72.0
Sabra04G0045100 Salix brachista HOM05D006168 ORTHO05D007602 9.6e-48 193.7 151 68.9
Potri.004G067300 Populus trichocarpa HOM05D006168 ORTHO05D007602 1.2e-47 193.4 151 68.9
Duzib128G1786 Durio zibethinus HOM05D006168 ORTHO05D007602 2.1e-47 192.6 147 70.1
Prupe.5G244900 Prunus persica HOM05D006168 ORTHO05D007602 2.1e-47 192.6 146 71.9
COL.COLO4_12167 Corchorus olitorius HOM05D006168 ORTHO05D007602 2.8e-47 192.2 149 70.5
Gohir.D05G295400 Gossypium hirsutum HOM05D006168 ORTHO05D007602 2.8e-47 192.2 147 71.4
Thecc.10G078900 Theobroma cacao HOM05D006168 ORTHO05D007602 2.8e-47 192.2 149 69.1
Manes.02G226600 Manihot esculenta HOM05D006168 ORTHO05D007602 6.2e-47 191.0 139 73.4
Duzib114G0883 Durio zibethinus HOM05D006168 ORTHO05D007602 8.1e-47 190.7 146 69.9
Atru.chr9.17 Acer truncatum HOM05D006168 ORTHO05D007602 3.1e-46 188.7 140 71.4
Dinv03501 Davidia involucrata HOM05D006168 ORTHO05D007602 1.2e-45 186.8 150 70.7
Dinv03506 Davidia involucrata HOM05D006168 ORTHO05D007602 1.2e-45 186.8 150 70.7
Gorai.009G312100 Gossypium raimondii HOM05D006168 ORTHO05D007602 1.5e-45 186.4 139 72.7
Nn3g18550 Nelumbo nucifera HOM05D006168 ORTHO05D007602 1.5e-45 186.4 151 67.5
ECA238G2000 Erigeron canadensis HOM05D006168 ORTHO05D007602 3.4e-45 185.3 153 65.4
HanXRQChr14g0428251 Helianthus annuus HOM05D006168 ORTHO05D007602 2.9e-44 182.2 138 66.7
CDE04G1298 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 8.4e-44 180.6 151 67.5
Lsat_1_v5_gn_2_6441 Lactuca sativa HOM05D006168 ORTHO05D007602 2.4e-43 179.1 147 63.9
CsaV3_1G007610 Cucumis sativus L. HOM05D006168 ORTHO05D007602 3.2e-43 178.7 152 65.8
Cfa017805 Carpinus fangiana HOM05D006168 ORTHO05D007602 4.2e-43 178.3 132 71.2
ClCG01G014720 Citrullus lanatus HOM05D006168 ORTHO05D007602 5.4e-43 177.9 147 69.4
PGR083G1429 Punica granatum HOM05D006168 ORTHO05D007602 7.1e-43 177.6 149 66.4
TWI81G0790 Tripterygium wilfordii HOM05D006168 ORTHO05D007602 9.3e-43 177.2 150 65.3
PGSC0003DMG400027059 Solanum tuberosum HOM05D006168 ORTHO05D007602 1.6e-42 176.4 145 63.4
MELO3C002180.2 Cucumis melo HOM05D006168 ORTHO05D007602 2.1e-42 176.0 147 67.3
Cc02_g29290 Coffea canephora HOM05D006168 ORTHO05D007602 3.5e-42 175.3 171 56.1
DCAR_011406 Daucus carota HOM05D006168 ORTHO05D007602 4.6e-42 174.9 141 66.7
Solyc06g072170.2 Solanum lycopersicum HOM05D006168 ORTHO05D007602 6.0e-42 174.5 145 63.4
Sopen06g028470 Solanum pennellii HOM05D006168 ORTHO05D007602 6.0e-42 174.5 145 63.4
Aqoxy2G03978 Aquilegia oxysepala HOM05D006168 ORTHO05D007602 7.8e-42 174.1 137 65.7
Lj5g0014337 Lotus japonicus HOM05D006168 ORTHO05D007602 7.8e-42 174.1 152 64.5
Peaxi162Scf00643g00537 Petunia axillaris HOM05D006168 ORTHO05D007602 7.8e-42 174.1 139 65.5
QL10p033704 Quercus lobata HOM05D006168 ORTHO05D007602 1.0e-41 173.7 137 68.6
EL10Ac8g18962 Beta vulgaris HOM05D006168 ORTHO05D007602 1.3e-41 173.3 146 63.0
CDE08G0644 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 3.0e-41 172.2 153 64.1
Hund08905 Selenicereus undatus HOM05D006168 ORTHO05D007602 5.1e-41 171.4 154 62.3
RcHm_v2.0_Chr7g0176961 Rosa chinensis HOM05D006168 ORTHO05D007602 6.6e-41 171.0 151 64.2
AUR62028326 Chenopodium quinoa HOM05D006168 ORTHO05D007602 8.7e-41 170.6 145 63.4
FAN04G0186 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.5e-40 169.9 157 61.8
FvH4_5g18550 Fragaria vesca HOM05D006168 ORTHO05D007602 1.9e-40 169.5 158 61.4
FAN18G0639 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.9e-40 169.5 158 61.4
Sed0019180 Sechium edule HOM05D006168 ORTHO05D007602 1.9e-40 169.5 147 65.3
Ah.14g084700 Amaranthus hybridus HOM05D006168 ORTHO05D007602 3.3e-40 168.7 154 63.6
FAN08G3581 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.3e-40 168.3 157 61.1
BraA03t12572Z Brassica rapa HOM05D006168 ORTHO05D007602 9.6e-40 167.2 134 69.4
ECA238G0114 Erigeron canadensis HOM05D006168 ORTHO05D007602 2.8e-39 165.6 138 64.5
ECA238G1897 Erigeron canadensis HOM05D006168 ORTHO05D007602 2.8e-39 165.6 138 64.5
VMungo0720G1915 Vigna mungo HOM05D006168 ORTHO05D007602 2.8e-39 165.6 143 65.0
AUR62025335 Chenopodium quinoa HOM05D006168 ORTHO05D007602 3.6e-39 165.2 132 66.7
BolC3t16418H Brassica oleracea HOM05D006168 ORTHO05D007602 6.2e-39 164.5 132 68.9
ECA238G2968 Erigeron canadensis HOM05D000092 ORTHO05D000042 6.2e-39 164.5 137 62.0
PSO063G5228 Papaver somniferum HOM05D006168 ORTHO05D007602 6.2e-39 164.5 142 61.3
ATR0124G011 Amborella trichopoda HOM05D006168 ORTHO05D007602 8.1e-39 164.1 141 64.5
MD06G1240400 Malus domestica HOM05D006168 ORTHO05D007602 1.1e-38 163.7 146 63.0
Glyma.20G216400 Glycine max HOM05D006168 ORTHO05D007602 1.8e-38 162.9 147 66.0
Phvul.L006301 Phaseolus vulgaris HOM05D006168 ORTHO05D007602 2.4e-38 162.5 142 64.8
TAR629G1867 Trochodendron aralioides HOM05D006168 ORTHO05D007602 3.1e-38 162.2 142 63.4
Glyma.10G174000 Glycine max HOM05D006168 ORTHO05D007602 6.9e-38 161.0 144 65.3
CSS0046866 Camellia sinensis var. sinensis HOM05D006168 ORTHO05D007602 1.2e-37 160.2 96 83.3
CARHR079400 Cardamine hirsuta HOM05D006168 ORTHO05D007602 1.2e-37 160.2 139 63.3
MSTRG.4316 Avicennia marina HOM05D006168 ORTHO05D007602 1.5e-37 159.8 144 61.1
Rhsim12G0137000 Rhododendron simsii HOM05D006168 ORTHO05D007602 1.5e-37 159.8 129 65.1
Aa31LG5G15370 Aethionema arabicum HOM05D006168 ORTHO05D007602 4.5e-37 158.3 135 63.0
MD14G1246600 Malus domestica HOM05D006168 ORTHO05D007602 4.5e-37 158.3 146 61.6
Migut.D02066 Erythranthe guttata HOM05D006168 ORTHO05D007602 5.8e-37 157.9 162 53.7
Medtr1g077570 Medicago truncatula HOM05D006168 ORTHO05D007602 9.9e-37 157.1 166 57.8
Ca_09928_v3 Cicer arietinum L. HOM05D006168 ORTHO05D007602 1.7e-36 156.4 162 59.3
Lalb_Chr21g0311691 Lupinus albus HOM05D006168 ORTHO05D007602 2.2e-36 156.0 141 62.4
MBI06_g12548_MAGBIO Magnolia biondii HOM05D006168 ORTHO05D007602 3.8e-36 155.2 148 58.1
Sp3g03900 Schrenkiella parvula HOM05D006168 ORTHO05D007602 4.9e-36 154.8 143 60.1
unitig_21.g20432 Utricularia gibba HOM05D006168 ORTHO05D007602 4.9e-36 154.8 159 54.7
Ciclev10022597m.g Citrus clementina HOM05D006168 ORTHO05D007602 8.4e-36 154.1 156 57.7
vmacro16399 Vaccinium macrocarpon HOM05D006168 ORTHO05D007602 3.2e-35 152.1 163 54.0
Thhalv10021722m.g Eutrema salsugineum HOM05D006168 ORTHO05D007602 4.2e-35 151.8 132 63.6
Psat6g054520 Pisum sativum HOM05D006168 ORTHO05D007602 4.2e-35 151.8 160 55.6
SGA_v2.0_scaffold387G50509 Striga asiatica HOM05D006168 ORTHO05D007602 2.7e-34 149.1 165 53.9
THA.LOC104818656 Tarenaya hassleriana HOM05D006168 ORTHO05D007602 2.7e-34 149.1 137 59.1
AL3G15460 Arabidopsis lyrata HOM05D006168 ORTHO05D007602 7.9e-34 147.5 138 58.0
CAN.G65.65 Capsicum annuum HOM05D006168 ORTHO05D007602 1.8e-33 146.4 95 73.7
Carub.0003s0432 Capsella rubella HOM05D006168 ORTHO05D007602 6.7e-33 144.4 139 57.6
Eucgr.H00657 Eucalyptus grandis HOM05D006168 ORTHO05D007602 8.7e-33 144.1 103 71.8
AT3G05070 Arabidopsis thaliana HOM05D006168 ORTHO05D007602 1.5e-32 143.3 138 56.5
C05p62160 Brassica napus HOM05D006168 ORTHO05D007602 1.5e-32 143.3 141 58.2
BolC5t34874H Brassica oleracea HOM05D006168 ORTHO05D007602 1.5e-32 143.3 141 58.2
HPP92_020852 Vanilla planifolia HOM05D006168 ORTHO05D007602 1.9e-32 142.9 144 59.7
A05p42500 Brassica napus HOM05D006168 ORTHO05D007602 5.6e-32 141.4 141 57.4
BraA05t23002Z Brassica rapa HOM05D006168 ORTHO05D007602 5.6e-32 141.4 141 57.4
Haze_18408 Corylus avellana HOM05D006168 ORTHO05D007602 5.6e-32 141.4 89 79.8
SalBow8G4549 Salvia bowleyana HOM05D006168 ORTHO05D007602 6.9e-30 134.4 144 56.9
SEGI_05677 Sequoiadendron giganteum HOM05D006168 ORTHO05D007602 1.5e-29 133.3 153 49.7
RcHm_v2.0_Chr5g0006211 Rosa chinensis HOM05D006168 ORTHO05D007602 1.3e-28 130.2 151 49.7
arahy.Tifrunner.gnm1.ann1.52MA05 Arachis hypogaea HOM05D006168 ORTHO05D007602 6.4e-28 127.9 145 51.7
Oeu034422.1 Olea europaea HOM05D006168 ORTHO05D007602 6.4e-28 127.9 136 54.4
BcaC05g29992 Brassica carinata HOM05D006168 ORTHO05D007602 1.8e-25 119.8 134 53.0
AagrBONN_evm.TU.Sc2ySwM_368.389 Anthoceros agrestis HOM05D006168 ORTHO05D007602 6.7e-25 117.9 134 52.2
Pp3c19_22150 Physcomitrium patens HOM05D006168 ORTHO05D007602 1.1e-24 117.1 144 49.3
Nitab4.5_0000477g0160 Nicotiana tabacum HOM05D006168 ORTHO05D007602 1.9e-24 116.3 86 69.8
Os06g0730800 Oryza sativa ssp. japonica HOM05D006168 ORTHO05D007602 2.5e-24 115.9 118 53.4
Nitab4.5_0002771g0020 Nicotiana tabacum HOM05D006168 ORTHO05D007602 2.1e-23 112.8 84 69.0
BcaB04g19282 Brassica carinata HOM05D006168 ORTHO05D007602 1.8e-22 109.8 82 73.2
Sed0015845 Sechium edule HOM05D006168 ORTHO05D007602 3.1e-22 109.0 128 53.1
Mapoly0133s0024 Marchantia polymorpha HOM05D006168 ORTHO05D007602 5.3e-22 108.2 122 50.0
FAN25G2877 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.0e-21 106.3 137 46.0
Zm00001eb228960 Zea mays HOM05D006168 ORTHO05D007602 2.0e-21 106.3 172 39.5
FvH4_3g03920 Fragaria vesca HOM05D006168 ORTHO05D007602 4.5e-21 105.1 137 46.0
FAN11G1802 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.5e-21 105.1 137 46.0
FAN16G2203 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.0e-20 104.0 142 45.1
SMO147G0110 Selaginella moellendorffii HOM05D006168 ORTHO05D007602 1.0e-20 104.0 137 47.4
FAN21G2556 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.9e-20 102.4 137 46.0
Potri.017G154100 Populus trichocarpa HOM05D006168 ORTHO05D007602 8.4e-20 100.9 96 57.3
arahy.Tifrunner.gnm1.ann1.S1M3RU Arachis hypogaea HOM05D006168 ORTHO05D007602 2.1e-18 96.3 120 45.8
BcaC01g04336 Brassica carinata HOM05D006168 ORTHO05D007602 1.8e-17 93.2 97 55.7
FAN13G0455 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.3e-17 92.8 101 54.5
CBR_g57849 Chara braunii HOM05D006168 ORTHO05D007602 5.1e-17 91.7 99 49.5
Sc15g0000010 Simmondsia chinensis HOM05D006168 ORTHO05D007602 3.7e-15 85.5 97 51.5
TPR.G8871 Trifolium pratense HOM05D006168 ORTHO05D007602 6.3e-15 84.7 49 85.7
Cre12.g518300 Chlamydomonas reinhardtii HOM05D006168 ORTHO05D007602 8.2e-15 84.3 125 44.0
TPR.G35595 Trifolium pratense HOM05D006168 ORTHO05D007602 2.4e-14 82.8 101 49.5
MCO12G027 Micromonas commoda HOM05D006168 ORTHO05D007602 1.0e-09 67.4 130 38.5
A03p33970 Brassica napus HOM05D006168 ORTHO05D007602 6.9e-06 54.7 62 51.6
PRCOL_00005394 Prasinoderma coloniale HOM05D006168 ORTHO05D007602 6.9e-06 54.7 98 35.7


User provided reference genes

Program Settings