Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G1260 Cannabis sativa HOM05D004997 ORTHO05D005921 3.1e-61 238.4 134 100.0
CSS0020008 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 4.4e-55 218.0 129 92.2
Dinv32261 Davidia involucrata HOM05D004997 ORTHO05D005921 4.4e-55 218.0 129 91.5
TWI38G1166 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 4.4e-55 218.0 127 92.9
Potri.004G131900 Populus trichocarpa HOM05D004997 ORTHO05D005921 5.7e-55 217.6 129 92.2
Gohir.D05G151300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 7.5e-55 217.2 131 90.8
Gorai.009G155300 Gossypium raimondii HOM05D004997 ORTHO05D005921 7.5e-55 217.2 131 90.8
SGA_v2.0_scaffold1G00167 Striga asiatica HOM05D004997 ORTHO05D005921 9.8e-55 216.9 127 92.1
Migut.M00914 Erythranthe guttata HOM05D004997 ORTHO05D005921 1.3e-54 216.5 127 92.1
Eucgr.E02397 Eucalyptus grandis HOM05D004997 ORTHO05D005921 1.7e-54 216.1 130 90.0
TWI38G0351 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 2.2e-54 215.7 129 90.7
ECA233G0220 Erigeron canadensis HOM05D004997 ORTHO05D005921 2.8e-54 215.3 129 90.7
Gohir.A05G148700 Gossypium hirsutum HOM05D004997 ORTHO05D005921 3.7e-54 214.9 131 90.8
Gohir.A10G040300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 3.7e-54 214.9 131 89.3
Cfa000953 Carpinus fangiana HOM05D004997 ORTHO05D005921 4.8e-54 214.5 130 90.0
Actinidia07691 Actinidia chinensis HOM05D004997 ORTHO05D005921 6.3e-54 214.2 129 90.7
Thecc.06G151500 Theobroma cacao HOM05D004997 ORTHO05D005921 6.3e-54 214.2 131 90.1
TAR626G0896 Trochodendron aralioides HOM05D004997 ORTHO05D005921 6.3e-54 214.2 129 89.1
FAN11G3072 Fragaria x ananassa HOM05D004997 ORTHO05D005921 8.3e-54 213.8 132 89.4
Lj5g0010316 Lotus japonicus HOM05D004997 ORTHO05D005921 8.3e-54 213.8 129 89.1
Solyc08g016420.3 Solanum lycopersicum HOM05D004997 ORTHO05D005921 8.3e-54 213.8 130 87.7
Duzib192G0549 Durio zibethinus HOM05D004997 ORTHO05D005921 1.1e-53 213.4 133 90.2
Lj4g0009583 Lotus japonicus HOM05D004997 ORTHO05D005921 1.8e-53 212.6 129 88.4
Medtr5g055650 Medicago truncatula HOM05D004997 ORTHO05D005921 1.8e-53 212.6 129 88.4
Aqoxy3G00593 Aquilegia oxysepala HOM05D004997 ORTHO05D005921 2.4e-53 212.2 132 87.1
MSTRG.16239 Avicennia marina HOM05D004997 ORTHO05D005921 2.4e-53 212.2 127 89.8
FvH4_3g05660 Fragaria vesca HOM05D004997 ORTHO05D005921 2.4e-53 212.2 132 88.6
Gorai.011G043400 Gossypium raimondii HOM05D004997 ORTHO05D005921 2.4e-53 212.2 131 88.5
Nn4g24866 Nelumbo nucifera HOM05D004997 ORTHO05D005921 2.4e-53 212.2 130 87.7
Sopen08g006800 Solanum pennellii HOM05D004997 ORTHO05D005921 3.1e-53 211.8 130 86.9
MSTRG.7483 Avicennia marina HOM05D004997 ORTHO05D005921 5.4e-53 211.1 127 90.6
MD05G1284500 Malus domestica HOM05D004997 ORTHO05D005921 5.4e-53 211.1 132 88.6
PSO339G4484 Papaver somniferum HOM05D004997 ORTHO05D005921 5.4e-53 211.1 130 87.7
Psat2g084800 Pisum sativum HOM05D004997 ORTHO05D005921 5.4e-53 211.1 129 88.4
Ciclev10017164m.g Citrus clementina HOM05D004997 ORTHO05D005921 7.0e-53 210.7 129 89.9
HanXRQChr01g0020611 Helianthus annuus HOM05D004997 ORTHO05D005921 7.0e-53 210.7 134 91.8
RcHm_v2.0_Chr5g0013981 Rosa chinensis HOM05D004997 ORTHO05D005921 7.0e-53 210.7 129 89.9
HanXRQChr11g0340951 Helianthus annuus HOM05D004997 ORTHO05D005921 9.1e-53 210.3 127 89.8
Sed0005528 Sechium edule HOM05D004997 ORTHO05D005921 9.1e-53 210.3 130 89.2
FAN21G2809 Fragaria x ananassa HOM05D004997 ORTHO05D005921 1.2e-52 209.9 130 89.2
MD10G1262900 Malus domestica HOM05D004997 ORTHO05D005921 1.2e-52 209.9 130 88.5
Lalb_Chr05g0222161 Lupinus albus HOM05D004997 ORTHO05D005921 1.6e-52 209.5 127 88.2
PSO384G3576 Papaver somniferum HOM05D004997 ORTHO05D005921 1.6e-52 209.5 130 86.9
Carub.0001s2824 Capsella rubella HOM05D004997 ORTHO05D005921 2.0e-52 209.1 130 85.4
MELO3C002717.2 Cucumis melo HOM05D004997 ORTHO05D005921 2.0e-52 209.1 130 87.7
unitig_32.g11442 Utricularia gibba HOM05D004997 ORTHO05D005921 2.0e-52 209.1 126 88.9
CiPaw.10G092400 Carya illinoinensis HOM05D004997 ORTHO05D005921 2.7e-52 208.8 130 86.2
Prupe.4G079900 Prunus persica HOM05D004997 ORTHO05D005921 2.7e-52 208.8 130 88.5
Sed0006544 Sechium edule HOM05D004997 ORTHO05D005921 2.7e-52 208.8 130 87.7
SGA_v2.0_scaffold333G48998 Striga asiatica HOM05D004997 ORTHO05D005921 2.7e-52 208.8 140 84.3
VMungo0251G3606 Vigna mungo HOM05D004997 ORTHO05D005921 2.7e-52 208.8 129 87.6
CARHR029400 Cardamine hirsuta HOM05D004997 ORTHO05D005921 3.5e-52 208.4 130 86.2
Gorai.002G185400 Gossypium raimondii HOM05D004997 ORTHO05D005921 4.5e-52 208.0 132 87.9
Phvul.002G321900 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 4.5e-52 208.0 129 86.0
AL1G43880 Arabidopsis lyrata HOM05D004997 ORTHO05D005921 5.9e-52 207.6 130 84.6
THA.LOC104814295 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 5.9e-52 207.6 130 85.4
Glyma.12G006600 Glycine max HOM05D004997 ORTHO05D005921 7.7e-52 207.2 132 84.8
CiPaw.09G124400 Carya illinoinensis HOM05D004997 ORTHO05D005921 1.0e-51 206.8 130 85.4
Glyma.08G046600 Glycine max HOM05D004997 ORTHO05D005921 1.0e-51 206.8 134 83.6
Gohir.D10G041200 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.3e-51 206.5 131 87.0
GSVIVG01021444001 Vitis vinifera HOM05D004997 ORTHO05D005921 1.3e-51 206.5 125 88.8
AT1G29990 Arabidopsis thaliana HOM05D004997 ORTHO05D005921 1.7e-51 206.1 129 84.5
THA.LOC104812669 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 2.2e-51 205.7 130 84.6
arahy.Tifrunner.gnm1.ann1.06CE9J Arachis hypogaea HOM05D004997 ORTHO05D005921 5.0e-51 204.5 139 82.7
Sp1g25870 Schrenkiella parvula HOM05D004997 ORTHO05D005921 2.5e-50 202.2 130 83.1
BcaC06g35482 Brassica carinata HOM05D004997 ORTHO05D005921 2.1e-49 199.1 131 80.9
BolC7t42045H Brassica oleracea HOM05D004997 ORTHO05D005921 2.1e-49 199.1 131 80.9
BcaB07g32600 Brassica carinata HOM05D004997 ORTHO05D005921 1.4e-48 196.4 130 80.0
A09p36530 Brassica napus HOM05D004997 ORTHO05D005921 1.4e-48 196.4 130 80.0
BraA09t39174Z Brassica rapa HOM05D004997 ORTHO05D005921 1.4e-48 196.4 130 80.0
Thhalv10009093m.g Eutrema salsugineum HOM05D004997 ORTHO05D005921 1.8e-48 196.1 130 81.5
C05p28750 Brassica napus HOM05D004997 ORTHO05D005921 5.2e-48 194.5 130 79.2
BolC5t31593H Brassica oleracea HOM05D004997 ORTHO05D005921 5.2e-48 194.5 130 79.2
FAN25G0101 Fragaria x ananassa HOM05D004997 ORTHO05D005921 8.8e-48 193.7 144 77.1
HPP92_006252 Vanilla planifolia HOM05D004997 ORTHO05D005921 1.2e-47 193.4 130 77.7
CDE02G0055 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 2.0e-47 192.6 127 80.3
CDE09G0791 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 3.4e-47 191.8 127 80.3
PGR042G1500 Punica granatum HOM05D004997 ORTHO05D005921 4.4e-47 191.4 130 80.8
TPR.G13287 Trifolium pratense HOM05D004997 ORTHO05D005921 9.8e-47 190.3 111 90.1
Gohir.D01G100600 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.3e-46 189.9 123 86.2
Manes.11G058500 Manihot esculenta HOM05D004997 ORTHO05D005921 1.3e-46 189.9 112 88.4
Os02g0246300 Oryza sativa ssp. japonica HOM05D004997 ORTHO05D005921 2.2e-46 189.1 127 79.5
BcaB03g13847 Brassica carinata HOM05D004997 ORTHO05D005921 3.7e-46 188.3 131 78.6
Atru.chr10.1243 Acer truncatum HOM05D004997 ORTHO05D005921 4.9e-46 188.0 120 85.8
ClCG03G007080 Citrullus lanatus HOM05D004997 ORTHO05D005921 4.9e-46 188.0 185 62.7
Gorai.002G125400 Gossypium raimondii HOM05D004997 ORTHO05D005921 1.1e-45 186.8 123 84.6
Lsat_1_v5_gn_1_91801 Lactuca sativa HOM05D004997 ORTHO05D005921 1.8e-45 186.0 106 94.3
Duzib235G0692 Durio zibethinus HOM05D004997 ORTHO05D005921 4.1e-45 184.9 112 89.3
SEGI_33388 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 4.1e-45 184.9 129 76.0
A07p10100 Brassica napus HOM05D004997 ORTHO05D005921 9.1e-45 183.7 135 77.0
CAN.G134.135 Capsicum annuum HOM05D004997 ORTHO05D000105 1.6e-44 183.0 110 88.2
MBI07_g26358_MAGBIO Magnolia biondii HOM05D004997 ORTHO05D005921 3.5e-44 181.8 108 88.0
Ah.09g232610 Amaranthus hybridus HOM05D000413 ORTHO05D000292 1.7e-43 179.5 110 84.5
Rhsim13G0211800 Rhododendron simsii HOM05D004997 ORTHO05D005921 1.7e-43 179.5 104 93.3
Hund21531 Selenicereus undatus HOM05D004997 ORTHO05D005921 2.3e-43 179.1 107 86.9
CSS0046404 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 2.9e-43 178.7 105 91.4
CsaV3_1G032650 Cucumis sativus L. HOM05D004997 ORTHO05D005921 2.9e-43 178.7 112 84.8
CAN.G134.136 Capsicum annuum HOM05D004997 ORTHO05D005921 3.8e-43 178.3 110 86.4
arahy.Tifrunner.gnm1.ann1.FF119L Arachis hypogaea HOM05D004997 ORTHO05D005921 8.6e-43 177.2 120 81.7
Prupe.3G104900 Prunus persica HOM05D004997 ORTHO05D005921 1.9e-42 176.0 105 90.5
DCAR_027919 Daucus carota HOM05D000413 ORTHO05D000292 4.2e-42 174.9 122 81.1
QL05p058391 Quercus lobata HOM05D004997 ORTHO05D005921 2.1e-41 172.6 128 76.6
FAN16G0953 Fragaria x ananassa HOM05D004997 ORTHO05D005921 8.0e-41 170.6 105 86.7
ATR0743G157 Amborella trichopoda HOM05D004997 ORTHO05D005921 3.0e-40 168.7 122 76.2
BcaC05g27010 Brassica carinata HOM05D004997 ORTHO05D005921 3.0e-40 168.7 112 78.6
Cc02_g37190 Coffea canephora HOM05D004997 ORTHO05D005921 2.0e-39 166.0 104 83.7
BraA07t28803Z Brassica rapa HOM05D004997 ORTHO05D005921 3.4e-39 165.2 120 75.0
EL10Ac8g19712 Beta vulgaris HOM05D004997 ORTHO05D005921 5.7e-39 164.5 164 60.4
Pp3c22_1770 Physcomitrium patens HOM05D004997 ORTHO05D005921 1.3e-38 163.3 125 66.4
Zm00001eb238610 Zea mays HOM05D004997 ORTHO05D005921 3.7e-38 161.8 130 73.1
Mapoly0006s0079 Marchantia polymorpha HOM05D004997 ORTHO05D005921 1.1e-37 160.2 126 67.5
PGSC0003DMG400009647 Solanum tuberosum HOM05D004997 ORTHO05D005921 3.2e-37 158.7 91 91.2
Oeu034156.1 Olea europaea HOM05D004997 ORTHO05D005921 5.4e-37 157.9 90 92.2
arahy.Tifrunner.gnm1.ann1.7IX92P Arachis hypogaea HOM05D004997 ORTHO05D005921 9.2e-37 157.1 92 90.2
vmacro04021 Vaccinium macrocarpon HOM05D004997 ORTHO05D005921 9.2e-37 157.1 87 93.1
Aa31LG6G5670 Aethionema arabicum HOM05D004997 ORTHO05D005921 2.0e-36 156.0 132 67.4
AagrBONN_evm.TU.Sc2ySwM_344.2433 Anthoceros agrestis HOM05D004997 ORTHO05D005921 2.0e-36 156.0 128 63.3
COL.COLO4_31081 Corchorus olitorius HOM05D004997 ORTHO05D005921 2.7e-36 155.6 87 93.1
Oeu052376.1 Olea europaea HOM05D004997 ORTHO05D005921 2.7e-36 155.6 90 90.0
C07p15580 Brassica napus HOM05D004997 ORTHO05D005921 4.6e-36 154.8 120 71.7
Sc17g0004940 Simmondsia chinensis HOM05D004997 ORTHO05D005921 7.8e-36 154.1 90 88.9
SMO367G0874 Selaginella moellendorffii HOM05D004997 ORTHO05D005921 1.3e-35 153.3 110 70.9
Dinv30737 Davidia involucrata HOM05D004997 ORTHO05D005921 2.3e-35 152.5 90 91.1
AUR62039776 Chenopodium quinoa HOM05D004997 ORTHO05D005921 3.3e-34 148.7 84 89.3
CAN.G3523.1 Capsicum annuum HOM05D004997 ORTHO05D005921 5.6e-34 147.9 91 85.7
Peaxi162Scf01211g00142 Petunia axillaris HOM05D004997 ORTHO05D005921 5.6e-34 147.9 88 90.9
CAN.G134.137 Capsicum annuum HOM05D004997 ORTHO05D005921 1.2e-33 146.7 94 83.0
Phvul.009G128800 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 2.1e-33 146.0 87 90.8
QL06p022817 Quercus lobata HOM05D004997 ORTHO05D005921 2.8e-33 145.6 116 71.6
Gohir.D01G149300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 8.9e-32 140.6 95 84.2
Actinidia39569 Actinidia chinensis HOM05D004997 ORTHO05D005921 3.4e-31 138.7 129 66.7
SalBow8G3614 Salvia bowleyana HOM05D004997 ORTHO05D005921 9.8e-31 137.1 102 75.5
SEGI_19850 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 6.4e-30 134.4 93 75.3
Lsat_1_v5_gn_5_30841 Lactuca sativa HOM05D004997 ORTHO05D005921 1.7e-27 126.3 71 91.5
Nitab4.5_0000348g0240 Nicotiana tabacum HOM05D004997 ORTHO05D005921 2.5e-26 122.5 65 96.9
Nitab4.5_0010327g0020 Nicotiana tabacum HOM05D004997 ORTHO05D005921 7.3e-26 120.9 91 74.7
CDE02G2003 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 8.1e-25 117.5 88 73.9
Haze_05586 Corylus avellana HOM05D004997 ORTHO05D005921 2.3e-24 115.9 80 80.0
Sabra04G0085700 Salix brachista HOM05D004997 ORTHO05D005921 3.4e-23 112.1 63 90.5
AUR62030207 Chenopodium quinoa HOM05D004997 ORTHO05D005921 2.9e-22 109.0 61 91.8
PRCOL_00000028 Prasinoderma coloniale HOM05D004997 ORTHO05D005921 7.1e-21 104.4 125 46.4
Manes.09G021201 Manihot esculenta HOM05D004997 ORTHO05D005921 1.3e-19 100.1 110 57.3
Zm00001eb258640 Zea mays HOM05D004997 ORTHO05D005921 1.3e-19 100.1 67 76.1
MCO01G210 Micromonas commoda HOM05D004997 ORTHO05D005921 1.7e-19 99.8 121 43.8
Zm00001eb151600 Zea mays HOM05D000394 ORTHO05D016690 3.9e-19 98.6 64 78.1
Zm00001eb310800 Zea mays HOM05D000394 ORTHO05D016690 1.1e-18 97.1 64 76.6
Zm00001eb139040 Zea mays HOM05D000901 ORTHO05D005921 2.5e-18 95.9 78 65.4
Zm00001eb225310 Zea mays HOM05D000901 ORTHO05D005921 5.6e-18 94.7 66 74.2
Zm00001eb269380 Zea mays HOM05D000901 ORTHO05D005921 1.2e-17 93.6 65 75.4
Zm00001eb344510 Zea mays HOM05D000901 ORTHO05D000768 1.1e-16 90.5 68 69.1
Cre12.g502750 Chlamydomonas reinhardtii HOM05D004997 ORTHO05D005921 1.7e-14 83.2 114 40.4
Haze_05599 Corylus avellana HOM05D004997 ORTHO05D005921 3.7e-14 82.0 51 84.3
Cfa022129 Carpinus fangiana HOM05D004997 ORTHO05D005921 1.9e-10 69.7 123 34.1
CBR_g48714 Chara braunii HOM05D004997 ORTHO05D005921 1.8e-08 63.2 124 36.3
arahy.Tifrunner.gnm1.ann1.MPJ1GQ Arachis hypogaea HOM05D004997 ORTHO05D005921 6.8e-08 61.2 51 66.7


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