Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G1182 Cannabis sativa HOM05D006520 ORTHO05D008405 4.7e-189 664.5 355 100.0
Prupe.4G205700 Prunus persica HOM05D006520 ORTHO05D008405 6.6e-151 537.7 361 80.1
MD03G1209400 Malus domestica HOM05D006520 ORTHO05D008405 1.1e-150 537.0 358 80.4
QL08p012619 Quercus lobata HOM05D006520 ORTHO05D008405 1.9e-150 536.2 360 81.1
RcHm_v2.0_Chr5g0037851 Rosa chinensis HOM05D006520 ORTHO05D008405 2.1e-149 532.7 361 79.5
Dinv22290 Davidia involucrata HOM05D006520 ORTHO05D008405 2.4e-148 529.3 356 78.9
FAN16G1768 Fragaria x ananassa HOM05D006520 ORTHO05D008405 6.8e-148 527.7 361 78.9
Nitab4.5_0000653g0110 Nicotiana tabacum HOM05D006520 ORTHO05D008405 3.4e-147 525.4 356 77.0
Duzib213G0852 Durio zibethinus HOM05D006520 ORTHO05D008405 4.4e-147 525.0 354 78.5
FvH4_3g22000 Fragaria vesca HOM05D006520 ORTHO05D008405 4.4e-147 525.0 361 78.7
Solyc12g005200.3 Solanum lycopersicum HOM05D006520 ORTHO05D008405 4.4e-147 525.0 354 77.7
Cc05_g13380 Coffea canephora HOM05D006520 ORTHO05D008405 1.3e-146 523.5 356 76.7
PGR083G2407 Punica granatum HOM05D006520 ORTHO05D008405 1.3e-146 523.5 359 77.7
Nitab4.5_0004600g0010 Nicotiana tabacum HOM05D006520 ORTHO05D008405 2.2e-146 522.7 356 76.7
TWI38G0825 Tripterygium wilfordii HOM05D006520 ORTHO05D008405 2.2e-146 522.7 357 77.6
CSS0025953 Camellia sinensis var. sinensis HOM05D006520 ORTHO05D008405 2.9e-146 522.3 350 77.7
CiPaw.11G185500 Carya illinoinensis HOM05D006520 ORTHO05D008405 3.8e-146 521.9 361 77.3
FAN21G1190 Fragaria x ananassa HOM05D006520 ORTHO05D008405 4.9e-146 521.5 361 78.4
Sopen12g001190 Solanum pennellii HOM05D006520 ORTHO05D008405 6.4e-146 521.2 345 78.8
Lj8A167T45 Lonicera japonica HOM05D006520 ORTHO05D008405 1.9e-145 519.6 355 76.3
PGSC0003DMG400001100 Solanum tuberosum HOM05D006520 ORTHO05D008405 1.9e-145 519.6 354 77.1
Eucgr.F00972 Eucalyptus grandis HOM05D006520 ORTHO05D008405 4.2e-145 518.5 361 78.1
Thecc.07G046500 Theobroma cacao HOM05D006520 ORTHO05D008405 7.1e-145 517.7 361 76.5
TAR362G1255 Trochodendron aralioides HOM05D006520 ORTHO05D008405 9.2e-145 517.3 365 75.6
Cpa.g.sc1133.1 Carica papaya HOM05D006520 ORTHO05D008405 2.1e-144 516.2 361 77.0
Oeu021407.1 Olea europaea HOM05D006520 ORTHO05D008405 2.1e-144 516.2 356 77.0
COL.COLO4_09604 Corchorus olitorius HOM05D006520 ORTHO05D008405 2.7e-144 515.8 362 76.0
Nn3g21422 Nelumbo nucifera HOM05D006520 ORTHO05D008405 1.0e-143 513.8 362 76.0
Cfa020400 Carpinus fangiana HOM05D006520 ORTHO05D008405 1.3e-143 513.5 355 77.7
Aqoxy5G00708 Aquilegia oxysepala HOM05D006520 ORTHO05D008405 6.6e-143 511.1 360 74.4
Ciclev10008777m.g Citrus clementina HOM05D006520 ORTHO05D008405 1.1e-142 510.4 355 76.3
Carub.0001s3988 Capsella rubella HOM05D006520 ORTHO05D008405 3.3e-142 508.8 340 78.5
vmacro11755 Vaccinium macrocarpon HOM05D006520 ORTHO05D008405 3.3e-142 508.8 355 76.1
Peaxi162Scf01097g00110 Petunia axillaris HOM05D006520 ORTHO05D008405 4.3e-142 508.4 345 77.4
Gohir.A01G076200 Gossypium hirsutum HOM05D006520 ORTHO05D008405 7.3e-142 507.7 355 76.9
Gorai.002G084200 Gossypium raimondii HOM05D006520 ORTHO05D008405 7.3e-142 507.7 355 76.9
DCAR_010030 Daucus carota HOM05D006520 ORTHO05D008405 9.6e-142 507.3 355 74.1
AL1G58660 Arabidopsis lyrata HOM05D006520 ORTHO05D008405 1.6e-141 506.5 340 78.5
Potri.011G135600 Populus trichocarpa HOM05D006520 ORTHO05D008405 1.6e-141 506.5 354 76.6
GSVIVG01001984001 Vitis vinifera HOM05D006520 ORTHO05D008405 1.6e-141 506.5 340 78.8
CAN.G315.8 Capsicum annuum HOM05D006520 ORTHO05D008405 2.1e-141 506.1 346 77.2
Haze_09634 Corylus avellana HOM05D006520 ORTHO05D008405 4.7e-141 505.0 369 74.8
Aa31LG10G3340 Aethionema arabicum HOM05D006520 ORTHO05D008405 6.2e-141 504.6 333 78.4
Atru.chr2.3238 Acer truncatum HOM05D006520 ORTHO05D008405 3.1e-140 502.3 355 74.1
AT1G50940 Arabidopsis thaliana HOM05D006520 ORTHO05D008405 9.0e-140 500.7 343 77.3
Hund18268 Selenicereus undatus HOM05D006520 ORTHO05D008405 1.2e-139 500.4 346 76.0
HanXRQChr08g0234071 Helianthus annuus HOM05D006520 ORTHO05D008405 2.0e-139 499.6 342 76.6
THA.LOC104817880 Tarenaya hassleriana HOM05D006520 ORTHO05D008405 2.6e-139 499.2 362 72.9
Thhalv10011599m.g Eutrema salsugineum HOM05D006520 ORTHO05D008405 7.6e-139 497.7 362 74.0
Migut.M01795 Erythranthe guttata HOM05D006520 ORTHO05D008405 1.7e-138 496.5 356 74.7
ECA246G0715 Erigeron canadensis HOM05D006520 ORTHO05D008405 2.9e-138 495.7 355 74.9
SGA_v2.0_scaffold258G45796 Striga asiatica HOM05D006520 ORTHO05D008405 4.9e-138 495.0 348 75.0
AUR62043225 Chenopodium quinoa HOM05D006520 ORTHO05D008405 2.4e-137 492.7 355 73.8
Sc16g0006360 Simmondsia chinensis HOM05D006520 ORTHO05D008405 3.2e-137 492.3 357 75.1
Sabra11G0121700 Salix brachista HOM05D006520 ORTHO05D008405 4.2e-137 491.9 376 71.8
Sed0027741 Sechium edule HOM05D006520 ORTHO05D008405 7.1e-137 491.1 363 73.8
Sabra11G0121400 Salix brachista HOM05D006520 ORTHO05D008405 9.3e-137 490.7 376 71.8
Ah.06g182970 Amaranthus hybridus HOM05D006520 ORTHO05D008405 1.6e-136 490.0 357 73.7
PSO832G0135 Papaver somniferum HOM05D006520 ORTHO05D008405 1.6e-136 490.0 342 76.0
CARHR040980 Cardamine hirsuta HOM05D006520 ORTHO05D008405 4.6e-136 488.4 342 75.4
Glyma.06G270300 Glycine max HOM05D006520 ORTHO05D008405 4.6e-136 488.4 359 74.4
Ca_18859_v3 Cicer arietinum L. HOM05D006520 ORTHO05D008405 7.8e-136 487.6 360 73.9
PSO210G5695 Papaver somniferum HOM05D006520 ORTHO05D008405 7.8e-136 487.6 342 75.4
Lj3g0004956 Lotus japonicus HOM05D006520 ORTHO05D008405 1.0e-135 487.3 362 72.4
BcaC01g01246 Brassica carinata HOM05D006520 ORTHO05D008405 3.9e-135 485.3 333 76.3
BolC3t21294H Brassica oleracea HOM05D006520 ORTHO05D008405 3.9e-135 485.3 333 76.3
BraA08t32341Z Brassica rapa HOM05D006520 ORTHO05D008405 3.9e-135 485.3 333 76.3
CsaV3_3G023150 Cucumis sativus L. HOM05D006520 ORTHO05D008405 5.1e-135 485.0 337 76.3
BcaB04g17242 Brassica carinata HOM05D006520 ORTHO05D008405 8.7e-135 484.2 341 75.7
AUR62020529 Chenopodium quinoa HOM05D006520 ORTHO05D008405 1.1e-134 483.8 355 72.4
Lsat_1_v5_gn_7_65980 Lactuca sativa HOM05D006520 ORTHO05D008405 1.9e-134 483.0 339 75.5
MELO3C018098.2 Cucumis melo HOM05D006520 ORTHO05D008405 2.5e-134 482.6 337 75.7
A08p03100 Brassica napus HOM05D006520 ORTHO05D008405 3.3e-134 482.3 333 76.0
C03p89710 Brassica napus HOM05D006520 ORTHO05D008405 5.6e-134 481.5 362 71.5
Sp1g37680 Schrenkiella parvula HOM05D006520 ORTHO05D008405 1.6e-133 479.9 363 72.7
Lalb_Chr03g0030081 Lupinus albus HOM05D006520 ORTHO05D008405 8.1e-133 477.6 342 74.3
Medtr4g080790 Medicago truncatula HOM05D006520 ORTHO05D008405 1.4e-132 476.9 359 72.7
arahy.Tifrunner.gnm1.ann1.45MNV2 Arachis hypogaea HOM05D006520 ORTHO05D008405 1.8e-132 476.5 356 72.5
ATR0706G183 Amborella trichopoda HOM05D006520 ORTHO05D008405 6.9e-132 474.6 355 71.0
HPP92_026253 Vanilla planifolia HOM05D006520 ORTHO05D008405 9.0e-132 474.2 362 69.6
VMungo1127G1053 Vigna mungo HOM05D006520 ORTHO05D008405 6.4e-130 468.0 359 72.1
Psat7g163040 Pisum sativum HOM05D006520 ORTHO05D008405 8.4e-130 467.6 339 74.9
Phvul.011G139475 Phaseolus vulgaris HOM05D006520 ORTHO05D008405 5.4e-129 464.9 359 71.3
Os03g0835400 Oryza sativa ssp. japonica HOM05D006520 ORTHO05D008405 1.6e-128 463.4 357 70.6
ClCG05G014620 Citrullus lanatus HOM05D006520 ORTHO05D008405 5.1e-127 458.4 362 70.2
EL10Ac4g07934 Beta vulgaris HOM05D006520 ORTHO05D008405 2.5e-126 456.1 357 69.7
Actinidia09928 Actinidia chinensis HOM05D006520 ORTHO05D008405 1.2e-123 447.2 269 84.4
TPR.G25908 Trifolium pratense HOM05D006520 ORTHO05D008405 6.4e-122 441.4 298 77.5
Manes.15G075200 Manihot esculenta HOM05D006520 ORTHO05D008405 1.9e-121 439.9 269 82.9
Mapoly0055s0094 Marchantia polymorpha HOM05D006520 ORTHO05D008405 1.9e-113 413.3 340 62.6
Pp3c15_18640 Physcomitrium patens HOM05D006520 ORTHO05D008405 3.9e-111 405.6 358 58.9
SHI31861 Sapria himalayana HOM05D006520 ORTHO05D008405 1.7e-106 390.2 364 61.3
Gohir.D01G063700 Gossypium hirsutum HOM05D006520 ORTHO05D008405 6.7e-103 378.3 289 71.3
SMO169G0265 Selaginella moellendorffii HOM05D006520 ORTHO05D008405 7.4e-102 374.8 337 59.1
SalBow6G5624 Salvia bowleyana HOM05D006520 ORTHO05D008405 1.5e-89 334.0 265 69.1
CiPaw.11G185700 Carya illinoinensis HOM05D006520 ORTHO05D008405 1.0e-87 327.8 289 65.7
Zm00001eb063680 Zea mays HOM05D006520 ORTHO05D008405 5.7e-78 295.4 265 62.3
Cre16.g687950 Chlamydomonas reinhardtii HOM05D006520 ORTHO05D008405 9.1e-76 288.1 346 49.1
TAR362G0323 Trochodendron aralioides HOM05D000062 ORTHO05D000043 2.5e-73 280.0 272 58.5
Haze_27296 Corylus avellana HOM05D006520 ORTHO05D008405 8.0e-72 275.0 336 47.0
CDE01G0592 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 6.8e-71 271.9 228 67.1
PRCOL_00001901 Prasinoderma coloniale HOM05D006520 ORTHO05D008405 7.2e-65 251.9 295 49.2
CsaV3_3G025180 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.0e-63 248.1 155 83.2
Cfa027367 Carpinus fangiana HOM05D006520 ORTHO05D008405 2.2e-61 240.4 360 43.1
arahy.Tifrunner.gnm1.ann1.3QT6IB Arachis hypogaea HOM05D006520 ORTHO05D008405 5.4e-60 235.7 356 46.1
unitig_62.g23270 Utricularia gibba HOM05D006520 ORTHO05D008405 1.1e-57 228.0 193 63.7
CsaV3_UNG094710 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.8e-55 220.7 186 67.7
CsaV3_3G025190 Cucumis sativus L. HOM05D006520 ORTHO05D008405 4.0e-55 219.5 191 63.4
AagrBONN_evm.TU.Sc2ySwM_228.3593 Anthoceros agrestis HOM05D006520 ORTHO05D008405 3.3e-49 199.9 189 56.1
Glyma.12G134400 Glycine max HOM05D006520 ORTHO05D008405 2.1e-43 180.6 140 68.6
SEGI_24363 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 2.8e-40 170.2 154 57.8
Haze_27029 Corylus avellana HOM05D006520 ORTHO05D008405 4.7e-40 169.5 264 43.6
SEGI_31254 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 2.3e-39 167.2 91 93.4
CsaV3_UNG094720 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.2e-35 154.8 114 71.1
Pp3c15_18800 Physcomitrium patens HOM05D006520 ORTHO05D008405 1.4e-28 131.3 133 54.1
unitig_62.g23271 Utricularia gibba HOM05D006520 ORTHO05D008405 2.8e-24 117.1 66 87.9
CDE01G0120 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 2.2e-21 107.5 57 93.0
Actinidia27215 Actinidia chinensis HOM05D006520 ORTHO05D008405 1.6e-19 101.3 138 50.0
SEGI_23300 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 1.6e-19 101.3 88 59.1
EL10Ac4g08085 Beta vulgaris HOM05D006520 ORTHO05D090166 2.9e-13 80.5 43 93.0
MD11G1224100 Malus domestica HOM05D006520 ORTHO05D008405 8.4e-13 79.0 46 84.8


User provided reference genes

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