Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G1108 Cannabis sativa HOM05D006614 ORTHO05D008217 0.0e+00 1132.1 598 100.0
RcHm_v2.0_Chr5g0030921 Rosa chinensis HOM05D006614 ORTHO05D008217 7.3e-219 764.2 620 62.6
FAN16G2994 Fragaria x ananassa HOM05D006614 ORTHO05D008217 3.9e-212 741.9 613 61.3
FAN11G1715 Fragaria x ananassa HOM05D006614 ORTHO05D008217 2.5e-211 739.2 613 61.0
FvH4_3g18290 Fragaria vesca HOM05D006614 ORTHO05D008217 9.6e-211 737.3 615 61.0
Prupe.4G164700 Prunus persica HOM05D006614 ORTHO05D008217 2.6e-208 729.2 636 66.2
MD03G1243600 Malus domestica HOM05D006614 ORTHO05D008217 1.4e-206 723.4 626 66.6
PGR142G0467 Punica granatum HOM05D006614 ORTHO05D008217 1.0e-204 717.2 602 66.1
Thecc.07G117000 Theobroma cacao HOM05D006614 ORTHO05D008217 1.8e-201 706.4 609 65.5
COL.COLO4_17543 Corchorus olitorius HOM05D006614 ORTHO05D008217 6.9e-201 704.5 611 63.5
Duzib213G0629 Durio zibethinus HOM05D006614 ORTHO05D008217 1.5e-200 703.4 601 65.9
LjContig00141g0022614 Lotus japonicus HOM05D006614 ORTHO05D008217 1.9e-198 696.4 629 61.0
CSS0027020 Camellia sinensis var. sinensis HOM05D006614 ORTHO05D008217 3.2e-198 695.7 623 61.8
TWI38G0322 Tripterygium wilfordii HOM05D006614 ORTHO05D008217 3.2e-198 695.7 611 64.0
Glyma.14G066300 Glycine max HOM05D006614 ORTHO05D008217 7.1e-198 694.5 622 61.4
TAR375G0652 Trochodendron aralioides HOM05D006614 ORTHO05D008217 3.5e-197 692.2 647 59.2
CsaV3_4G033120 Cucumis sativus L. HOM05D006614 ORTHO05D008217 4.6e-197 691.8 612 62.4
MELO3C025640.2 Cucumis melo HOM05D006614 ORTHO05D008217 6.0e-197 691.4 615 62.9
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 7.9e-197 691.0 612 60.1
Sc16g0007600 Simmondsia chinensis HOM05D006614 ORTHO05D008217 7.9e-197 691.0 617 62.6
Migut.M00728 Erythranthe guttata HOM05D006614 ORTHO05D008217 1.3e-196 690.3 617 62.2
Sed0001562 Sechium edule HOM05D006614 ORTHO05D008217 2.3e-196 689.5 620 60.5
GSVIVG01014198001 Vitis vinifera HOM05D006614 ORTHO05D008217 3.9e-196 688.7 594 61.1
Gorai.001G269000 Gossypium raimondii HOM05D006614 ORTHO05D008217 6.7e-196 688.0 619 61.7
ClCG11G017450 Citrullus lanatus HOM05D006614 ORTHO05D008217 1.1e-195 687.2 612 62.7
Hma1.2p1_0290F.1_g114830 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 1.5e-195 686.8 607 61.1
Gohir.A07G226400 Gossypium hirsutum HOM05D006614 ORTHO05D008217 1.9e-195 686.4 620 61.0
Gohir.D07G233600 Gossypium hirsutum HOM05D006614 ORTHO05D008217 2.5e-195 686.0 622 61.3
HanXRQChr15g0476201 Helianthus annuus HOM05D006614 ORTHO05D008217 7.4e-195 684.5 610 61.8
Actinidia12578 Actinidia chinensis HOM05D006614 ORTHO05D008217 2.1e-194 682.9 598 58.7
TPR.G25839 Trifolium pratense HOM05D006614 ORTHO05D008217 2.4e-193 679.5 620 59.5
Peaxi162Scf00111g01423 Petunia axillaris HOM05D006614 ORTHO05D008217 9.0e-193 677.6 604 58.3
Phvul.008G231100 Phaseolus vulgaris HOM05D006614 ORTHO05D008217 2.6e-192 676.0 627 58.1
Manes.15G094800 Manihot esculenta HOM05D006614 ORTHO05D008217 4.5e-192 675.2 613 57.7
THA.LOC104822565 Tarenaya hassleriana HOM05D006614 ORTHO05D008217 1.0e-191 674.1 644 56.4
Nitab4.5_0006953g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 2.2e-191 672.9 605 58.0
Cpa.g.sc77.8 Carica papaya HOM05D006614 ORTHO05D008217 4.9e-191 671.8 609 60.4
Lalb_Chr17g0346371 Lupinus albus HOM05D006614 ORTHO05D008217 1.9e-190 669.8 633 57.2
Thecc.07G116400 Theobroma cacao HOM05D006614 ORTHO05D008217 7.1e-190 667.9 517 69.6
MSTRG.6677 Avicennia marina HOM05D006614 ORTHO05D008217 9.3e-190 667.5 620 59.7
Psat2g179000 Pisum sativum HOM05D006614 ORTHO05D008217 1.6e-189 666.8 633 55.5
Haze_09323 Corylus avellana HOM05D006614 ORTHO05D008217 2.1e-189 666.4 574 65.5
CiPaw.11G160300 Carya illinoinensis HOM05D006614 ORTHO05D008217 3.5e-189 665.6 632 61.4
Medtr5g080700 Medicago truncatula HOM05D006614 ORTHO05D008217 6.0e-189 664.8 626 57.7
Ca_05900_v3 Cicer arietinum L. HOM05D006614 ORTHO05D008217 7.9e-189 664.5 637 55.7
PGSC0003DMG400046940 Solanum tuberosum HOM05D006614 ORTHO05D008217 1.8e-188 663.3 611 59.1
Sopen07g030680 Solanum pennellii HOM05D006614 ORTHO05D008217 6.7e-188 661.4 611 59.1
VMungo0647G0674 Vigna mungo HOM05D006614 ORTHO05D008217 8.7e-188 661.0 612 60.9
DCAR_021025 Daucus carota HOM05D006614 ORTHO05D008217 2.5e-187 659.4 629 57.4
vmacro23466 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 3.3e-187 659.1 614 58.3
Nitab4.5_0003565g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 4.3e-187 658.7 619 56.1
arahy.Tifrunner.gnm1.ann1.UH0U35 Arachis hypogaea HOM05D006614 ORTHO05D008217 5.7e-187 658.3 640 58.1
Solyc07g062440.1 Solanum lycopersicum HOM05D006614 ORTHO05D008217 5.7e-187 658.3 609 58.9
arahy.Tifrunner.gnm1.ann1.087IU6 Arachis hypogaea HOM05D006614 ORTHO05D008217 7.4e-187 657.9 640 57.8
Rhsim06G0208100 Rhododendron simsii HOM05D006614 ORTHO05D008217 1.3e-186 657.1 616 61.5
Lj1P829T27 Lonicera japonica HOM05D006614 ORTHO05D008217 2.1e-186 656.4 594 61.1
Cfa019566 Carpinus fangiana HOM05D006614 ORTHO05D008217 6.3e-186 654.8 573 65.1
SalBow5G0223 Salvia bowleyana HOM05D006614 ORTHO05D008217 2.6e-184 649.4 578 58.1
A05p34510 Brassica napus HOM05D006614 ORTHO05D008217 3.4e-184 649.0 621 56.0
BraA05t22271Z Brassica rapa HOM05D006614 ORTHO05D008217 3.4e-184 649.0 621 56.0
PSO421G0295 Papaver somniferum HOM05D006614 ORTHO05D008217 2.9e-183 646.0 608 57.7
BcaB06g25331 Brassica carinata HOM05D006614 ORTHO05D008217 5.0e-183 645.2 630 58.3
C05p52250 Brassica napus HOM05D006614 ORTHO05D008217 5.0e-183 645.2 623 55.5
PSO063G1163 Papaver somniferum HOM05D006614 ORTHO05D008217 6.5e-183 644.8 610 58.9
Aa31LG8G2110 Aethionema arabicum HOM05D006614 ORTHO05D008217 8.4e-183 644.4 625 60.8
BolC5t33914H Brassica oleracea HOM05D006614 ORTHO05D008217 2.5e-182 642.9 629 55.2
Potri.001G390600 Populus trichocarpa HOM05D006614 ORTHO05D008217 3.2e-182 642.5 613 60.4
Cc05_g11080 Coffea canephora HOM05D006614 ORTHO05D008217 5.5e-182 641.7 614 58.0
Thhalv10022322m.g Eutrema salsugineum HOM05D006614 ORTHO05D008217 5.5e-182 641.7 624 55.4
Sp3g13110 Schrenkiella parvula HOM05D006614 ORTHO05D008217 2.1e-181 639.8 626 54.6
EL10Ac8g18445 Beta vulgaris HOM05D006614 ORTHO05D008217 3.6e-181 639.0 626 57.7
Oeu061358.1 Olea europaea HOM05D006614 ORTHO05D008217 1.0e-180 637.5 603 58.9
Ah.09g230960 Amaranthus hybridus HOM05D006614 ORTHO05D008217 1.3e-180 637.1 632 54.9
AT3G14900 Arabidopsis thaliana HOM05D006614 ORTHO05D008217 3.0e-180 636.0 631 54.5
AL3G27220 Arabidopsis lyrata HOM05D006614 ORTHO05D008217 4.3e-179 632.1 624 56.7
QL12p002313 Quercus lobata HOM05D006614 ORTHO05D008217 5.7e-179 631.7 550 63.8
Aqoxy1G00012 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 4.8e-178 628.6 543 63.7
Carub.0003s1456 Capsella rubella HOM05D006614 ORTHO05D008217 4.8e-178 628.6 626 54.5
CAN.G375.15 Capsicum annuum HOM05D006614 ORTHO05D008217 6.9e-177 624.8 603 57.9
SGA_v2.0_scaffold34G13782 Striga asiatica HOM05D006614 ORTHO05D008217 1.1e-174 617.5 614 55.9
unitig_747.g21586 Utricularia gibba HOM05D006614 ORTHO05D008217 3.2e-174 615.9 543 57.5
BcaB06g29517 Brassica carinata HOM05D006614 ORTHO05D008217 1.2e-173 614.0 622 53.5
FAN25G0567 Fragaria x ananassa HOM05D006614 ORTHO05D008217 3.6e-173 612.5 618 53.1
CDE12G0873 Ceratophyllum demersum HOM05D006614 ORTHO05D008217 1.4e-172 610.5 623 55.4
ECA240G1555 Erigeron canadensis HOM05D006614 ORTHO05D008217 1.4e-172 610.5 630 57.0
AUR62021467 Chenopodium quinoa HOM05D006614 ORTHO05D008217 6.7e-172 608.2 602 55.3
CARHR089840 Cardamine hirsuta HOM05D006614 ORTHO05D008217 2.0e-171 606.7 639 52.4
Atru.chr2.2145 Acer truncatum HOM05D006614 ORTHO05D008217 3.3e-171 605.9 616 54.7
AUR62010952 Chenopodium quinoa HOM05D006614 ORTHO05D008217 4.7e-165 585.5 602 54.5
Hma1.2p1_0290F.1_g114840 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 2.0e-160 570.1 441 66.2
MBI12_g10753_MAGBIO Magnolia biondii HOM05D006614 ORTHO05D008217 1.9e-158 563.5 476 60.5
vmacro11940 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 4.0e-156 555.8 564 53.7
ATR0810G004 Amborella trichopoda HOM05D006614 ORTHO05D008217 7.2e-150 535.0 611 50.1
HPP92_015867 Vanilla planifolia HOM05D006614 ORTHO05D008217 9.4e-150 534.6 592 49.3
Eucgr.K01881 Eucalyptus grandis HOM05D006614 ORTHO05D008217 7.7e-144 515.0 607 50.2
Psat0s3066g0080 Pisum sativum HOM05D006614 ORTHO05D008217 4.7e-141 505.8 433 59.8
Zm00001eb078480 Zea mays HOM05D006614 ORTHO05D008217 2.0e-139 500.4 558 49.5
Sabra16G0256000 Salix brachista HOM05D006614 ORTHO05D008217 7.5e-139 498.4 401 63.8
Os04g0497900 Oryza sativa ssp. japonica HOM05D006614 ORTHO05D008217 1.3e-138 497.7 541 53.0
Aqoxy3G00116 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 4.4e-123 446.0 421 62.5
Ciclev10023881m.g Citrus clementina HOM05D006614 ORTHO05D008217 1.4e-97 361.3 336 62.2
Glyma.02G250300 Glycine max HOM05D006614 ORTHO05D008217 4.6e-96 356.3 351 54.7
SEGI_22211 Sequoiadendron giganteum HOM05D006614 ORTHO05D008217 4.6e-80 303.1 519 36.8
AagrBONN_evm.TU.Sc2ySwM_228.5094 Anthoceros agrestis HOM05D006614 ORTHO05D008217 1.7e-45 188.3 454 35.2
SMO356G0760 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 1.8e-44 184.9 252 39.3
SMO356G0609 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 5.3e-44 183.3 252 39.3
Pp3c16_3160 Physcomitrium patens HOM05D006614 ORTHO05D008217 3.8e-42 177.2 566 34.3
Mapoly0097s0086 Marchantia polymorpha HOM05D006614 ORTHO05D008217 2.4e-36 157.9 242 35.1
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 3.8e-34 150.6 99 69.7
MD11G1263800 Malus domestica HOM05D006614 ORTHO05D008217 8.0e-32 142.9 91 75.8
Psat0s3066g0040 Pisum sativum HOM05D006614 ORTHO05D008217 1.9e-25 121.7 71 76.1
Dinv02793 Davidia involucrata HOM05D006614 ORTHO05D008217 1.2e-24 119.0 75 73.3
Cfa001947 Carpinus fangiana HOM05D006614 ORTHO05D008217 4.7e-24 117.1 83 68.7
FAN21G3229 Fragaria x ananassa HOM05D006614 ORTHO05D008217 2.6e-22 111.3 66 77.3
Aqoxy3G00115 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 3.4e-22 110.9 98 68.4
HPP92_015860 Vanilla planifolia HOM05D006614 ORTHO05D008217 2.9e-18 97.8 58 67.2
CBR_g47994 Chara braunii HOM05D006614 ORTHO05D008217 3.6e-16 90.9 234 27.8
HPP92_015861 Vanilla planifolia HOM05D006614 ORTHO05D008217 5.8e-06 57.0 30 83.3


User provided reference genes

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