Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G1057 Cannabis sativa HOM05D004441 ORTHO05D003109 5.5e-105 384.8 272 100.0
CiPaw.09G160900 Carya illinoinensis HOM05D004441 ORTHO05D003109 1.3e-10 71.2 308 36.0
Duzib160G0195 Durio zibethinus HOM05D004441 ORTHO05D003109 3.0e-10 70.1 175 41.1
Gohir.D06G129200 Gossypium hirsutum HOM05D004441 ORTHO05D003109 3.0e-10 70.1 287 30.7
Gorai.010G150800 Gossypium raimondii HOM05D004441 ORTHO05D003109 3.9e-10 69.7 288 30.9
arahy.Tifrunner.gnm1.ann1.KXRU9A Arachis hypogaea HOM05D004441 ORTHO05D003109 5.1e-10 69.3 311 32.2
VMungo0540G1643 Vigna mungo HOM05D004441 ORTHO05D003109 8.7e-10 68.6 170 42.9
Gohir.A06G124300 Gossypium hirsutum HOM05D004441 ORTHO05D003109 1.5e-09 67.8 288 30.6
Nitab4.5_0007319g0010 Nicotiana tabacum HOM05D004441 ORTHO05D003109 1.9e-09 67.4 288 33.0
Lj1A1210T53 Lonicera japonica HOM05D004441 ORTHO05D003109 2.5e-09 67.0 295 31.2
TPR.G36719 Trifolium pratense HOM05D004441 ORTHO05D003109 2.5e-09 67.0 171 40.9
Gohir.A05G163400 Gossypium hirsutum HOM05D004441 ORTHO05D003109 5.6e-09 65.9 310 30.3
Nitab4.5_0001820g0050 Nicotiana tabacum HOM05D004441 ORTHO05D003109 5.6e-09 65.9 291 32.3
Gohir.D05G166400 Gossypium hirsutum HOM05D004441 ORTHO05D003109 7.4e-09 65.5 309 30.4
Dinv39787 Davidia involucrata HOM05D004441 ORTHO05D003109 9.6e-09 65.1 156 42.3
Thecc.06G194800 Theobroma cacao HOM05D004441 ORTHO05D003109 1.3e-08 64.7 304 29.3
arahy.Tifrunner.gnm1.ann1.W0S7NR Arachis hypogaea HOM05D004441 ORTHO05D003109 1.6e-08 64.3 172 40.7
Hma1.2p1_0191F.1_g083410 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 1.6e-08 64.3 159 44.0
Hma1.2p1_2209F.1_g317155 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 1.6e-08 64.3 159 44.0
Medtr2g012750 Medicago truncatula HOM05D004441 ORTHO05D003109 1.6e-08 64.3 293 30.7
Potri.011G045700 Populus trichocarpa HOM05D004441 ORTHO05D003109 1.6e-08 64.3 176 42.6
Dinv40519 Davidia involucrata HOM05D004441 ORTHO05D003109 6.2e-08 62.4 147 43.5
Manes.17G041200 Manihot esculenta HOM05D004441 ORTHO05D003109 6.2e-08 62.4 125 44.0
Phvul.006G189700 Phaseolus vulgaris HOM05D004441 ORTHO05D003109 6.2e-08 62.4 150 42.7
Lj6g0023239 Lotus japonicus HOM05D004441 ORTHO05D003109 8.1e-08 62.0 132 43.2
PGR004G2153 Punica granatum HOM05D004441 ORTHO05D003109 8.1e-08 62.0 164 41.5
Glyma.13G244100 Glycine max HOM05D004441 ORTHO05D003109 1.1e-07 61.6 298 31.2
Cpa.g.sc27.93 Carica papaya HOM05D004441 ORTHO05D003109 1.4e-07 61.2 79 53.2
COL.COLO4_31538 Corchorus olitorius HOM05D004441 ORTHO05D003109 1.8e-07 60.8 316 29.7
FAN11G1619 Fragaria x ananassa HOM05D004441 ORTHO05D003109 1.8e-07 60.8 170 42.9
Gorai.009G171500 Gossypium raimondii HOM05D004441 ORTHO05D003109 4.0e-07 59.7 309 30.4
MD10G1300500 Malus domestica HOM05D004441 ORTHO05D003109 4.0e-07 59.7 183 39.3
SalBow8G3623 Salvia bowleyana HOM05D004441 ORTHO05D003109 5.3e-07 59.3 284 29.6
SalBow8G4382 Salvia bowleyana HOM05D004441 ORTHO05D003109 5.3e-07 59.3 284 29.6
ClCG03G005640 Citrullus lanatus HOM05D004441 ORTHO05D003109 6.9e-07 58.9 301 30.2
FAN16G1227 Fragaria x ananassa HOM05D004441 ORTHO05D003109 6.9e-07 58.9 172 43.0
FAN25G3261 Fragaria x ananassa HOM05D004441 ORTHO05D003109 6.9e-07 58.9 172 43.0
Cc00_g11510 Coffea canephora HOM05D004441 ORTHO05D003109 1.2e-06 58.2 311 30.2
Duzib192G0975 Durio zibethinus HOM05D004441 ORTHO05D003109 1.2e-06 58.2 179 39.1
Lsat_1_v5_gn_7_20000 Lactuca sativa HOM05D004441 ORTHO05D003109 1.2e-06 58.2 306 31.4
Potri.004G037100 Populus trichocarpa HOM05D004441 ORTHO05D003109 1.2e-06 58.2 137 39.4
DCAR_004123 Daucus carota HOM05D004441 ORTHO05D003109 1.5e-06 57.8 169 36.7
Psat1g207120 Pisum sativum HOM05D004441 ORTHO05D003109 2.0e-06 57.4 168 39.3
ECA236G4168 Erigeron canadensis HOM05D004441 ORTHO05D003109 2.6e-06 57.0 174 39.1
Lalb_Chr20g0122111 Lupinus albus HOM05D004441 ORTHO05D003109 2.6e-06 57.0 291 39.5
MBI18_g13205_MAGBIO Magnolia biondii HOM05D004441 ORTHO05D003109 3.4e-06 56.6 154 39.6
TWI63G0258 Tripterygium wilfordii HOM05D004441 ORTHO05D003109 3.4e-06 56.6 178 38.2
FvH4_3g04520 Fragaria vesca HOM05D004441 ORTHO05D003109 4.5e-06 56.2 171 42.1
Prupe.4G040000 Prunus persica HOM05D004441 ORTHO05D003109 4.5e-06 56.2 325 29.8
Sed0013174 Sechium edule HOM05D004441 ORTHO05D003109 4.5e-06 56.2 176 38.1
TWI38G0459 Tripterygium wilfordii HOM05D004441 ORTHO05D003109 4.5e-06 56.2 178 37.1
Ca_00297_v3 Cicer arietinum L. HOM05D004441 ORTHO05D003109 5.8e-06 55.8 307 30.6
TAR627G0319 Trochodendron aralioides HOM05D004441 ORTHO05D003109 5.8e-06 55.8 161 41.6
Peaxi162Scf00612g00043 Petunia axillaris HOM05D004441 ORTHO05D003109 7.6e-06 55.5 289 28.7
Lalb_Chr15g0089961 Lupinus albus HOM05D004441 ORTHO05D003109 1.0e-05 55.1 284 30.3
Solyc02g078760.1 Solanum lycopersicum HOM05D004441 ORTHO05D003109 1.0e-05 55.1 287 30.3
PGSC0003DMG400005055 Solanum tuberosum HOM05D021131 ORTHO05D022971 1.0e-05 55.1 98 42.9


User provided reference genes

Program Settings