Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 1.6e-307 1058.5 525 100.0
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 3.9e-232 808.1 501 76.4
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 1.2e-230 803.1 500 76.4
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 3.1e-229 798.5 501 75.6
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 5.2e-229 797.7 501 76.0
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 8.9e-229 797.0 501 75.4
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 8.9e-229 797.0 501 75.4
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 8.9e-229 797.0 503 74.8
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 1.2e-228 796.6 502 75.9
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 2.0e-228 795.8 502 74.3
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 2.6e-228 795.4 502 74.5
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 3.4e-228 795.0 504 74.8
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 7.6e-228 793.9 511 73.0
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 7.6e-228 793.9 500 74.2
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 1.7e-227 792.7 502 74.1
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 3.8e-227 791.6 501 75.4
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 8.4e-227 790.4 500 74.0
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 2.4e-226 788.9 502 74.1
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 4.2e-226 788.1 513 73.9
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 1.2e-225 786.6 502 73.5
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 1.2e-225 786.6 502 73.7
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 1.0e-224 783.5 503 75.1
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 1.3e-224 783.1 501 73.7
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 1.3e-224 783.1 503 72.4
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 8.7e-224 780.4 501 72.7
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 4.3e-223 778.1 502 72.9
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 1.1e-221 773.5 499 72.9
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 3.1e-221 771.9 499 72.9
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 2.2e-219 765.8 502 73.5
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 3.8e-219 765.0 501 73.1
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 8.4e-219 763.8 503 72.8
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 2.4e-218 762.3 503 72.8
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 1.6e-217 759.6 504 72.4
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 2.1e-217 759.2 504 71.8
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 2.1e-217 759.2 501 71.7
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 4.6e-217 758.1 501 70.1
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 7.9e-217 757.3 503 71.2
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 5.1e-216 754.6 501 72.1
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 8.7e-216 753.8 501 71.5
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 8.7e-216 753.8 501 71.7
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 1.5e-215 753.1 500 69.6
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 4.3e-215 751.5 501 70.3
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 5.6e-215 751.1 505 70.9
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 9.6e-215 750.4 501 72.1
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 2.1e-214 749.2 500 68.6
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 3.6e-214 748.4 500 69.4
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 4.8e-214 748.0 507 70.4
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 4.8e-214 748.0 500 69.4
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 8.1e-214 747.3 500 68.4
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 3.1e-213 745.3 500 69.4
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 3.1e-213 745.3 502 70.3
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 5.3e-213 744.6 496 70.2
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 5.3e-213 744.6 533 68.1
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 6.9e-213 744.2 504 70.4
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 6.9e-213 744.2 501 69.5
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 1.5e-212 743.0 500 67.8
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 2.0e-212 742.7 507 71.2
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 2.6e-212 742.3 502 68.9
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 3.4e-212 741.9 500 69.2
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 3.4e-212 741.9 500 69.2
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 4.5e-212 741.5 503 69.8
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 7.6e-212 740.7 500 67.0
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 2.9e-211 738.8 503 70.2
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 3.8e-211 738.4 500 67.6
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 3.8e-211 738.4 504 70.2
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 4.9e-211 738.0 509 69.5
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 5.5e-210 734.6 507 69.0
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 1.6e-209 733.0 501 70.9
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 4.6e-209 731.5 505 70.7
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 2.3e-208 729.2 494 70.4
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 8.7e-208 727.2 505 69.9
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 3.3e-207 725.3 505 69.9
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 1.1e-205 720.3 505 69.1
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 1.5e-204 716.5 571 61.8
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 7.1e-202 707.6 506 67.4
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 7.1e-202 707.6 506 67.4
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 2.7e-201 705.7 501 68.3
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 6.0e-201 704.5 520 66.3
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 7.9e-201 704.1 524 66.0
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 1.3e-200 703.4 463 72.1
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 3.9e-200 701.8 510 66.1
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 4.3e-199 698.4 505 65.7
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 2.4e-197 692.6 506 67.2
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 2.4e-197 692.6 512 66.2
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 6.9e-197 691.0 503 65.8
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 1.3e-195 686.8 512 65.2
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 2.5e-186 656.0 522 62.8
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 9.4e-186 654.1 503 63.2
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 9.7e-183 644.0 506 64.2
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 4.8e-182 641.7 504 62.5
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 3.1e-181 639.0 419 72.6
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 1.4e-178 630.2 503 62.6
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 1.2e-177 627.1 499 60.7
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 2.7e-177 625.9 483 63.4
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 1.4e-176 623.6 501 61.9
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 3.9e-176 622.1 501 60.7
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 2.6e-175 619.4 504 60.9
DCAR_018674 Daucus carota HOM05D006476 ORTHO05D008178 1.7e-174 616.7 508 60.2
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 5.9e-172 608.2 508 58.9
Dinv12144 Davidia involucrata HOM05D006476 ORTHO05D008178 2.7e-169 599.4 353 78.5
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 1.9e-162 576.6 406 67.2
Glyma.03G050400 Glycine max HOM05D006476 ORTHO05D008178 1.0e-160 570.9 416 67.8
Pp3c1_41280 Physcomitrium patens HOM05D006476 ORTHO05D008178 2.0e-119 433.7 380 54.7
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 3.5e-116 422.9 257 75.5
AagrBONN_evm.TU.Sc2ySwM_344.2114 Anthoceros agrestis HOM05D006476 ORTHO05D008178 5.1e-115 419.1 401 50.6
SEGI_26269 Sequoiadendron giganteum HOM05D006476 ORTHO05D008178 3.3e-114 416.4 400 50.5
Mapoly0062s0099 Marchantia polymorpha HOM05D006476 ORTHO05D008178 4.7e-113 412.5 372 53.2
SMO364G0439 Selaginella moellendorffii HOM05D006476 ORTHO05D008178 1.5e-106 391.0 409 47.4
AUR62030780 Chenopodium quinoa HOM05D006476 ORTHO05D008178 1.8e-72 277.7 173 74.6
Oeu061560.1 Olea europaea HOM05D006476 ORTHO05D008178 6.9e-64 249.2 162 69.1
MD04G1164400 Malus domestica HOM05D006476 ORTHO05D008178 1.9e-53 214.5 120 82.5
MD04G1164300 Malus domestica HOM05D006476 ORTHO05D008178 5.5e-37 159.8 112 69.6
CBR_g7951 Chara braunii HOM05D006476 ORTHO05D008178 2.4e-32 144.4 322 29.8
Haze_21099 Corylus avellana HOM05D006476 ORTHO05D008178 1.7e-30 138.3 112 58.0
ATR0810G038 Amborella trichopoda HOM05D006476 ORTHO05D008178 1.3e-17 95.5 76 52.6
RcHm_v2.0_Chr3g0461921 Rosa chinensis HOM05D006476 ORTHO05D008178 1.7e-14 85.1 56 66.1
BcaNung03295 Brassica carinata HOM05D006476 ORTHO05D008178 1.7e-09 68.6 62 48.4
C09p74660 Brassica napus HOM05D000872 ORTHO05D000777 1.7e-09 68.6 62 48.4
BolC9t60200H Brassica oleracea HOM05D006476 ORTHO05D008178 1.7e-09 68.6 62 48.4
Cre17.g727100 Chlamydomonas reinhardtii HOM05D006476 ORTHO05D008178 2.4e-08 64.7 72 37.5
MCO15G063 Micromonas commoda HOM05D006476 ORTHO05D008178 6.0e-07 60.1 68 35.3


User provided reference genes

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