Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G1012 Cannabis sativa HOM05D027150 ORTHO05D028423 3.8e-296 1020.8 525 100.0
CANSAT35G0823 Cannabis sativa HOM05D014149 ORTHO05D004930 1.3e-81 308.1 226 71.7
CANSAT35G1962 Cannabis sativa HOM05D027150 ORTHO05D028423 3.1e-72 276.9 169 94.7
CANSAT64G1475 Cannabis sativa HOM05D027150 ORTHO05D028423 3.1e-72 276.9 169 94.7
CANSAT35G1150 Cannabis sativa HOM05D027150 ORTHO05D028423 1.4e-69 268.1 169 90.5
CANSAT35G0287 Cannabis sativa HOM05D014149 ORTHO05D011805 2.4e-56 224.2 347 45.2
CANSAT01G2276 Cannabis sativa HOM05D014149 ORTHO05D011451 4.4e-42 176.8 149 62.4
CANSAT56G1009 Cannabis sativa HOM05D014149 ORTHO05D011805 4.5e-39 166.8 213 51.6
SalBow7G4552 Salvia bowleyana HOM05D014149 ORTHO05D011805 9.2e-32 142.5 578 27.3
CANSAT64G0037 Cannabis sativa HOM05D014149 ORTHO05D011451 2.7e-31 141.0 216 45.8
SalBow6G2387 Salvia bowleyana HOM05D014149 ORTHO05D011805 1.5e-29 135.2 611 25.4
SalBow7G2505 Salvia bowleyana HOM05D001430 ORTHO05D011805 2.3e-27 127.9 446 25.3
SalBow2G1324 Salvia bowleyana HOM05D014149 ORTHO05D011805 1.3e-25 122.1 424 27.1
Oeu002338.1 Olea europaea HOM05D011150 ORTHO05D011451 8.3e-25 119.4 402 27.9
SalBow5G1224 Salvia bowleyana HOM05D010617 ORTHO05D011805 7.8e-23 112.8 526 21.5
TWI36G1199 Tripterygium wilfordii HOM05D012521 ORTHO05D000116 2.3e-22 111.3 115 44.3
CANSAT54G2560 Cannabis sativa HOM05D012521 ORTHO05D011451 3.9e-22 110.5 118 42.4
TWI59G0099 Tripterygium wilfordii HOM05D011150 ORTHO05D011451 3.9e-22 110.5 115 43.5
CANSAT25G0896 Cannabis sativa HOM05D012521 ORTHO05D011451 1.5e-21 108.6 118 42.4
TWI14G0077 Tripterygium wilfordii HOM05D015010 ORTHO05D000116 2.5e-21 107.8 161 35.4
SalBow5G1603 Salvia bowleyana HOM05D010617 ORTHO05D011805 2.8e-20 104.4 133 40.6
SalBow5G2537 Salvia bowleyana HOM05D010617 ORTHO05D011805 3.1e-19 100.9 186 33.3
SalBow5G4492 Salvia bowleyana HOM05D010617 ORTHO05D011805 4.0e-19 100.5 132 40.9
SalBow5G3742 Salvia bowleyana HOM05D010617 ORTHO05D011805 8.9e-19 99.4 148 39.2
SalBow5G3953 Salvia bowleyana HOM05D010617 ORTHO05D011805 1.2e-18 99.0 132 40.2
TWI36G1308 Tripterygium wilfordii HOM05D015010 ORTHO05D019384 1.2e-18 99.0 112 40.2
SalBow8G4289 Salvia bowleyana HOM05D010617 ORTHO05D011805 3.4e-18 97.4 196 35.7
Oeu023903.1 Olea europaea HOM05D011150 ORTHO05D011451 5.8e-18 96.7 439 25.7
CANSAT54G1078 Cannabis sativa HOM05D012521 ORTHO05D011451 7.5e-18 96.3 118 39.8
Oeu004951.1 Olea europaea HOM05D011150 ORTHO05D011451 6.4e-17 93.2 434 24.2
Oeu014361.1 Olea europaea HOM05D011150 ORTHO05D011451 3.2e-16 90.9 264 31.4
SalBow1G8599 Salvia bowleyana HOM05D010189 ORTHO05D012119 1.2e-15 89.0 289 24.2
BcaC04g20991 Brassica carinata HOM05D003835 ORTHO05D004930 2.3e-14 84.7 106 41.5
BcaC04g20843 Brassica carinata HOM05D003835 ORTHO05D004930 1.9e-13 81.6 106 41.5
CANSAT25G1308 Cannabis sativa HOM05D012521 ORTHO05D011451 1.9e-13 81.6 80 47.5
Oeu000848.1 Olea europaea HOM05D011150 ORTHO05D011451 4.3e-13 80.5 376 23.7
SalBow1G5915 Salvia bowleyana HOM05D010617 ORTHO05D011805 4.3e-13 80.5 106 40.6
BcaC03g17353 Brassica carinata HOM05D003835 ORTHO05D004930 7.3e-13 79.7 106 39.6
BcaC04g20985 Brassica carinata HOM05D003835 ORTHO05D004930 7.3e-13 79.7 105 40.0
BcaC05g27891 Brassica carinata HOM05D003835 ORTHO05D004930 7.3e-13 79.7 106 39.6
BcaC02g10813 Brassica carinata HOM05D003835 ORTHO05D004930 9.5e-13 79.3 106 39.6
BcaC04g20623 Brassica carinata HOM05D003835 ORTHO05D004930 9.5e-13 79.3 106 41.5
BcaC04g20889 Brassica carinata HOM05D003835 ORTHO05D004930 1.6e-12 78.6 106 38.7
BolC8t47793H Brassica oleracea HOM05D003835 ORTHO05D004930 1.6e-12 78.6 105 40.0
BcaC08g43746 Brassica carinata HOM05D003835 ORTHO05D004930 2.1e-12 78.2 107 38.3
AUR62036691 Chenopodium quinoa HOM05D023763 ORTHO05D011451 2.1e-12 78.2 115 33.0
BcaB06g26790 Brassica carinata HOM05D003835 ORTHO05D004930 3.6e-12 77.4 133 36.1
BcaC03g16557 Brassica carinata HOM05D007458 ORTHO05D009533 3.6e-12 77.4 104 38.5
Carub.0008s0643 Capsella rubella HOM05D003835 ORTHO05D004930 3.6e-12 77.4 121 34.7
BcaC07g37476 Brassica carinata HOM05D003835 ORTHO05D004930 4.7e-12 77.0 105 40.0
SalBow2G3482 Salvia bowleyana HOM05D014149 ORTHO05D011805 4.7e-12 77.0 213 26.3
BcaC04g20891 Brassica carinata HOM05D003835 ORTHO05D004930 6.2e-12 76.6 106 38.7
BcaC09g49664 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-11 75.9 124 38.7
SalBow1G0579 Salvia bowleyana HOM05D030672 ORTHO05D011805 1.4e-11 75.5 208 26.9
BcaB01g01376 Brassica carinata HOM05D003835 ORTHO05D004930 2.3e-11 74.7 95 40.0
CSS0040956 Camellia sinensis var. sinensis HOM05D035337 ORTHO05D000116 2.3e-11 74.7 84 41.7
BcaC04g20805 Brassica carinata HOM05D003835 ORTHO05D004930 3.1e-11 74.3 108 38.9
SalBow6G2134 Salvia bowleyana HOM05D030672 ORTHO05D002591 5.2e-11 73.6 201 27.4
BcaC06g36461 Brassica carinata HOM05D003835 ORTHO05D004930 6.8e-11 73.2 105 36.2
CANSAT78G0181 Cannabis sativa HOM05D012521 ORTHO05D011451 6.8e-11 73.2 74 44.6
BcaC03g16677 Brassica carinata HOM05D003835 ORTHO05D004930 8.9e-11 72.8 106 37.7
BcaC05g27589 Brassica carinata HOM05D003835 ORTHO05D004930 8.9e-11 72.8 162 32.1
Rhsim08G0029200 Rhododendron simsii HOM05D009413 ORTHO05D000116 8.9e-11 72.8 109 36.7
BolC4t24052H Brassica oleracea HOM05D003835 ORTHO05D004930 1.5e-10 72.0 107 38.3
BcaB01g01339 Brassica carinata HOM05D003835 ORTHO05D004930 2.0e-10 71.6 106 38.7
BcaC09g49753 Brassica carinata HOM05D003835 ORTHO05D004930 2.0e-10 71.6 106 37.7
CSS0015805 Camellia sinensis var. sinensis HOM05D035337 ORTHO05D012209 2.0e-10 71.6 109 35.8
AL4G20670 Arabidopsis lyrata HOM05D003835 ORTHO05D004930 2.6e-10 71.2 121 37.2
BcaC05g27575 Brassica carinata HOM05D003835 ORTHO05D004930 2.6e-10 71.2 94 39.4
BcaC01g01952 Brassica carinata HOM05D003835 ORTHO05D004930 3.4e-10 70.9 106 35.8
BcaB07g33106 Brassica carinata HOM05D003835 ORTHO05D004930 7.5e-10 69.7 97 37.1
BcaC03g16671 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-09 68.6 114 34.2
BcaC06g35162 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-09 68.6 112 33.9
BraA08t32793Z Brassica rapa HOM05D007458 ORTHO05D009533 2.9e-09 67.8 83 42.2
QL05p071009 Quercus lobata HOM05D013248 ORTHO05D000116 3.7e-09 67.4 100 31.0
BcaB06g26909 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-08 65.9 106 38.7
CSS0043108 Camellia sinensis var. sinensis HOM05D035337 ORTHO05D012209 1.1e-08 65.9 133 32.3
BcaC01g02336 Brassica carinata HOM05D003835 ORTHO05D004930 1.4e-08 65.5 86 40.7
BcaC03g16198 Brassica carinata HOM05D003835 ORTHO05D004930 1.4e-08 65.5 144 31.2
Haze_22203 Corylus avellana HOM05D022083 ORTHO05D000116 1.4e-08 65.5 119 33.6
Oeu009578.1 Olea europaea HOM05D011150 ORTHO05D011451 1.4e-08 65.5 336 24.7
Gohir.A12G182300 Gossypium hirsutum HOM05D004287 ORTHO05D004569 1.9e-08 65.1 102 40.2
MBI08_g10608_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 1.9e-08 65.1 110 34.5
Gohir.D12G185200 Gossypium hirsutum HOM05D004287 ORTHO05D004569 2.4e-08 64.7 102 39.2
Gorai.008G198600 Gossypium raimondii HOM05D004287 ORTHO05D004569 2.4e-08 64.7 102 39.2
SalBow6G5513 Salvia bowleyana HOM05D033336 ORTHO05D012119 2.4e-08 64.7 99 35.4
BcaC05g27887 Brassica carinata HOM05D003835 ORTHO05D004930 3.2e-08 64.3 94 36.2
BcaC08g44357 Brassica carinata HOM05D003835 ORTHO05D004930 4.1e-08 63.9 112 31.2
BraA05t21182Z Brassica rapa HOM05D003835 ORTHO05D004930 4.1e-08 63.9 105 33.3
BcaC05g28699 Brassica carinata HOM05D007458 ORTHO05D009533 5.4e-08 63.5 84 40.5
QL02p091007 Quercus lobata HOM05D009413 ORTHO05D000116 5.4e-08 63.5 110 36.4
BcaC03g14834 Brassica carinata HOM05D003835 ORTHO05D004930 7.1e-08 63.2 113 31.0
BcaC03g16751 Brassica carinata HOM05D003835 ORTHO05D004930 7.1e-08 63.2 120 30.0
QL03p072853 Quercus lobata HOM05D009413 ORTHO05D000116 7.1e-08 63.2 102 33.3
QL03p072862 Quercus lobata HOM05D009413 ORTHO05D000116 7.1e-08 63.2 102 33.3
BcaB08g35159 Brassica carinata HOM05D003835 ORTHO05D004930 9.2e-08 62.8 112 31.2
MBI16_g34672_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 9.2e-08 62.8 105 33.3
QL04p042823 Quercus lobata HOM05D009413 ORTHO05D000116 9.2e-08 62.8 110 35.5
BcaC01g02043 Brassica carinata HOM05D003835 ORTHO05D004930 1.2e-07 62.4 84 38.1
QL08p037960 Quercus lobata HOM05D000170 ORTHO05D000154 1.2e-07 62.4 112 34.8
BcaC09g49552 Brassica carinata HOM05D003835 ORTHO05D004930 1.6e-07 62.0 76 42.1
Cfa021302 Carpinus fangiana HOM05D026864 ORTHO05D000116 1.6e-07 62.0 116 32.8
Oeu057697.1 Olea europaea HOM05D011150 ORTHO05D011451 1.6e-07 62.0 103 34.0
Oeu051288.1 Olea europaea HOM05D002774 ORTHO05D000116 2.1e-07 61.6 91 33.0
QL04p089085 Quercus lobata HOM05D009413 ORTHO05D000116 2.1e-07 61.6 102 32.4
QL06p047151 Quercus lobata HOM05D009413 ORTHO05D000116 2.1e-07 61.6 107 35.5
QL10p025857 Quercus lobata HOM05D009413 ORTHO05D000116 2.1e-07 61.6 107 35.5
QL10p046964 Quercus lobata HOM05D009413 ORTHO05D000116 2.1e-07 61.6 107 35.5
QL10p064222 Quercus lobata HOM05D000009 ORTHO05D000116 2.1e-07 61.6 102 33.3
CSS0037614 Camellia sinensis var. sinensis HOM05D010739 ORTHO05D012209 2.7e-07 61.2 67 41.8
Oeu010409.1 Olea europaea HOM05D000396 ORTHO05D000116 2.7e-07 61.2 82 36.6
Oeu022696.1 Olea europaea HOM05D002774 ORTHO05D000116 2.7e-07 61.2 95 32.6
Haze_12632 Corylus avellana HOM05D000001 ORTHO05D000003 3.5e-07 60.8 116 35.3
Oeu020579.1 Olea europaea HOM05D002774 ORTHO05D000116 3.5e-07 60.8 81 38.3
BcaC04g20857 Brassica carinata HOM05D003835 ORTHO05D004930 4.6e-07 60.5 106 34.9
BolC5t32809H Brassica oleracea HOM05D007458 ORTHO05D009533 4.6e-07 60.5 91 38.5
BcaB06g26993 Brassica carinata HOM05D007458 ORTHO05D009533 6.0e-07 60.1 83 39.8
BcaC02g10560 Brassica carinata HOM05D003835 ORTHO05D004930 6.0e-07 60.1 105 32.4
BcaNung05987 Brassica carinata HOM05D003835 ORTHO05D004930 6.0e-07 60.1 84 36.9
Duzib084G0708 Durio zibethinus HOM05D004287 ORTHO05D000116 7.8e-07 59.7 115 34.8
SGA_v2.0_scaffold68G22922 Striga asiatica HOM05D050415 ORTHO05D000116 7.8e-07 59.7 87 35.6
BcaC06g35990 Brassica carinata HOM05D003835 ORTHO05D004930 1.0e-06 59.3 89 38.2
BolC8t50199H Brassica oleracea HOM05D003835 ORTHO05D004930 1.3e-06 58.9 91 37.4
Oeu021590.1 Olea europaea HOM05D002774 ORTHO05D000116 1.3e-06 58.9 91 34.1
Oeu028351.1 Olea europaea HOM05D002774 ORTHO05D000116 1.3e-06 58.9 79 34.2
BcaC07g39533 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-06 58.5 109 31.2
Oeu003150.1 Olea europaea HOM05D000396 ORTHO05D000116 2.3e-06 58.2 75 34.7
Oeu063908.1 Olea europaea HOM05D002774 ORTHO05D000116 2.3e-06 58.2 91 33.0
QL05p031643 Quercus lobata HOM05D009413 ORTHO05D000116 2.3e-06 58.2 78 38.5
QL10p041460 Quercus lobata HOM05D009413 ORTHO05D000116 2.3e-06 58.2 78 38.5
QL11p005301 Quercus lobata HOM05D009413 ORTHO05D000116 2.3e-06 58.2 78 38.5
Ciclev10019154m.g Citrus clementina HOM05D009413 ORTHO05D000116 3.9e-06 57.4 225 26.7
MBI03_g14059_MAGBIO Magnolia biondii HOM05D009404 ORTHO05D000116 3.9e-06 57.4 135 25.2
Oeu015366.1 Olea europaea HOM05D002774 ORTHO05D000116 3.9e-06 57.4 79 35.4
MBI03_g00028_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 5.1e-06 57.0 105 32.4
MBI12_g04512_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 5.1e-06 57.0 100 32.0
Oeu004245.1 Olea europaea HOM05D002774 ORTHO05D000116 5.1e-06 57.0 90 33.3
Oeu037847.1 Olea europaea HOM05D002774 ORTHO05D000116 5.1e-06 57.0 91 31.9
QL93p1902_0571 Quercus lobata HOM05D009413 ORTHO05D000116 5.1e-06 57.0 102 32.4
BcaC06g36790 Brassica carinata HOM05D003835 ORTHO05D004930 6.6e-06 56.6 84 36.9
MBI10_g21035_MAGBIO Magnolia biondii HOM05D009404 ORTHO05D000116 6.6e-06 56.6 109 28.4
Oeu007701.1 Olea europaea HOM05D011150 ORTHO05D011451 6.6e-06 56.6 473 23.7
Oeu008323.1 Olea europaea HOM05D000396 ORTHO05D000116 6.6e-06 56.6 83 32.5
Oeu014996.1 Olea europaea HOM05D000396 ORTHO05D000116 6.6e-06 56.6 75 34.7
BcaC04g20888 Brassica carinata HOM05D003835 ORTHO05D004930 8.6e-06 56.2 74 40.5
RcHm_v2.0_Chr2g0084191 Rosa chinensis HOM05D031301 ORTHO05D010628 8.6e-06 56.2 82 30.5


User provided reference genes

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