Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G0915 Cannabis sativa HOM05D012483 ORTHO05D000352 7.3e-175 617.1 303 100.0
CANSAT35G1177 Cannabis sativa HOM05D012483 ORTHO05D000352 1.2e-105 387.1 269 74.7
CANSAT54G2130 Cannabis sativa HOM05D012483 ORTHO05D000352 1.4e-85 320.5 275 64.7
CANSAT80G0247 Cannabis sativa HOM05D012483 ORTHO05D000352 8.9e-80 301.2 284 59.5
CANSAT54G0136 Cannabis sativa HOM05D000429 ORTHO05D000352 3.9e-75 285.8 181 80.1
CANSAT35G1950 Cannabis sativa HOM05D000429 ORTHO05D000352 1.6e-73 280.4 304 56.2
CANSAT78G0316 Cannabis sativa HOM05D000429 ORTHO05D000352 6.0e-68 261.9 286 53.1
CANSAT56G0538 Cannabis sativa HOM05D012483 ORTHO05D000352 9.5e-66 254.6 337 48.1
CANSAT80G0215 Cannabis sativa HOM05D008422 ORTHO05D000352 1.4e-64 250.8 150 82.0
CANSAT71G0010 Cannabis sativa HOM05D012483 ORTHO05D000880 3.2e-61 239.6 252 56.3
CANSAT78G1657 Cannabis sativa HOM05D012483 ORTHO05D000352 1.2e-57 227.6 280 48.6
CANSAT21G0361 Cannabis sativa HOM05D012483 ORTHO05D000352 2.6e-55 219.9 256 50.4
CANSAT35G0088 Cannabis sativa HOM05D012483 ORTHO05D000352 3.4e-55 219.5 185 66.5
CANSAT54G0532 Cannabis sativa HOM05D000429 ORTHO05D000352 4.2e-53 212.6 133 78.2
CANSAT21G0172 Cannabis sativa HOM05D012483 ORTHO05D000352 7.3e-50 201.8 183 61.2
CANSAT25G1487 Cannabis sativa HOM05D000429 ORTHO05D000352 7.6e-47 191.8 141 68.1
CANSAT11G0771 Cannabis sativa HOM05D012483 ORTHO05D000352 8.7e-43 178.3 296 39.9
CANSAT80G1350 Cannabis sativa HOM05D000429 ORTHO05D000352 7.4e-42 175.3 116 73.3
CANSAT78G2313 Cannabis sativa HOM05D000429 ORTHO05D000352 7.1e-37 158.7 185 53.0
CANSAT25G2129 Cannabis sativa HOM05D000429 ORTHO05D000352 1.9e-34 150.6 108 69.4
CANSAT11G1703 Cannabis sativa HOM05D012483 ORTHO05D000352 8.4e-30 135.2 171 49.7
CANSAT80G0171 Cannabis sativa HOM05D012483 ORTHO05D000880 2.5e-29 133.7 75 80.0
CANSAT78G0921 Cannabis sativa HOM05D012483 ORTHO05D000880 5.3e-24 115.9 58 89.7
CANSAT80G2507 Cannabis sativa HOM05D008422 ORTHO05D000352 8.5e-22 108.6 229 30.1
CANSAT11G0599 Cannabis sativa HOM05D000429 ORTHO05D000352 4.2e-21 106.3 306 28.8
CANSAT54G0803 Cannabis sativa HOM05D008422 ORTHO05D000352 2.7e-20 103.6 273 28.6
CANSAT21G2110 Cannabis sativa HOM05D008422 ORTHO05D000352 4.8e-17 92.8 341 25.5
CANSAT54G2836 Cannabis sativa HOM05D000429 ORTHO05D000352 3.4e-15 86.7 324 25.3
Manes.14G150022 Manihot esculenta HOM05D000429 ORTHO05D000880 3.4e-15 86.7 288 28.5
CANSAT56G0555 Cannabis sativa HOM05D000429 ORTHO05D000352 4.5e-15 86.3 165 33.3
CANSAT11G1685 Cannabis sativa HOM05D009938 ORTHO05D000880 5.9e-15 85.9 242 28.9
CANSAT25G2709 Cannabis sativa HOM05D009938 ORTHO05D000880 5.9e-15 85.9 270 27.8
CANSAT54G1627 Cannabis sativa HOM05D000429 ORTHO05D000352 5.9e-15 85.9 140 34.3
CANSAT25G3092 Cannabis sativa HOM05D000429 ORTHO05D000352 1.0e-14 85.1 289 26.3
CANSAT80G1559 Cannabis sativa HOM05D008422 ORTHO05D000352 1.3e-14 84.7 166 32.5
CANSAT78G0541 Cannabis sativa HOM05D019409 ORTHO05D000352 5.0e-14 82.8 108 38.9
CANSAT64G0185 Cannabis sativa HOM05D000429 ORTHO05D000352 8.5e-14 82.0 132 34.8
CANSAT56G4516 Cannabis sativa HOM05D000429 ORTHO05D000352 1.9e-13 80.9 113 38.9
CANSAT01G0535 Cannabis sativa HOM05D008422 ORTHO05D000352 3.2e-13 80.1 166 33.1
CANSAT56G0797 Cannabis sativa HOM05D000429 ORTHO05D000352 4.2e-13 79.7 278 24.8
CANSAT78G2291 Cannabis sativa HOM05D000429 ORTHO05D000352 4.2e-13 79.7 138 35.5
CANSAT01G1361 Cannabis sativa HOM05D000429 ORTHO05D000352 9.4e-13 78.6 148 37.8
CANSAT11G1830 Cannabis sativa HOM05D000429 ORTHO05D000352 1.2e-12 78.2 146 37.0
CANSAT64G1649 Cannabis sativa HOM05D000429 ORTHO05D000352 1.2e-12 78.2 108 37.0
CANSAT01G1297 Cannabis sativa HOM05D000429 ORTHO05D000352 4.7e-12 76.3 136 33.1
CANSAT54G2253 Cannabis sativa HOM05D008422 ORTHO05D000352 4.7e-12 76.3 165 31.5
CANSAT64G1863 Cannabis sativa HOM05D009938 ORTHO05D000880 7.9e-12 75.5 219 26.0
DCAR_031974 Daucus carota HOM05D000429 ORTHO05D000352 1.0e-11 75.1 276 26.1
CANSAT56G4150 Cannabis sativa HOM05D000429 ORTHO05D000352 1.4e-11 74.7 164 31.7
CANSAT80G0282 Cannabis sativa HOM05D008422 ORTHO05D000352 1.4e-11 74.7 167 31.7
Manes.02G203175 Manihot esculenta HOM05D000429 ORTHO05D000352 1.4e-11 74.7 304 27.0
CANSAT56G2499 Cannabis sativa HOM05D000429 ORTHO05D000352 1.8e-11 74.3 148 31.8
CANSAT54G2683 Cannabis sativa HOM05D000429 ORTHO05D000352 3.9e-11 73.2 186 30.1
CANSAT80G0962 Cannabis sativa HOM05D000429 ORTHO05D000352 3.9e-11 73.2 173 29.5
Manes.18G025086 Manihot esculenta HOM05D000429 ORTHO05D000880 1.5e-10 71.2 310 23.9
arahy.Tifrunner.gnm1.ann1.99K3J2 Arachis hypogaea HOM05D000047 ORTHO05D000044 2.0e-10 70.9 274 27.7
arahy.Tifrunner.gnm1.ann1.R1MCB0 Arachis hypogaea HOM05D000429 ORTHO05D000880 2.0e-10 70.9 267 26.6
TWI75G0872 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 2.0e-10 70.9 266 24.4
CANSAT50G0001 Cannabis sativa HOM05D008422 ORTHO05D000352 5.7e-10 69.3 166 29.5
CANSAT80G1044 Cannabis sativa HOM05D008422 ORTHO05D000352 5.7e-10 69.3 138 32.6
ECA238G4817 Erigeron canadensis HOM05D000047 ORTHO05D000044 5.7e-10 69.3 284 22.9
TWI59G1246 Tripterygium wilfordii HOM05D000429 ORTHO05D008058 5.7e-10 69.3 242 24.0
CANSAT80G0164 Cannabis sativa HOM05D008422 ORTHO05D000352 9.7e-10 68.6 144 33.3
arahy.Tifrunner.gnm1.ann1.W6UN1E Arachis hypogaea HOM05D003069 ORTHO05D000880 2.8e-09 67.0 270 24.4
CANSAT35G1743 Cannabis sativa HOM05D008422 ORTHO05D000352 3.7e-09 66.6 148 31.1
ECA236G4056 Erigeron canadensis HOM05D003069 ORTHO05D002578 3.7e-09 66.6 243 24.3
CANSAT11G0201 Cannabis sativa HOM05D008422 ORTHO05D000352 4.8e-09 66.2 84 39.3
ECA247G0122 Erigeron canadensis HOM05D000047 ORTHO05D000044 6.3e-09 65.9 247 23.1
CANSAT11G0413 Cannabis sativa HOM05D008422 ORTHO05D000352 1.1e-08 65.1 138 31.2
CANSAT11G2256 Cannabis sativa HOM05D009938 ORTHO05D000352 1.1e-08 65.1 166 28.9
CANSAT21G0753 Cannabis sativa HOM05D008422 ORTHO05D000352 1.4e-08 64.7 109 35.8
CANSAT54G1407 Cannabis sativa HOM05D000047 ORTHO05D000044 1.4e-08 64.7 40 82.5
ECA236G4115 Erigeron canadensis HOM05D000047 ORTHO05D002578 1.4e-08 64.7 273 23.8
CANSAT25G2247 Cannabis sativa HOM05D008422 ORTHO05D000352 1.8e-08 64.3 160 30.0
CANSAT78G2509 Cannabis sativa HOM05D008422 ORTHO05D000352 2.4e-08 63.9 83 38.6
CANSAT54G0908 Cannabis sativa HOM05D009938 ORTHO05D000880 3.1e-08 63.5 113 35.4
ECA233G1791 Erigeron canadensis HOM05D003069 ORTHO05D002578 3.1e-08 63.5 247 23.5
QL05p030578 Quercus lobata HOM05D000047 ORTHO05D000044 3.1e-08 63.5 262 23.3
CANSAT21G1062 Cannabis sativa HOM05D000429 ORTHO05D000352 4.1e-08 63.2 102 35.3
CANSAT21G1066 Cannabis sativa HOM05D009938 ORTHO05D000880 4.1e-08 63.2 242 26.4
CANSAT25G0316 Cannabis sativa HOM05D009938 ORTHO05D000352 4.1e-08 63.2 130 31.5
CANSAT54G1906 Cannabis sativa HOM05D008422 ORTHO05D000352 4.1e-08 63.2 138 30.4
CANSAT64G2031 Cannabis sativa HOM05D008422 ORTHO05D000352 4.1e-08 63.2 102 35.3
Manes.18G056202 Manihot esculenta HOM05D000429 ORTHO05D000880 4.1e-08 63.2 313 24.3
Oeu005427.1 Olea europaea HOM05D000429 ORTHO05D008058 4.1e-08 63.2 238 23.9
TWI39G1023 Tripterygium wilfordii HOM05D000429 ORTHO05D008058 4.1e-08 63.2 250 25.2
CANSAT35G0045 Cannabis sativa HOM05D008422 ORTHO05D000352 5.3e-08 62.8 79 38.0
CANSAT80G1023 Cannabis sativa HOM05D008422 ORTHO05D000352 5.3e-08 62.8 171 30.4
Oeu015060.1 Olea europaea HOM05D000429 ORTHO05D008058 7.0e-08 62.4 226 23.5
CANSAT01G2744 Cannabis sativa HOM05D000429 ORTHO05D000352 1.2e-07 61.6 102 36.3
ECA233G1035 Erigeron canadensis HOM05D003069 ORTHO05D002578 1.2e-07 61.6 244 25.4
Manes.10G076111 Manihot esculenta HOM05D000047 ORTHO05D000352 1.2e-07 61.6 316 27.2
QL93p0205_0258 Quercus lobata HOM05D000047 ORTHO05D000044 1.2e-07 61.6 264 23.5
CANSAT25G0953 Cannabis sativa HOM05D008422 ORTHO05D000352 2.0e-07 60.8 98 35.7
CANSAT54G0905 Cannabis sativa HOM05D000429 ORTHO05D000352 2.0e-07 60.8 101 33.7
CANSAT80G0281 Cannabis sativa HOM05D008422 ORTHO05D000352 2.0e-07 60.8 84 36.9
CANSAT25G0239 Cannabis sativa HOM05D000429 ORTHO05D000352 2.6e-07 60.5 61 45.9
CANSAT80G1547 Cannabis sativa HOM05D008422 ORTHO05D000352 2.6e-07 60.5 70 41.4
CANSAT80G1770 Cannabis sativa HOM05D000429 ORTHO05D000352 2.6e-07 60.5 102 35.3
Oeu033810.1 Olea europaea HOM05D000429 ORTHO05D000352 2.6e-07 60.5 252 23.4
CANSAT11G0966 Cannabis sativa HOM05D008422 ORTHO05D000352 3.4e-07 60.1 213 25.8
ECA246G3906 Erigeron canadensis HOM05D003069 ORTHO05D002578 3.4e-07 60.1 264 25.8
CANSAT11G2636 Cannabis sativa HOM05D000429 ORTHO05D000352 4.5e-07 59.7 102 35.3
CANSAT21G0148 Cannabis sativa HOM05D009938 ORTHO05D000352 4.5e-07 59.7 85 41.2
CANSAT54G2914 Cannabis sativa HOM05D008422 ORTHO05D000352 4.5e-07 59.7 102 34.3
CANSAT80G0151 Cannabis sativa HOM05D009938 ORTHO05D000880 4.5e-07 59.7 107 33.6
ECA232G3754 Erigeron canadensis HOM05D003069 ORTHO05D002578 5.9e-07 59.3 246 24.8
CANSAT80G0721 Cannabis sativa HOM05D000429 ORTHO05D000352 7.7e-07 58.9 101 34.7
COL.COLO4_19353 Corchorus olitorius HOM05D000013 ORTHO05D000011 7.7e-07 58.9 239 21.3
Oeu033492.1 Olea europaea HOM05D000047 ORTHO05D008058 7.7e-07 58.9 259 25.9
arahy.Tifrunner.gnm1.ann1.UC2LFY Arachis hypogaea HOM05D000429 ORTHO05D000352 1.0e-06 58.5 257 26.1
CANSAT64G1284 Cannabis sativa HOM05D009938 ORTHO05D000880 1.0e-06 58.5 75 37.3
ECA240G3679 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.0e-06 58.5 241 26.1
CANSAT21G1212 Cannabis sativa HOM05D008422 ORTHO05D000352 1.7e-06 57.8 95 35.8
CANSAT80G2076 Cannabis sativa HOM05D000429 ORTHO05D000352 1.7e-06 57.8 101 32.7
Oeu054349.1 Olea europaea HOM05D000047 ORTHO05D000044 1.7e-06 57.8 252 22.6
Oeu057826.1 Olea europaea HOM05D000047 ORTHO05D000044 1.7e-06 57.8 236 23.3
PSO339G6488 Papaver somniferum HOM05D000429 ORTHO05D002449 1.7e-06 57.8 255 25.1
ECA240G1667 Erigeron canadensis HOM05D003069 ORTHO05D002578 2.2e-06 57.4 268 24.3
ECA247G2794 Erigeron canadensis HOM05D003069 ORTHO05D002578 2.2e-06 57.4 249 26.5
Oeu014370.1 Olea europaea HOM05D000429 ORTHO05D000352 2.9e-06 57.0 276 24.6
PSO198G0005 Papaver somniferum HOM05D000429 ORTHO05D002449 2.9e-06 57.0 253 23.3
CANSAT01G0191 Cannabis sativa HOM05D009938 ORTHO05D000880 5.0e-06 56.2 75 36.0
CANSAT01G3249 Cannabis sativa HOM05D000017 ORTHO05D000013 5.0e-06 56.2 47 53.2
PSO478G1612 Papaver somniferum HOM05D000429 ORTHO05D000352 5.0e-06 56.2 288 20.8
CANSAT78G0676 Cannabis sativa HOM05D008422 ORTHO05D000352 6.5e-06 55.8 239 25.1
ECA232G1639 Erigeron canadensis HOM05D003069 ORTHO05D002578 6.5e-06 55.8 250 26.0
ECA232G2279 Erigeron canadensis HOM05D003069 ORTHO05D002578 6.5e-06 55.8 261 26.1
Oeu058894.1 Olea europaea HOM05D000047 ORTHO05D008058 6.5e-06 55.8 240 22.5
CANSAT01G0251 Cannabis sativa HOM05D000429 ORTHO05D000352 8.5e-06 55.5 56 44.6
ECA238G3517 Erigeron canadensis HOM05D000047 ORTHO05D000044 8.5e-06 55.5 63 39.7
Oeu023226.1 Olea europaea HOM05D000047 ORTHO05D008058 8.5e-06 55.5 253 24.9
Oeu037482.1 Olea europaea HOM05D000429 ORTHO05D000352 8.5e-06 55.5 252 22.2
Oeu060525.1 Olea europaea HOM05D000047 ORTHO05D008058 8.5e-06 55.5 251 21.1


User provided reference genes

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