Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G0855 Cannabis sativa HOM05D004604 ORTHO05D005744 0.0e+00 1284.6 675 100.0
Manes.10G013900 Manihot esculenta HOM05D004604 ORTHO05D005744 9.1e-218 760.8 625 63.5
MD01G1132500 Malus domestica HOM05D004604 ORTHO05D005744 5.9e-217 758.1 623 62.4
MD07G1220300 Malus domestica HOM05D004604 ORTHO05D005744 1.0e-216 757.3 623 63.4
TWI09G1217 Tripterygium wilfordii HOM05D004604 ORTHO05D005744 3.0e-213 745.7 626 61.0
Gohir.A10G235000 Gossypium hirsutum HOM05D004604 ORTHO05D005744 6.8e-213 744.6 625 61.3
Gorai.011G285800 Gossypium raimondii HOM05D004604 ORTHO05D005744 2.8e-211 739.2 625 61.1
RcHm_v2.0_Chr1g0369991 Rosa chinensis HOM05D004604 ORTHO05D005744 7.0e-210 734.6 620 61.5
Cfa001330 Carpinus fangiana HOM05D004604 ORTHO05D005744 2.9e-208 729.2 622 62.7
Prupe.2G248700 Prunus persica HOM05D004604 ORTHO05D005744 2.9e-208 729.2 623 61.6
Thecc.10G020600 Theobroma cacao HOM05D004604 ORTHO05D005744 1.9e-207 726.5 625 60.6
TAR623G0226 Trochodendron aralioides HOM05D004604 ORTHO05D005744 9.5e-207 724.2 635 59.7
CSS0014761 Camellia sinensis var. sinensis HOM05D004604 ORTHO05D005744 1.8e-205 719.9 629 59.5
Atru.chr12.19 Acer truncatum HOM05D004604 ORTHO05D005744 2.3e-205 719.5 626 60.9
Sabra10G0146600 Salix brachista HOM05D004604 ORTHO05D005744 5.7e-204 714.9 625 60.3
Lj1C953T18 Lonicera japonica HOM05D004604 ORTHO05D005744 7.5e-204 714.5 628 59.6
Potri.010G190100 Populus trichocarpa HOM05D004604 ORTHO05D005744 1.7e-203 713.4 629 60.1
Ciclev10030943m.g Citrus clementina HOM05D004604 ORTHO05D005744 3.7e-203 712.2 632 60.6
FAN10G0865 Fragaria x ananassa HOM05D004604 ORTHO05D005744 5.4e-202 708.4 623 59.6
TWI73G0703 Tripterygium wilfordii HOM05D004604 ORTHO05D005744 9.2e-202 707.6 661 57.3
Cpa.g.sc19.189 Carica papaya HOM05D004604 ORTHO05D005744 1.5e-199 700.3 628 59.4
FvH4_7g24330 Fragaria vesca HOM05D004604 ORTHO05D005744 2.5e-199 699.5 623 59.6
CiPaw.02G191600 Carya illinoinensis HOM05D004604 ORTHO05D005744 7.3e-199 698.0 628 59.7
Nn2g11459 Nelumbo nucifera HOM05D004604 ORTHO05D005744 1.6e-198 696.8 627 57.6
Dinv34395 Davidia involucrata HOM05D004604 ORTHO05D005744 2.1e-198 696.4 560 64.8
Rhsim03G0142100 Rhododendron simsii HOM05D004604 ORTHO05D005744 4.0e-197 692.2 625 58.4
arahy.Tifrunner.gnm1.ann1.E2DHW8 Arachis hypogaea HOM05D004604 ORTHO05D005744 5.2e-197 691.8 625 57.8
CSS0028164 Camellia sinensis var. sinensis HOM05D004604 ORTHO05D005744 3.4e-196 689.1 623 58.4
FAN01G3126 Fragaria x ananassa HOM05D004604 ORTHO05D005744 5.8e-196 688.3 675 55.1
Glyma.18G028600 Glycine max HOM05D004604 ORTHO05D005744 1.7e-195 686.8 628 59.2
Phvul.001G241900 Phaseolus vulgaris HOM05D004604 ORTHO05D005744 1.7e-195 686.8 624 59.3
Lalb_Chr18g0052631 Lupinus albus HOM05D004604 ORTHO05D005744 2.4e-194 682.9 626 58.8
PGR044G2346 Punica granatum HOM05D004604 ORTHO05D005744 3.2e-194 682.6 628 58.4
Hma1.2p1_0446F.1_g154570 Hydrangea macrophylla HOM05D004604 ORTHO05D005744 6.6e-192 674.9 623 58.1
VMungo1383G0266 Vigna mungo HOM05D004604 ORTHO05D005744 6.6e-192 674.9 626 57.8
Duzib114G0112 Durio zibethinus HOM05D004604 ORTHO05D005744 1.5e-191 673.7 627 58.1
Hund13846 Selenicereus undatus HOM05D004604 ORTHO05D005744 7.3e-191 671.4 626 57.8
Lj6g0016498 Lotus japonicus HOM05D004604 ORTHO05D005744 8.1e-190 667.9 630 56.3
Lalb_Chr15g0084181 Lupinus albus HOM05D004604 ORTHO05D005744 1.8e-189 666.8 626 57.3
Glyma.11G228500 Glycine max HOM05D004604 ORTHO05D005744 2.3e-189 666.4 628 57.8
FAN06G3796 Fragaria x ananassa HOM05D004604 ORTHO05D005744 6.8e-189 664.8 586 59.9
ClCG11G006230 Citrullus lanatus HOM05D004604 ORTHO05D005744 8.9e-189 664.5 628 56.4
Cc02_g06650 Coffea canephora HOM05D004604 ORTHO05D005744 4.4e-188 662.1 632 55.4
Medtr3g070310 Medicago truncatula HOM05D004604 ORTHO05D005744 1.3e-187 660.6 624 57.1
Eucgr.J00226 Eucalyptus grandis HOM05D004604 ORTHO05D005744 1.4e-186 657.1 639 56.2
TPR.G2507 Trifolium pratense HOM05D004604 ORTHO05D005744 1.9e-186 656.8 624 55.8
Lsat_1_v5_gn_2_122780 Lactuca sativa HOM05D004604 ORTHO05D005744 3.5e-185 652.5 642 55.9
CsaV3_6G001760 Cucumis sativus L. HOM05D004604 ORTHO05D005744 7.8e-185 651.4 621 55.7
Ca_15268_v3 Cicer arietinum L. HOM05D004604 ORTHO05D005744 3.0e-184 649.4 624 55.8
Psat5g126400 Pisum sativum HOM05D004604 ORTHO05D005744 1.9e-183 646.7 623 55.4
HanXRQChr14g0459851 Helianthus annuus HOM05D004604 ORTHO05D005744 4.3e-183 645.6 630 54.9
ECA238G1235 Erigeron canadensis HOM05D004604 ORTHO05D005744 1.2e-182 644.0 622 56.1
PSO339G2357 Papaver somniferum HOM05D004604 ORTHO05D005744 1.4e-181 640.6 644 54.3
Aqoxy4G02603 Aquilegia oxysepala HOM05D004604 ORTHO05D005744 6.8e-181 638.3 626 53.8
MELO3C008290.2 Cucumis melo HOM05D004604 ORTHO05D005744 3.4e-180 636.0 608 55.8
PSO384G4393 Papaver somniferum HOM05D004604 ORTHO05D005744 1.7e-179 633.6 632 54.6
Peaxi162Scf00825g00019 Petunia axillaris HOM05D004604 ORTHO05D005744 2.9e-179 632.9 625 54.4
PGSC0003DMG400023817 Solanum tuberosum HOM05D004604 ORTHO05D005744 2.9e-179 632.9 622 54.3
Sopen06g017720 Solanum pennellii HOM05D004604 ORTHO05D005744 1.9e-178 630.2 623 54.4
Eucgr.J00228 Eucalyptus grandis HOM05D004604 ORTHO05D005744 2.4e-178 629.8 625 54.7
Nitab4.5_0000802g0040 Nicotiana tabacum HOM05D004604 ORTHO05D005744 4.1e-178 629.0 618 53.7
THA.LOC104816553 Tarenaya hassleriana HOM05D004604 ORTHO05D005744 3.5e-177 625.9 626 52.9
Dinv17981 Davidia involucrata HOM05D004604 ORTHO05D005744 6.0e-177 625.2 481 66.3
Nitab4.5_0005174g0010 Nicotiana tabacum HOM05D004604 ORTHO05D005744 6.0e-177 625.2 618 54.4
SGA_v2.0_scaffold76G25082 Striga asiatica HOM05D004604 ORTHO05D005744 6.6e-176 621.7 632 52.5
TAR369G0014 Trochodendron aralioides HOM05D004604 ORTHO05D005744 5.6e-175 618.6 577 57.0
Ah.16g103410 Amaranthus hybridus HOM05D004604 ORTHO05D005744 7.3e-175 618.2 640 52.3
Haze_17213 Corylus avellana HOM05D004604 ORTHO05D005744 2.1e-174 616.7 607 56.8
Sp6g37190 Schrenkiella parvula HOM05D004604 ORTHO05D005744 2.4e-173 613.2 629 52.1
GSVIVG01032843001 Vitis vinifera HOM05D004604 ORTHO05D005744 2.4e-173 613.2 624 53.2
CAN.G17.11 Capsicum annuum HOM05D004604 ORTHO05D005744 5.2e-173 612.1 621 52.8
EL10Ac2g04814 Beta vulgaris HOM05D004604 ORTHO05D005744 6.9e-173 611.7 631 53.1
Solyc06g051760.3 Solanum lycopersicum HOM05D004604 ORTHO05D005744 8.9e-173 611.3 625 52.8
HanXRQChr14g0459841 Helianthus annuus HOM05D004604 ORTHO05D005744 9.9e-172 607.8 624 52.9
Eucgr.J00230 Eucalyptus grandis HOM05D004604 ORTHO05D005744 1.7e-171 607.1 628 52.9
Haze_17214 Corylus avellana HOM05D004604 ORTHO05D005744 3.8e-171 605.9 640 53.8
Potri.008G067000 Populus trichocarpa HOM05D004604 ORTHO05D005744 3.8e-171 605.9 531 60.5
Carub.0003s1055 Capsella rubella HOM05D004604 ORTHO05D005744 8.4e-171 604.7 625 53.4
FAN03G0827 Fragaria x ananassa HOM05D004604 ORTHO05D005744 8.4e-171 604.7 695 49.9
arahy.Tifrunner.gnm1.ann1.C37ZT5 Arachis hypogaea HOM05D004604 ORTHO05D005744 3.2e-170 602.8 565 56.5
Migut.F01373 Erythranthe guttata HOM05D004604 ORTHO05D005744 5.4e-170 602.1 627 50.4
Sabra08G0049200 Salix brachista HOM05D004604 ORTHO05D005744 7.1e-170 601.7 579 57.0
Migut.F01374 Erythranthe guttata HOM05D004604 ORTHO05D005744 6.0e-169 598.6 627 51.0
Sp3g09520 Schrenkiella parvula HOM05D004604 ORTHO05D005744 6.0e-169 598.6 623 53.1
AL6G15600 Arabidopsis lyrata HOM05D004604 ORTHO05D005744 3.0e-168 596.3 627 51.2
C09p71140 Brassica napus HOM05D004604 ORTHO05D005744 1.1e-167 594.3 626 51.4
BolC9t59876H Brassica oleracea HOM05D004604 ORTHO05D005744 4.3e-167 592.4 626 51.3
BcaB06g25636 Brassica carinata HOM05D004604 ORTHO05D005744 9.6e-167 591.3 626 52.2
BcaC05g29392 Brassica carinata HOM05D004604 ORTHO05D005744 1.3e-166 590.9 623 52.0
C05p56850 Brassica napus HOM05D004604 ORTHO05D005744 1.3e-166 590.9 623 52.0
AL3G22760 Arabidopsis lyrata HOM05D004604 ORTHO05D005744 2.8e-166 589.7 627 51.8
BolC5t34349H Brassica oleracea HOM05D004604 ORTHO05D005744 3.6e-166 589.3 623 51.8
A05p38060 Brassica napus HOM05D004604 ORTHO05D005744 6.2e-166 588.6 624 52.1
BraA05t22598Z Brassica rapa HOM05D004604 ORTHO05D005744 6.2e-166 588.6 624 52.1
AT5G05700 Arabidopsis thaliana HOM05D004604 ORTHO05D005744 1.1e-165 587.8 644 50.0
A10p30660 Brassica napus HOM05D004604 ORTHO05D005744 1.4e-165 587.4 624 51.3
Aa31LG11G6730 Aethionema arabicum HOM05D004604 ORTHO05D005744 1.8e-165 587.0 623 51.0
MBI05_g34496_MAGBIO Magnolia biondii HOM05D004604 ORTHO05D005744 2.4e-165 586.6 517 59.0
CARHR085800 Cardamine hirsuta HOM05D004604 ORTHO05D005744 9.0e-165 584.7 623 52.8
Cpa.g.sc19.187 Carica papaya HOM05D004604 ORTHO05D005744 9.9e-164 581.3 536 60.1
vmacro06977 Vaccinium macrocarpon HOM05D004604 ORTHO05D005744 2.9e-163 579.7 626 52.6
MSTRG.213 Avicennia marina HOM05D004604 ORTHO05D005744 4.9e-163 578.9 581 54.2
Hund15948 Selenicereus undatus HOM05D004604 ORTHO05D005744 1.1e-162 577.8 624 50.6
BraA10t45107Z Brassica rapa HOM05D004604 ORTHO05D005744 1.6e-161 573.9 662 49.8
Eucgr.J00232 Eucalyptus grandis HOM05D004604 ORTHO05D005744 2.1e-161 573.5 564 54.4
DCAR_028567 Daucus carota HOM05D004604 ORTHO05D005744 2.3e-160 570.1 593 52.3
Gohir.D10G247400 Gossypium hirsutum HOM05D004604 ORTHO05D005744 1.9e-159 567.0 517 58.2
ATR0618G256 Amborella trichopoda HOM05D004604 ORTHO05D005744 5.6e-159 565.5 651 50.1
Cpa.g.sc19.188 Carica papaya HOM05D004604 ORTHO05D005744 1.3e-158 564.3 477 61.2
BcaC06g32278 Brassica carinata HOM05D004604 ORTHO05D005744 4.8e-158 562.4 625 49.6
CARHR207580 Cardamine hirsuta HOM05D004604 ORTHO05D005744 4.5e-156 555.8 610 50.0
Sed0013753 Sechium edule HOM05D004604 ORTHO05D005744 3.8e-155 552.7 475 58.7
Os05g0446800 Oryza sativa ssp. japonica HOM05D004604 ORTHO05D005744 6.4e-155 552.0 643 49.9
unitig_62.g23928 Utricularia gibba HOM05D004604 ORTHO05D005744 5.5e-154 548.9 635 48.3
AUR62022867 Chenopodium quinoa HOM05D004604 ORTHO05D005744 1.0e-152 544.7 583 51.6
Oeu048694.1 Olea europaea HOM05D004604 ORTHO05D005744 1.1e-151 541.2 479 56.8
Carub.0006s0459 Capsella rubella HOM05D004604 ORTHO05D005744 1.5e-151 540.8 593 49.7
Zm00001eb348230 Zea mays HOM05D004604 ORTHO05D005744 1.1e-146 524.6 517 55.7
Aa31LG3G4550 Aethionema arabicum HOM05D004604 ORTHO05D005744 1.4e-146 524.2 678 45.7
Peaxi162Scf01208g00144 Petunia axillaris HOM05D004604 ORTHO05D005744 1.2e-145 521.2 531 53.5
CDE03G0502 Ceratophyllum demersum HOM05D004604 ORTHO05D005744 3.3e-143 513.1 547 51.2
SEGI_40640 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 2.6e-140 503.4 629 47.5
Actinidia29693 Actinidia chinensis HOM05D004604 ORTHO05D005744 3.2e-138 496.5 622 45.3
Sc11g0007180 Simmondsia chinensis HOM05D004604 ORTHO05D005744 1.8e-136 490.7 532 51.9
Eucgr.J00227 Eucalyptus grandis HOM05D004604 ORTHO05D005744 2.7e-129 466.8 420 58.1
COL.COLO4_25696 Corchorus olitorius HOM05D004604 ORTHO05D005744 9.1e-125 451.8 625 45.8
Mapoly0067s0057 Marchantia polymorpha HOM05D004604 ORTHO05D005744 1.7e-123 447.6 622 43.6
HanXRQChr06g0172261 Helianthus annuus HOM05D004604 ORTHO05D005744 1.3e-118 431.4 487 49.9
AT3G11240 Arabidopsis thaliana HOM05D004604 ORTHO05D005744 2.8e-118 430.3 478 50.4
AagrBONN_evm.TU.Sc2ySwM_117.2751 Anthoceros agrestis HOM05D004604 ORTHO05D005744 1.3e-115 421.4 630 41.3
Pp3c3_24950 Physcomitrium patens HOM05D004604 ORTHO05D005744 1.1e-114 418.3 686 38.8
SEGI_28443 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 8.0e-113 412.1 470 49.4
SEGI_33236 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 8.0e-113 412.1 470 49.4
AUR62012235 Chenopodium quinoa HOM05D004604 ORTHO05D005744 3.3e-111 406.8 552 45.5
Thhalv10013820m.g Eutrema salsugineum HOM05D004604 ORTHO05D005744 1.9e-106 391.0 381 53.0
Actinidia33931 Actinidia chinensis HOM05D004604 ORTHO05D005744 8.0e-105 385.6 622 40.5
SMO118G0549 Selaginella moellendorffii HOM05D004604 ORTHO05D005744 8.3e-102 375.6 514 44.9
PRCOL_00002395 Prasinoderma coloniale HOM05D004604 ORTHO05D005744 1.3e-75 288.5 550 36.0
CBR_g49483 Chara braunii HOM05D004604 ORTHO05D005744 7.3e-74 282.7 510 35.9
arahy.Tifrunner.gnm1.ann1.3RRJ97 Arachis hypogaea HOM05D004604 ORTHO05D005744 6.8e-64 249.6 364 42.6
HPP92_018034 Vanilla planifolia HOM05D004604 ORTHO05D005744 1.7e-59 235.0 278 50.0
MCO15G553 Micromonas commoda HOM05D004604 ORTHO05D005744 1.3e-51 208.8 440 30.5
Cre13.g580600 Chlamydomonas reinhardtii HOM05D004604 ORTHO05D005744 1.4e-48 198.7 211 46.4
PSO339G5386 Papaver somniferum HOM05D004604 ORTHO05D005744 2.0e-39 168.3 133 60.9
Cfa022588 Carpinus fangiana HOM05D004604 ORTHO05D005744 1.3e-25 122.5 185 35.7
Peaxi162Scf01208g00156 Petunia axillaris HOM05D004604 ORTHO05D005744 3.0e-19 101.3 75 64.0
HPP92_018033 Vanilla planifolia HOM05D004604 ORTHO05D005744 4.3e-18 97.4 159 42.8
Oeu025172.2 Olea europaea HOM05D004604 ORTHO05D005744 6.5e-14 83.6 127 41.7
CBR_g49485 Chara braunii HOM05D000019 ORTHO05D000048 2.0e-07 62.0 39 69.2
CDE04G1491 Ceratophyllum demersum HOM05D004604 ORTHO05D005744 1.3e-06 59.3 49 55.1


User provided reference genes

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