Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G0825 Cannabis sativa HOM05D007598 ORTHO05D009632 5.7e-38 160.6 92 100.0
Aa31LG10G6810 Aethionema arabicum HOM05D007598 ORTHO05D009632 3.7e-21 104.8 63 79.4
Rhsim02G0159000 Rhododendron simsii HOM05D007598 ORTHO05D009632 8.3e-21 103.6 95 57.9
ClCG01G024670 Citrullus lanatus HOM05D007598 ORTHO05D009632 1.1e-20 103.2 91 63.7
BcaB06g28784 Brassica carinata HOM05D007598 ORTHO05D009632 2.4e-20 102.1 83 62.7
Prupe.4G081500 Prunus persica HOM05D007598 ORTHO05D009632 4.1e-20 101.3 92 62.0
A04p26490 Brassica napus HOM05D007598 ORTHO05D009632 5.4e-20 100.9 84 63.1
C04p63910 Brassica napus HOM05D007598 ORTHO05D009632 5.4e-20 100.9 84 63.1
BolC4t27858H Brassica oleracea HOM05D007598 ORTHO05D009632 5.4e-20 100.9 84 63.1
BraA04t18153Z Brassica rapa HOM05D007598 ORTHO05D009632 5.4e-20 100.9 84 63.1
CiPaw.10G091200 Carya illinoinensis HOM05D007598 ORTHO05D009632 2.0e-19 99.0 93 63.4
PGSC0003DMG400021093 Solanum tuberosum HOM05D007598 ORTHO05D009632 2.0e-19 99.0 92 58.7
MELO3C007128.2 Cucumis melo HOM05D007598 ORTHO05D009632 2.7e-19 98.6 92 62.0
Manes.17G070801 Manihot esculenta HOM05D007598 ORTHO05D009632 2.7e-19 98.6 85 61.2
Actinidia39580 Actinidia chinensis HOM05D007598 ORTHO05D009632 3.5e-19 98.2 91 58.2
Thhalv10017600m.g Eutrema salsugineum HOM05D007598 ORTHO05D009632 3.5e-19 98.2 83 61.4
AUR62002748 Chenopodium quinoa HOM05D007598 ORTHO05D009632 4.5e-19 97.8 60 75.0
Sp4g16850 Schrenkiella parvula HOM05D007598 ORTHO05D009632 4.5e-19 97.8 83 59.0
Actinidia07703 Actinidia chinensis HOM05D007598 ORTHO05D009632 5.9e-19 97.4 92 56.5
AUR62030196 Chenopodium quinoa HOM05D007598 ORTHO05D009632 5.9e-19 97.4 60 75.0
CsaV3_6G051780 Cucumis sativus L. HOM05D007598 ORTHO05D009632 5.9e-19 97.4 92 60.9
MD10G1261400 Malus domestica HOM05D007598 ORTHO05D009632 5.9e-19 97.4 92 60.9
Nitab4.5_0006887g0010 Nicotiana tabacum HOM05D007598 ORTHO05D009632 5.9e-19 97.4 60 78.3
AT2G34585 Arabidopsis thaliana HOM05D007598 ORTHO05D009632 7.7e-19 97.1 61 73.8
Nitab4.5_0000420g0040 Nicotiana tabacum HOM05D007598 ORTHO05D009632 7.7e-19 97.1 60 78.3
PGR042G1521 Punica granatum HOM05D007598 ORTHO05D009632 7.7e-19 97.1 60 81.7
Cc00_g10360 Coffea canephora HOM05D007598 ORTHO05D009632 1.0e-18 96.7 92 59.8
Thecc.06G149600 Theobroma cacao HOM05D007598 ORTHO05D009632 1.3e-18 96.3 92 60.9
AL4G30560 Arabidopsis lyrata HOM05D007598 ORTHO05D009632 2.2e-18 95.5 61 73.8
FAN11G3574 Fragaria x ananassa HOM05D007598 ORTHO05D009632 3.8e-18 94.7 84 61.9
MD05G1283100 Malus domestica HOM05D007598 ORTHO05D009632 3.8e-18 94.7 96 57.3
SalBow8G5536 Salvia bowleyana HOM05D007598 ORTHO05D009632 3.8e-18 94.7 60 75.0
Carub.0004s1626 Capsella rubella HOM05D007598 ORTHO05D009632 5.0e-18 94.4 63 71.4
Medtr2g019240 Medicago truncatula HOM05D007598 ORTHO05D009632 5.0e-18 94.4 60 76.7
FvH4_3g05470 Fragaria vesca HOM05D007598 ORTHO05D009632 6.5e-18 94.0 88 61.4
Phvul.006G165400 Phaseolus vulgaris HOM05D007598 ORTHO05D009632 6.5e-18 94.0 60 78.3
Cfa000936 Carpinus fangiana HOM05D007598 ORTHO05D009632 8.5e-18 93.6 92 58.7
DCAR_027909 Daucus carota HOM05D007598 ORTHO05D009632 8.5e-18 93.6 59 72.9
Sopen02g019560 Solanum pennellii HOM05D007598 ORTHO05D009632 1.1e-17 93.2 92 56.5
QL05p057697 Quercus lobata HOM05D007598 ORTHO05D009632 1.5e-17 92.8 60 75.0
Solyc02g070470.1 Solanum lycopersicum HOM05D007598 ORTHO05D009632 1.5e-17 92.8 92 56.5
CARHR128680 Cardamine hirsuta HOM05D007598 ORTHO05D009632 1.9e-17 92.4 62 69.4
THA.LOC104820651 Tarenaya hassleriana HOM05D007598 ORTHO05D009632 1.9e-17 92.4 92 56.5
arahy.Tifrunner.gnm1.ann1.A3G0A3 Arachis hypogaea HOM05D007598 ORTHO05D009632 2.5e-17 92.0 92 55.4
CAN.G702.32 Capsicum annuum HOM05D007598 ORTHO05D009632 2.5e-17 92.0 60 73.3
Dinv32243 Davidia involucrata HOM05D007598 ORTHO05D009632 2.5e-17 92.0 82 58.5
Sed0007826 Sechium edule HOM05D007598 ORTHO05D009632 2.5e-17 92.0 60 78.3
Cpa.g.sc170.27 Carica papaya HOM05D007598 ORTHO05D009632 3.2e-17 91.7 92 57.6
FAN16G2639 Fragaria x ananassa HOM05D007598 ORTHO05D009632 4.2e-17 91.3 77 62.3
Psat1g188680 Pisum sativum HOM05D007598 ORTHO05D009632 4.2e-17 91.3 83 59.0
Gohir.D10G042400 Gossypium hirsutum HOM05D007598 ORTHO05D009632 5.5e-17 90.9 60 75.0
CSS0006536 Camellia sinensis var. sinensis HOM05D007598 ORTHO05D009632 7.2e-17 90.5 92 57.6
CSS0035986 Camellia sinensis var. sinensis HOM05D007598 ORTHO05D009632 7.2e-17 90.5 92 58.7
FAN21G2813 Fragaria x ananassa HOM05D007598 ORTHO05D009632 7.2e-17 90.5 75 64.0
Glyma.15G093500 Glycine max HOM05D007598 ORTHO05D009632 7.2e-17 90.5 92 55.4
RcHm_v2.0_Chr5g0014281 Rosa chinensis HOM05D007598 ORTHO05D009632 7.2e-17 90.5 89 57.3
Sabra11G0066800 Salix brachista HOM05D007598 ORTHO05D009632 7.2e-17 90.5 96 56.2
Atru.chr10.1775 Acer truncatum HOM05D007598 ORTHO05D009632 9.5e-17 90.1 88 58.0
Ah.14g086510 Amaranthus hybridus HOM05D007598 ORTHO05D009632 9.5e-17 90.1 48 83.3
arahy.Tifrunner.gnm1.ann1.KTXA2U Arachis hypogaea HOM05D007598 ORTHO05D009632 9.5e-17 90.1 92 54.3
EL10Ac8g19673 Beta vulgaris HOM05D007598 ORTHO05D009632 9.5e-17 90.1 60 71.7
Nn3g20182 Nelumbo nucifera HOM05D007598 ORTHO05D009632 9.5e-17 90.1 92 55.4
Lj6g0001552 Lotus japonicus HOM05D007598 ORTHO05D009632 1.2e-16 89.7 92 55.4
Ciclev10017916m.g Citrus clementina HOM05D007598 ORTHO05D009632 1.6e-16 89.4 60 73.3
Migut.M01992 Erythranthe guttata HOM05D007598 ORTHO05D009632 1.6e-16 89.4 60 70.0
Potri.011G084300 Populus trichocarpa HOM05D007598 ORTHO05D009632 1.6e-16 89.4 50 82.0
TWI53G0871 Tripterygium wilfordii HOM05D007598 ORTHO05D009632 1.6e-16 89.4 92 58.7
Aqoxy7G00246 Aquilegia oxysepala HOM05D007598 ORTHO05D009632 2.1e-16 89.0 60 71.7
Migut.M00903 Erythranthe guttata HOM05D007598 ORTHO05D009632 2.8e-16 88.6 60 70.0
FAN25G0892 Fragaria x ananassa HOM05D007598 ORTHO05D009632 2.8e-16 88.6 48 85.4
Glyma.13G218700 Glycine max HOM05D007598 ORTHO05D009632 2.8e-16 88.6 60 71.7
Duzib235G0096 Durio zibethinus HOM05D007598 ORTHO05D009632 3.6e-16 88.2 89 58.4
Ca_00537_v3 Cicer arietinum L. HOM05D007598 ORTHO05D009632 4.7e-16 87.8 60 70.0
HanXRQChr15g0480881 Helianthus annuus HOM05D007598 ORTHO05D009632 6.1e-16 87.4 50 78.0
Nitab4.5_0002744g0030 Nicotiana tabacum HOM05D007598 ORTHO05D009632 6.1e-16 87.4 92 54.3
HanXRQChr04g0114301 Helianthus annuus HOM05D007598 ORTHO05D009632 8.0e-16 87.0 50 76.0
COL.COLO4_31062 Corchorus olitorius HOM05D007598 ORTHO05D009632 1.0e-15 86.7 46 87.0
Lalb_Chr20g0117881 Lupinus albus HOM05D007598 ORTHO05D009632 1.0e-15 86.7 83 56.6
PSO541G2526 Papaver somniferum HOM05D007598 ORTHO05D009632 1.0e-15 86.7 88 53.4
Sc05g0006160 Simmondsia chinensis HOM05D007598 ORTHO05D009632 1.8e-15 85.9 48 77.1
Lsat_1_v5_gn_7_28481 Lactuca sativa HOM05D007598 ORTHO05D009632 2.3e-15 85.5 50 76.0
PGSC0003DMG400012092 Solanum tuberosum HOM05D007598 ORTHO05D009632 3.0e-15 85.1 52 75.0
MBI02_g15148_MAGBIO Magnolia biondii HOM05D007598 ORTHO05D009632 4.0e-15 84.7 60 66.7
TAR626G0451 Trochodendron aralioides HOM05D007598 ORTHO05D009632 5.2e-15 84.3 60 66.7
unitig_749.g13736 Utricularia gibba HOM05D007598 ORTHO05D009632 5.2e-15 84.3 49 77.6
Os07g0154300 Oryza sativa ssp. japonica HOM05D007598 ORTHO05D009632 1.2e-14 83.2 60 66.7
ECA236G0778 Erigeron canadensis HOM05D007598 ORTHO05D009632 2.0e-14 82.4 46 78.3
HPP92_000988 Vanilla planifolia HOM05D007598 ORTHO05D009632 3.4e-14 81.6 47 78.7
Rhsim13G0114100 Rhododendron simsii HOM05D007598 ORTHO05D009632 3.7e-13 78.2 54 63.0
ATR1098G093 Amborella trichopoda HOM05D007598 ORTHO05D009632 4.9e-13 77.8 50 70.0
SEGI_36626 Sequoiadendron giganteum HOM05D007598 ORTHO05D009632 4.9e-13 77.8 48 70.8
Zm00001eb117510 Zea mays HOM05D007598 ORTHO05D009632 4.9e-13 77.8 47 74.5
Mapoly0055s0099 Marchantia polymorpha HOM05D007598 ORTHO05D009632 1.2e-11 73.2 49 67.3
Pp3c14_11250 Physcomitrium patens HOM05D007598 ORTHO05D009632 4.3e-09 64.7 59 50.8
Actinidia16706 Actinidia chinensis HOM05D000667 ORTHO05D004096 1.6e-08 62.8 71 49.3
SEGI_00564 Sequoiadendron giganteum HOM05D007598 ORTHO05D009632 4.7e-08 61.2 54 48.1
Pp3c10_22390 Physcomitrium patens HOM05D007598 ORTHO05D009632 5.7e-06 54.3 45 53.3


User provided reference genes

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