Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G0798 Cannabis sativa HOM05D007752 ORTHO05D009994 6.3e-176 621.3 495 100.0
Prupe.6G293600 Prunus persica HOM05D007752 ORTHO05D009994 4.9e-35 153.3 471 60.3
Haze_21175 Corylus avellana HOM05D007752 ORTHO05D009994 8.3e-35 152.5 478 51.5
QL07p032115 Quercus lobata HOM05D007752 ORTHO05D009994 1.2e-33 148.7 511 51.9
Sabra04G0153400 Salix brachista HOM05D007752 ORTHO05D009994 6.0e-33 146.4 447 58.8
Cfa017034 Carpinus fangiana HOM05D007752 ORTHO05D009994 2.3e-32 144.4 458 54.1
CiPaw.10G164800 Carya illinoinensis HOM05D007752 ORTHO05D009994 4.3e-31 140.2 455 48.6
MD04G1174700 Malus domestica HOM05D007752 ORTHO05D009994 4.3e-31 140.2 503 53.7
CSS0006720 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 1.4e-29 135.2 454 48.5
Ciclev10013314m.g Citrus clementina HOM05D007752 ORTHO05D009994 3.5e-25 120.6 443 56.0
Rhsim04G0121800 Rhododendron simsii HOM05D007752 ORTHO05D009994 1.7e-24 118.2 434 53.0
PGR031G1793 Punica granatum HOM05D007752 ORTHO05D009994 2.3e-24 117.9 511 47.0
FvH4_6g09870 Fragaria vesca HOM05D007752 ORTHO05D009994 3.3e-23 114.0 507 51.7
FAN14G1029 Fragaria x ananassa HOM05D007752 ORTHO05D009994 3.3e-23 114.0 439 56.0
Potri.016G136700 Populus trichocarpa HOM05D007752 ORTHO05D009994 3.3e-23 114.0 505 51.9
CSS0000350 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 4.3e-23 113.6 454 46.9
FAN02G1651 Fragaria x ananassa HOM05D007752 ORTHO05D009994 3.6e-22 110.5 110 46.4
RcHm_v2.0_Chr3g0460471 Rosa chinensis HOM05D007752 ORTHO05D009994 4.7e-22 110.2 466 54.3
TAR633G0335 Trochodendron aralioides HOM05D007752 ORTHO05D009994 4.7e-22 110.2 142 41.5
Ca_07763_v3 Cicer arietinum L. HOM05D007752 ORTHO05D009994 6.2e-22 109.8 392 58.9
TWI77G0759 Tripterygium wilfordii HOM05D007752 ORTHO05D009994 4.0e-21 107.1 153 39.2
COL.COLO4_06481 Corchorus olitorius HOM05D007752 ORTHO05D000248 6.9e-21 106.3 437 50.3
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 6.9e-21 106.3 110 45.5
Hma1.2p1_0174F.1_g076820 Hydrangea macrophylla HOM05D007752 ORTHO05D009994 1.5e-20 105.1 122 44.3
Actinidia29032 Actinidia chinensis HOM05D007752 ORTHO05D009994 2.0e-20 104.8 140 41.4
Eucgr.A00738 Eucalyptus grandis HOM05D007752 ORTHO05D009994 2.6e-20 104.4 401 50.9
Ah.08g209310 Amaranthus hybridus HOM05D007752 ORTHO05D009994 7.6e-20 102.8 491 51.1
Dinv16979 Davidia involucrata HOM05D007752 ORTHO05D009994 7.6e-20 102.8 116 42.2
Duzib151G0981 Durio zibethinus HOM05D007752 ORTHO05D009994 7.6e-20 102.8 108 44.4
Lj3P941T40 Lonicera japonica HOM05D007752 ORTHO05D009994 1.7e-19 101.7 144 38.2
ClCG10G022730 Citrullus lanatus HOM05D007752 ORTHO05D009994 4.9e-19 100.1 150 49.3
Sed0005875 Sechium edule HOM05D007752 ORTHO05D009994 1.4e-18 98.6 152 37.5
Lsat_1_v5_gn_5_152320 Lactuca sativa HOM05D007752 ORTHO05D009994 1.2e-17 95.5 471 41.0
Lj1g0026088 Lotus japonicus HOM05D007752 ORTHO05D009994 2.1e-17 94.7 168 38.1
AUR62029765 Chenopodium quinoa HOM05D007752 ORTHO05D009994 2.7e-17 94.4 409 54.0
PSO170G5102 Papaver somniferum HOM05D007752 ORTHO05D009994 2.7e-17 94.4 152 33.6
Gohir.A02G003300 Gossypium hirsutum HOM05D007752 ORTHO05D009994 3.5e-17 94.0 151 34.4
AUR62006417 Chenopodium quinoa HOM05D007752 ORTHO05D000248 6.0e-17 93.2 144 39.6
Thecc.04G151600 Theobroma cacao HOM05D007752 ORTHO05D009994 1.7e-16 91.7 109 38.5
SGA_v2.0_scaffold85G26614 Striga asiatica HOM05D007752 ORTHO05D009994 2.3e-16 91.3 133 35.3
PSO017G1004 Papaver somniferum HOM05D007752 ORTHO05D009994 3.0e-16 90.9 152 32.9
Migut.J00038 Erythranthe guttata HOM05D007752 ORTHO05D009994 1.1e-15 89.0 115 41.7
Gorai.005G004200 Gossypium raimondii HOM05D007752 ORTHO05D009994 1.9e-15 88.2 149 42.3
EL10Ac7g17101 Beta vulgaris HOM05D007752 ORTHO05D000248 4.3e-15 87.0 94 45.7
Psat3g118880 Pisum sativum HOM05D007752 ORTHO05D009994 7.3e-15 86.3 182 35.2
HanXRQChr01g0000111 Helianthus annuus HOM05D007752 ORTHO05D009994 1.6e-14 85.1 453 48.6
MBI03_g22789_MAGBIO Magnolia biondii HOM05D007752 ORTHO05D009994 8.1e-14 82.8 94 42.6
TPR.G14113 Trifolium pratense HOM05D007752 ORTHO05D009994 1.8e-13 81.6 111 40.5
Medtr7g073260 Medicago truncatula HOM05D007752 ORTHO05D009994 2.4e-13 81.3 177 31.1
Glyma.09G274800 Glycine max HOM05D007752 ORTHO05D009994 5.3e-13 80.1 110 39.1
SalBow1G4712 Salvia bowleyana HOM05D007752 ORTHO05D009994 5.3e-13 80.1 150 33.3
Phvul.008G082800 Phaseolus vulgaris HOM05D007752 ORTHO05D009994 9.0e-13 79.3 167 31.7
VMungo1383G3403 Vigna mungo HOM05D007752 ORTHO05D009994 9.0e-13 79.3 168 31.0
Nn2g10299 Nelumbo nucifera HOM05D007752 ORTHO05D009994 2.0e-12 78.2 107 40.2
Oeu057981.1 Olea europaea HOM05D007752 ORTHO05D009994 2.0e-12 78.2 161 34.2
SalBow1G2062 Salvia bowleyana HOM05D007752 ORTHO05D009994 2.0e-12 78.2 144 32.6
Sc20g0006950 Simmondsia chinensis HOM05D007752 ORTHO05D009994 5.8e-12 76.6 142 30.3
Gohir.D02G003700 Gossypium hirsutum HOM05D007752 ORTHO05D009994 7.6e-12 76.3 137 35.0
SalBow8G2716 Salvia bowleyana HOM05D007752 ORTHO05D009994 9.9e-12 75.9 154 30.5
SalBow5G4979 Salvia bowleyana HOM05D007752 ORTHO05D009994 2.2e-11 74.7 148 32.4
Nitab4.5_0004433g0030 Nicotiana tabacum HOM05D007752 ORTHO05D009994 1.9e-10 71.6 107 38.3
Sc20g0006960 Simmondsia chinensis HOM05D007752 ORTHO05D009994 3.2e-10 70.9 68 50.0
Solyc09g042250.2 Solanum lycopersicum HOM05D007752 ORTHO05D009994 1.6e-09 68.6 76 43.4
Sopen09g015390 Solanum pennellii HOM05D007752 ORTHO05D009994 1.6e-09 68.6 76 43.4
Eucgr.A00736 Eucalyptus grandis HOM05D007752 ORTHO05D009994 2.7e-09 67.8 58 50.0
Manes.08G171200 Manihot esculenta HOM05D007752 ORTHO05D009994 2.7e-09 67.8 143 44.1
Aqoxy4G02425 Aquilegia oxysepala HOM05D007752 ORTHO05D009994 4.6e-09 67.0 68 50.0
HPP92_024978 Vanilla planifolia HOM05D007752 ORTHO05D009994 7.9e-09 66.2 81 40.7
Cpa.g.sc86.57 Carica papaya HOM05D007752 ORTHO05D009994 1.0e-08 65.9 145 42.8
CDE06G1380 Ceratophyllum demersum HOM05D007752 ORTHO05D009994 1.8e-08 65.1 93 39.8
MELO3C009103.2 Cucumis melo HOM05D007752 ORTHO05D009994 2.3e-08 64.7 81 43.2
Peaxi162Scf00732g00031 Petunia axillaris HOM05D007752 ORTHO05D000248 2.3e-08 64.7 95 36.8
THA.LOC104807022 Tarenaya hassleriana HOM05D007752 ORTHO05D009994 8.7e-08 62.8 137 28.5
VMungo0251G1651 Vigna mungo HOM05D007752 ORTHO05D009994 3.3e-07 60.8 90 32.2
Peaxi162Scf00141g00093 Petunia axillaris HOM05D007752 ORTHO05D009994 4.3e-07 60.5 75 42.7
SEGI_05799 Sequoiadendron giganteum HOM05D005833 ORTHO05D008135 4.3e-07 60.5 63 42.9
VMungo0720G0765 Vigna mungo HOM05D007752 ORTHO05D009994 4.3e-07 60.5 71 42.3
ECA248G3142 Erigeron canadensis HOM05D007752 ORTHO05D009994 4.8e-06 57.0 142 28.2
Manes.08G089400 Manihot esculenta HOM05D000104 ORTHO05D009920 4.8e-06 57.0 74 39.2


User provided reference genes

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