Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G0781 Cannabis sativa HOM05D007312 ORTHO05D009209 3.7e-64 248.1 124 100.0
TWI63G0684 Tripterygium wilfordii HOM05D007312 ORTHO05D009209 1.6e-51 206.1 124 82.3
PGR042G3076 Punica granatum HOM05D007312 ORTHO05D009209 6.7e-50 200.7 126 80.2
MD05G1250400 Malus domestica HOM05D007312 ORTHO05D009209 8.7e-50 200.3 129 79.1
Duzib052G0161 Durio zibethinus HOM05D007312 ORTHO05D009209 1.1e-49 199.9 122 82.8
Gohir.A12G046700 Gossypium hirsutum HOM05D007312 ORTHO05D009209 4.3e-49 198.0 125 80.8
Actinidia22408 Actinidia chinensis HOM05D007312 ORTHO05D009209 1.6e-48 196.1 124 78.2
Potri.012G124500 Populus trichocarpa HOM05D007312 ORTHO05D009209 2.2e-48 195.7 126 77.8
QL11p016282 Quercus lobata HOM05D007312 ORTHO05D009209 2.8e-48 195.3 125 77.6
Cc09_g06000 Coffea canephora HOM05D007312 ORTHO05D009209 3.7e-48 194.9 124 79.0
CiPaw.09G076400 Carya illinoinensis HOM05D007312 ORTHO05D009209 4.8e-48 194.5 126 76.2
Ciclev10017175m.g Citrus clementina HOM05D007312 ORTHO05D009209 4.8e-48 194.5 128 76.6
Atru.chr10.560 Acer truncatum HOM05D007312 ORTHO05D009209 8.2e-48 193.7 126 77.0
Hma1.2p1_1005F.1_g246920 Hydrangea macrophylla HOM05D007312 ORTHO05D009209 8.2e-48 193.7 131 75.6
Medtr4g084180 Medicago truncatula HOM05D007312 ORTHO05D009209 8.2e-48 193.7 126 77.0
AL1G49340 Arabidopsis lyrata HOM05D007312 ORTHO05D009209 1.1e-47 193.4 126 76.2
AT1G31170 Arabidopsis thaliana HOM05D007312 ORTHO05D009209 1.4e-47 193.0 126 75.4
Manes.16G055800 Manihot esculenta HOM05D007312 ORTHO05D009209 1.4e-47 193.0 127 77.2
TPR.G38271 Trifolium pratense HOM05D007312 ORTHO05D009209 1.8e-47 192.6 125 77.6
CSS0025621 Camellia sinensis var. sinensis HOM05D007312 ORTHO05D009209 2.4e-47 192.2 128 75.0
BcaC07g37774 Brassica carinata HOM05D007312 ORTHO05D009209 4.1e-47 191.4 123 75.6
Thhalv10009117m.g Eutrema salsugineum HOM05D007312 ORTHO05D009209 5.3e-47 191.0 126 73.8
MSTRG.7597 Avicennia marina HOM05D007312 ORTHO05D009209 6.9e-47 190.7 124 77.4
BcaB04g18176 Brassica carinata HOM05D007312 ORTHO05D009209 6.9e-47 190.7 125 76.8
Ca_18754_v3 Cicer arietinum L. HOM05D007312 ORTHO05D009209 6.9e-47 190.7 128 75.8
CARHR030640 Cardamine hirsuta HOM05D007312 ORTHO05D009209 9.0e-47 190.3 126 73.0
EL10Ac5g12681 Beta vulgaris HOM05D007312 ORTHO05D009209 1.2e-46 189.9 124 76.6
Nitab4.5_0007745g0050 Nicotiana tabacum HOM05D007312 ORTHO05D009209 1.2e-46 189.9 126 77.0
Carub.0001s2957 Capsella rubella HOM05D007312 ORTHO05D009209 1.5e-46 189.5 121 76.9
MELO3C021735.2 Cucumis melo HOM05D007312 ORTHO05D009209 1.5e-46 189.5 116 81.0
Glyma.20G019100 Glycine max HOM05D007312 ORTHO05D009209 4.5e-46 188.0 129 74.4
CsaV3_1G046220 Cucumis sativus L. HOM05D007312 ORTHO05D009209 5.9e-46 187.6 116 80.2
Sp1g26990 Schrenkiella parvula HOM05D007312 ORTHO05D009209 5.9e-46 187.6 123 74.0
ClCG01G009570 Citrullus lanatus HOM05D007312 ORTHO05D009209 7.7e-46 187.2 116 80.2
Sopen02g017880 Solanum pennellii HOM05D007312 ORTHO05D009209 1.0e-45 186.8 126 74.6
PGSC0003DMG400010438 Solanum tuberosum HOM05D007312 ORTHO05D009209 1.0e-45 186.8 126 74.6
TAR624G0630 Trochodendron aralioides HOM05D007312 ORTHO05D009209 1.0e-45 186.8 124 73.4
VMungo0251G1106 Vigna mungo HOM05D007312 ORTHO05D009209 2.2e-45 185.7 129 70.5
Nitab4.5_0001288g0230 Nicotiana tabacum HOM05D007312 ORTHO05D009209 2.9e-45 185.3 124 75.0
GSVIVG01012104001 Vitis vinifera HOM05D007312 ORTHO05D009209 2.9e-45 185.3 127 78.0
ECA234G3951 Erigeron canadensis HOM05D007312 ORTHO05D009209 3.8e-45 184.9 131 73.3
Ah.01g020500 Amaranthus hybridus HOM05D007312 ORTHO05D009209 5.0e-45 184.5 119 78.2
Sabra12G0094300 Salix brachista HOM05D007312 ORTHO05D009209 5.0e-45 184.5 121 76.9
HanXRQChr12g0381571 Helianthus annuus HOM05D007312 ORTHO05D009209 6.5e-45 184.1 130 72.3
RcHm_v2.0_Chr5g0020311 Rosa chinensis HOM05D007312 ORTHO05D009209 8.5e-45 183.7 129 71.3
Lj2A350T56 Lonicera japonica HOM05D007312 ORTHO05D009209 1.4e-44 183.0 118 76.3
Peaxi162Scf00149g00224 Petunia axillaris HOM05D007312 ORTHO05D009209 1.4e-44 183.0 124 74.2
Solyc02g068710.3 Solanum lycopersicum HOM05D007312 ORTHO05D009209 1.4e-44 183.0 126 73.8
Lj4g0021225 Lotus japonicus HOM05D007312 ORTHO05D009209 1.9e-44 182.6 129 72.1
Phvul.002G097300 Phaseolus vulgaris HOM05D007312 ORTHO05D009209 3.2e-44 181.8 129 69.0
BolC8t48163H Brassica oleracea HOM05D007312 ORTHO05D009209 4.2e-44 181.4 118 74.6
Lsat_1_v5_gn_3_106761 Lactuca sativa HOM05D007312 ORTHO05D009209 7.2e-44 180.6 122 77.0
Hund14701 Selenicereus undatus HOM05D007312 ORTHO05D009209 7.2e-44 180.6 122 74.6
AUR62010557 Chenopodium quinoa HOM05D007312 ORTHO05D009209 1.2e-43 179.9 120 77.5
A08p10710 Brassica napus HOM05D007312 ORTHO05D009209 4.6e-43 177.9 119 72.3
BraA08t33069Z Brassica rapa HOM05D007312 ORTHO05D009209 4.6e-43 177.9 119 72.3
RhsimUnG0109200 Rhododendron simsii HOM05D007312 ORTHO05D009209 4.6e-43 177.9 119 76.5
Lalb_Chr16g0385171 Lupinus albus HOM05D007312 ORTHO05D009209 6.1e-43 177.6 127 70.1
SGA_v2.0_scaffold298G47689 Striga asiatica HOM05D007312 ORTHO05D009209 1.0e-42 176.8 126 72.2
Rhsim13G0146500 Rhododendron simsii HOM05D007312 ORTHO05D009209 3.0e-42 175.3 119 75.6
MBI18_g11473_MAGBIO Magnolia biondii HOM05D007312 ORTHO05D009209 5.1e-42 174.5 115 73.0
Os06g0174300 Oryza sativa ssp. japonica HOM05D007312 ORTHO05D009209 5.1e-42 174.5 109 78.9
unitig_32.g10991 Utricularia gibba HOM05D000532 ORTHO05D009209 5.1e-42 174.5 98 81.6
FvH4_3g12430 Fragaria vesca HOM05D007312 ORTHO05D009209 6.7e-42 174.1 124 71.0
Zm00001eb375250 Zea mays HOM05D007312 ORTHO05D009209 8.8e-42 173.7 115 77.4
PSO541G3426 Papaver somniferum HOM05D007312 ORTHO05D009209 1.1e-41 173.3 117 71.8
Eucgr.E04250 Eucalyptus grandis HOM05D007312 ORTHO05D009209 1.5e-41 172.9 117 76.1
SalBow8G4543 Salvia bowleyana HOM05D007312 ORTHO05D009209 2.5e-41 172.2 120 71.7
AUR62017332 Chenopodium quinoa HOM05D007312 ORTHO05D009209 9.7e-41 170.2 120 74.2
THA.LOC104798553 Tarenaya hassleriana HOM05D007312 ORTHO05D009209 9.7e-41 170.2 129 68.2
Psat7g129800 Pisum sativum HOM05D007312 ORTHO05D009209 1.3e-40 169.9 116 75.0
Aa31LG2G15110 Aethionema arabicum HOM05D007312 ORTHO05D009209 1.7e-40 169.5 107 75.7
CDE02G1125 Ceratophyllum demersum HOM05D007312 ORTHO05D009209 6.3e-40 167.5 118 71.2
Migut.M01988 Erythranthe guttata HOM05D007312 ORTHO05D009209 8.2e-40 167.2 99 81.8
vmacro03527 Vaccinium macrocarpon HOM05D007312 ORTHO05D009209 1.1e-39 166.8 97 82.5
CAN.G149.9 Capsicum annuum HOM05D007312 ORTHO05D009209 1.4e-39 166.4 103 80.6
Aqoxy1G01718 Aquilegia oxysepala HOM05D007312 ORTHO05D009209 4.1e-39 164.9 140 64.3
arahy.Tifrunner.gnm1.ann1.FJ5394 Arachis hypogaea HOM05D007312 ORTHO05D009209 9.1e-39 163.7 89 88.8
arahy.Tifrunner.gnm1.ann1.XDA00H Arachis hypogaea HOM05D007312 ORTHO05D009209 9.1e-39 163.7 125 68.8
Haze_06075 Corylus avellana HOM05D007312 ORTHO05D009209 1.7e-37 159.5 121 66.1
HPP92_010212 Vanilla planifolia HOM05D007312 ORTHO05D009209 3.8e-37 158.3 113 69.9
Nn7g38246 Nelumbo nucifera HOM05D007312 ORTHO05D009209 6.5e-37 157.5 124 67.7
Pp3c7_15740 Physcomitrium patens HOM05D007312 ORTHO05D009209 2.7e-35 152.1 110 66.4
SMO145G0246 Selaginella moellendorffii HOM05D007312 ORTHO05D009209 6.7e-34 147.5 85 76.5
Mapoly0066s0018 Marchantia polymorpha HOM05D007312 ORTHO05D009209 1.8e-31 139.4 173 48.0
Cre17.g729950 Chlamydomonas reinhardtii HOM05D007312 ORTHO05D009209 2.6e-30 135.6 88 73.9
RcHm_v2.0_Chr2g0126261 Rosa chinensis HOM05D007312 ORTHO05D009209 1.7e-29 132.9 85 75.3
CBR_g4 Chara braunii HOM05D007312 ORTHO05D009209 1.5e-28 129.8 93 69.9
Dinv25919 Davidia involucrata HOM05D007312 ORTHO05D009209 1.0e-26 123.6 88 71.6
Prupe.4G113200 Prunus persica HOM05D007312 ORTHO05D009209 2.3e-26 122.5 95 68.4
HPP92_010191 Vanilla planifolia HOM05D007312 ORTHO05D009209 4.8e-24 114.8 118 56.8
Oeu056034.1 Olea europaea HOM05D007312 ORTHO05D009209 1.2e-22 110.2 86 65.1
FAN25G0614 Fragaria x ananassa HOM05D007312 ORTHO05D009209 5.5e-20 101.3 97 60.8
Cpa.g.sc5085.1 Carica papaya HOM05D007312 ORTHO05D009209 1.2e-19 100.1 76 65.8
Sc01g0008940 Simmondsia chinensis HOM05D007312 ORTHO05D009209 2.7e-19 99.0 79 63.3
Thecc.02G008700 Theobroma cacao HOM05D007312 ORTHO05D009209 3.6e-19 98.6 83 63.9
Gorai.008G048300 Gossypium raimondii HOM05D007312 ORTHO05D009209 1.0e-18 97.1 78 66.7
Gohir.D12G045700 Gossypium hirsutum HOM05D007312 ORTHO05D009209 4.0e-18 95.1 78 65.4
ATR0752G167 Amborella trichopoda HOM05D007312 ORTHO05D009209 1.7e-16 89.7 86 53.5
Sed0015339 Sechium edule HOM05D007312 ORTHO05D009209 4.8e-16 88.2 72 68.1
Lalb_Chr09g0328681 Lupinus albus HOM05D007312 ORTHO05D009209 3.1e-15 85.5 41 87.8
FAN21G0246 Fragaria x ananassa HOM05D007312 ORTHO05D009209 5.4e-15 84.7 84 54.8
FAN16G3369 Fragaria x ananassa HOM05D007312 ORTHO05D009209 1.6e-14 83.2 81 56.8
Sabra12G0063500 Salix brachista HOM05D007312 ORTHO05D009209 2.7e-14 82.4 52 76.9
COL.COLO4_17652 Corchorus olitorius HOM05D007312 ORTHO05D009209 1.7e-13 79.7 56 64.3
Potri.015G124601 Populus trichocarpa HOM05D007312 ORTHO05D009209 9.8e-09 63.9 42 69.0
Lalb_Chr09g0328671 Lupinus albus HOM05D007312 ORTHO05D009209 1.4e-07 60.1 93 41.9


User provided reference genes

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