Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G0732 Cannabis sativa HOM05D031271 ORTHO05D010564 1.5e-91 339.3 158 100.0
CANSAT21G1032 Cannabis sativa HOM05D031271 ORTHO05D000397 2.8e-85 318.5 158 93.0
CANSAT56G0081 Cannabis sativa HOM05D031271 ORTHO05D000397 1.1e-84 316.6 157 93.0
BolC4t27258H Brassica oleracea HOM05D000675 ORTHO05D020104 1.1e-12 77.4 144 34.7
A01p22900 Brassica napus HOM05D000675 ORTHO05D003044 2.7e-11 72.8 145 32.4
BraA01t02203Z Brassica rapa HOM05D000675 ORTHO05D003044 2.7e-11 72.8 145 32.4
BraA02t07854Z Brassica rapa HOM05D000675 ORTHO05D003044 2.7e-11 72.8 145 32.4
BcaC08g43027 Brassica carinata HOM05D000675 ORTHO05D003044 4.6e-11 72.0 155 29.7
BcaB05g22218 Brassica carinata HOM05D000977 ORTHO05D001094 5.1e-10 68.6 159 32.7
BcaB01g01752 Brassica carinata HOM05D000675 ORTHO05D003044 8.6e-10 67.8 151 29.1
BcaB06g29622 Brassica carinata HOM05D000977 ORTHO05D001094 1.1e-09 67.4 158 31.6
Oeu009393.1 Olea europaea HOM05D009665 ORTHO05D011335 1.5e-09 67.0 157 27.4
BraA04t17363Z Brassica rapa HOM05D000675 ORTHO05D003044 3.3e-09 65.9 143 30.8
BolC8t48131H Brassica oleracea HOM05D000675 ORTHO05D003044 5.6e-09 65.1 145 31.0
AL9U11170 Arabidopsis lyrata HOM05D000675 ORTHO05D000395 7.3e-09 64.7 152 34.2
BcaC05g27350 Brassica carinata HOM05D000977 ORTHO05D001094 1.2e-08 63.9 146 30.8
A05p23490 Brassica napus HOM05D000675 ORTHO05D000395 2.8e-08 62.8 143 29.4
BraA05t21216Z Brassica rapa HOM05D000675 ORTHO05D000395 2.8e-08 62.8 143 29.4
AL4G30840 Arabidopsis lyrata HOM05D000675 ORTHO05D000395 3.6e-08 62.4 137 27.7
BcaC06g35365 Brassica carinata HOM05D000977 ORTHO05D001094 3.6e-08 62.4 158 31.0
AL8G14210 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 6.2e-08 61.6 163 27.6
BcaB03g14367 Brassica carinata HOM05D000977 ORTHO05D001094 6.2e-08 61.6 158 31.0
TWI32G1169 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.1e-07 60.8 152 24.3
BcaB01g01025 Brassica carinata HOM05D000675 ORTHO05D000395 1.4e-07 60.5 146 28.8
BcaB06g27534 Brassica carinata HOM05D000675 ORTHO05D000395 1.8e-07 60.1 147 28.6
BcaC07g36913 Brassica carinata HOM05D000977 ORTHO05D001094 1.8e-07 60.1 157 31.8
BcaC02g10227 Brassica carinata HOM05D000977 ORTHO05D001094 2.3e-07 59.7 158 29.1
Thhalv10021955m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.3e-07 59.7 153 28.1
C04p10850 Brassica napus HOM05D000675 ORTHO05D020104 3.1e-07 59.3 103 35.9
Thhalv10011096m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 3.1e-07 59.3 153 28.1
AL4G19890 Arabidopsis lyrata HOM05D000675 ORTHO05D003044 4.0e-07 58.9 150 33.3
BcaB01g03290 Brassica carinata HOM05D000675 ORTHO05D003044 4.0e-07 58.9 127 27.6
BcaB01g01312 Brassica carinata HOM05D000675 ORTHO05D003044 5.2e-07 58.5 144 28.5
BcaC01g05607 Brassica carinata HOM05D000675 ORTHO05D000395 5.2e-07 58.5 146 29.5
BcaC02g10149 Brassica carinata HOM05D000977 ORTHO05D001094 5.2e-07 58.5 158 29.7
BcaC02g11836 Brassica carinata HOM05D000675 ORTHO05D003044 5.2e-07 58.5 97 38.1
BolC3t14837H Brassica oleracea HOM05D000675 ORTHO05D000395 5.2e-07 58.5 146 29.5
BcaC08g44724 Brassica carinata HOM05D000675 ORTHO05D000395 6.8e-07 58.2 146 28.8
BcaC09g49239 Brassica carinata HOM05D000675 ORTHO05D003044 6.8e-07 58.2 91 38.5
C06p22620 Brassica napus HOM05D000675 ORTHO05D013785 6.8e-07 58.2 146 28.8
BolC5t32181H Brassica oleracea HOM05D000977 ORTHO05D001094 6.8e-07 58.2 158 31.0
CANSAT56G3729 Cannabis sativa HOM05D008058 ORTHO05D010564 6.8e-07 58.2 163 25.2
Oeu030232.2 Olea europaea HOM05D008641 ORTHO05D000397 6.8e-07 58.2 86 37.2
CANSAT21G1969 Cannabis sativa HOM05D008058 ORTHO05D010564 8.9e-07 57.8 142 26.8
BcaB04g16995 Brassica carinata HOM05D000675 ORTHO05D003044 1.2e-06 57.4 140 29.3
BcaC06g36215 Brassica carinata HOM05D000977 ORTHO05D001094 1.2e-06 57.4 158 29.1
BcaB01g04897 Brassica carinata HOM05D000675 ORTHO05D000395 1.5e-06 57.0 144 27.8
CANSAT56G1475 Cannabis sativa HOM05D008058 ORTHO05D010564 2.0e-06 56.6 142 26.1
Oeu026437.1 Olea europaea HOM05D009665 ORTHO05D000397 2.0e-06 56.6 128 30.5
BcaC09g48718 Brassica carinata HOM05D000977 ORTHO05D001094 2.6e-06 56.2 141 32.6
BcaC09g49264 Brassica carinata HOM05D000675 ORTHO05D000395 2.6e-06 56.2 129 27.9
CANSAT64G2290 Cannabis sativa HOM05D008058 ORTHO05D010564 2.6e-06 56.2 150 24.0
Oeu053111.1 Olea europaea HOM05D008641 ORTHO05D000397 2.6e-06 56.2 150 24.7
BolC2t09930H Brassica oleracea HOM05D000675 ORTHO05D000395 3.4e-06 55.8 142 27.5
BcaB07g32139 Brassica carinata HOM05D000675 ORTHO05D000395 4.4e-06 55.5 146 26.7
BcaNung03743 Brassica carinata HOM05D000675 ORTHO05D000395 4.4e-06 55.5 146 28.1
A09p33960 Brassica napus HOM05D000675 ORTHO05D003044 4.4e-06 55.5 143 28.0
BolC5t30672H Brassica oleracea HOM05D000675 ORTHO05D000395 4.4e-06 55.5 143 26.6
BraA09t38942Z Brassica rapa HOM05D000675 ORTHO05D003044 4.4e-06 55.5 143 28.0
BcaC06g34451 Brassica carinata HOM05D000977 ORTHO05D001094 5.8e-06 55.1 163 30.1
CANSAT64G1886 Cannabis sativa HOM05D008058 ORTHO05D010564 5.8e-06 55.1 131 26.7
C06p15920 Brassica napus HOM05D001285 ORTHO05D000199 7.6e-06 54.7 152 28.3
BcaB07g33410 Brassica carinata HOM05D001285 ORTHO05D000199 9.9e-06 54.3 151 29.1
Carub.0007s3161 Capsella rubella HOM05D000977 ORTHO05D001094 9.9e-06 54.3 166 27.1
SpUn0365_0010 Schrenkiella parvula HOM05D011363 ORTHO05D003044 9.9e-06 54.3 145 26.2


User provided reference genes

Program Settings