Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G0692 Cannabis sativa HOM05D010396 ORTHO05D002765 2.3e-137 492.3 256 100.0
CANSAT54G0083 Cannabis sativa HOM05D010396 ORTHO05D000013 5.7e-120 434.5 280 83.9
CANSAT21G2439 Cannabis sativa HOM05D010396 ORTHO05D002765 1.2e-88 330.5 207 84.5
CANSAT25G2859 Cannabis sativa HOM05D010396 ORTHO05D002765 1.5e-72 276.9 136 99.3
CANSAT35G0400 Cannabis sativa HOM05D010396 ORTHO05D002765 4.9e-71 271.9 161 87.0
CANSAT35G0346 Cannabis sativa HOM05D010396 ORTHO05D002765 8.3e-71 271.2 141 94.3
CANSAT25G1832 Cannabis sativa HOM05D010396 ORTHO05D002765 1.2e-69 267.3 168 81.5
CANSAT11G2236 Cannabis sativa HOM05D010396 ORTHO05D002765 2.1e-69 266.5 157 86.6
CANSAT01G2097 Cannabis sativa HOM05D010396 ORTHO05D002765 3.3e-67 259.2 164 83.5
CANSAT64G1880 Cannabis sativa HOM05D010396 ORTHO05D002765 3.3e-67 259.2 165 80.6
CANSAT21G1820 Cannabis sativa HOM05D010396 ORTHO05D002765 4.0e-65 252.3 129 96.1
CANSAT80G0794 Cannabis sativa HOM05D010396 ORTHO05D002765 6.8e-65 251.5 129 96.1
CANSAT01G0081 Cannabis sativa HOM05D000017 ORTHO05D000013 2.4e-54 216.5 161 78.3
CANSAT64G1249 Cannabis sativa HOM05D010396 ORTHO05D002765 1.2e-50 204.1 106 94.3
CANSAT56G3361 Cannabis sativa HOM05D008401 ORTHO05D002765 1.2e-48 197.6 109 98.2
CANSAT78G0321 Cannabis sativa HOM05D010396 ORTHO05D002765 1.4e-46 190.7 250 44.4
CANSAT01G1220 Cannabis sativa HOM05D000017 ORTHO05D000013 1.9e-46 190.3 108 95.4
CANSAT11G1223 Cannabis sativa HOM05D000017 ORTHO05D000013 1.9e-46 190.3 108 95.4
CANSAT21G0992 Cannabis sativa HOM05D010396 ORTHO05D002765 2.5e-43 179.9 249 44.2
CANSAT78G0529 Cannabis sativa HOM05D010396 ORTHO05D002765 2.2e-39 166.8 251 42.2
CANSAT01G2679 Cannabis sativa HOM05D010396 ORTHO05D002765 4.0e-33 146.0 213 42.3
CANSAT25G3317 Cannabis sativa HOM05D010396 ORTHO05D002765 2.7e-29 133.3 186 43.0
CANSAT54G1361 Cannabis sativa HOM05D000017 ORTHO05D000013 2.3e-28 130.2 238 34.9
CANSAT64G2574 Cannabis sativa HOM05D010396 ORTHO05D002765 4.0e-25 119.4 108 50.9
CANSAT35G0979 Cannabis sativa HOM05D000017 ORTHO05D000013 9.0e-25 118.2 71 81.7
CANSAT54G2057 Cannabis sativa HOM05D000017 ORTHO05D000013 3.4e-24 116.3 58 96.6
CANSAT01G1096 Cannabis sativa HOM05D000017 ORTHO05D000013 1.7e-23 114.0 167 45.5
CANSAT25G0180 Cannabis sativa HOM05D000017 ORTHO05D000013 3.2e-22 109.8 247 32.0
CANSAT80G0351 Cannabis sativa HOM05D000017 ORTHO05D000013 4.6e-21 105.9 59 89.8
CANSAT35G1006 Cannabis sativa HOM05D000017 ORTHO05D000013 7.9e-21 105.1 52 96.2
CANSAT64G0409 Cannabis sativa HOM05D000017 ORTHO05D000013 6.7e-20 102.1 101 53.5
CANSAT35G1021 Cannabis sativa HOM05D000017 ORTHO05D000013 8.7e-20 101.7 52 94.2
CANSAT78G1392 Cannabis sativa HOM05D000017 ORTHO05D000013 1.9e-19 100.5 243 29.6
CANSAT11G2629 Cannabis sativa HOM05D000017 ORTHO05D000013 3.3e-19 99.8 243 28.8
CANSAT80G0333 Cannabis sativa HOM05D000017 ORTHO05D000013 3.3e-19 99.8 110 51.8
CANSAT54G1694 Cannabis sativa HOM05D000017 ORTHO05D000013 2.2e-18 97.1 243 28.0
CANSAT21G0038 Cannabis sativa HOM05D008401 ORTHO05D002765 3.1e-17 93.2 125 44.8
CANSAT56G1010 Cannabis sativa HOM05D000017 ORTHO05D000013 1.5e-16 90.9 245 25.7
CANSAT11G0986 Cannabis sativa HOM05D000017 ORTHO05D000013 2.0e-16 90.5 110 48.2
Nitab4.5_0008359g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.4e-16 89.7 234 29.1
ATR0727G001 Amborella trichopoda HOM05D000017 ORTHO05D000013 7.7e-16 88.6 151 37.7
Nitab4.5_0027852g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 5.0e-15 85.9 240 28.3
CANSAT78G2408 Cannabis sativa HOM05D000017 ORTHO05D000013 6.5e-15 85.5 260 23.8
CANSAT21G1876 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-14 84.3 79 51.9
CANSAT25G1145 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-14 84.3 239 25.9
DCAR_015925 Daucus carota HOM05D006864 ORTHO05D002765 3.2e-14 83.2 94 37.2
CANSAT21G1471 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-13 81.3 239 25.9
CANSAT64G1942 Cannabis sativa HOM05D000017 ORTHO05D000013 1.6e-13 80.9 245 28.6
Solyc10g052716.1 Solanum lycopersicum HOM05D000017 ORTHO05D002765 2.7e-13 80.1 263 24.3
CANSAT35G1872 Cannabis sativa HOM05D000017 ORTHO05D000013 3.6e-13 79.7 239 25.1
Nitab4.5_0004728g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.1e-13 79.0 239 26.4
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 6.1e-13 79.0 263 25.5
Nitab4.5_0009921g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.0e-12 78.2 96 35.4
SGA_v2.0_scaffold1G00045 Striga asiatica HOM05D010396 ORTHO05D002765 1.0e-12 78.2 95 37.9
CANSAT54G1301 Cannabis sativa HOM05D012404 ORTHO05D002765 2.3e-12 77.0 242 28.5
CANSAT78G0171 Cannabis sativa HOM05D000017 ORTHO05D000013 2.3e-12 77.0 239 23.8
Nitab4.5_0001614g0160 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.3e-12 77.0 242 25.6
Nitab4.5_0012915g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.0e-12 76.6 238 25.2
Oeu034871.1 Olea europaea HOM05D000017 ORTHO05D000013 5.1e-12 75.9 219 25.1
CANSAT01G2588 Cannabis sativa HOM05D000017 ORTHO05D000013 6.7e-12 75.5 133 39.1
CANSAT35G1887 Cannabis sativa HOM05D000017 ORTHO05D000013 6.7e-12 75.5 241 24.1
CANSAT25G1873 Cannabis sativa HOM05D000017 ORTHO05D000013 8.8e-12 75.1 245 28.6
CANSAT35G0433 Cannabis sativa HOM05D012404 ORTHO05D002765 1.1e-11 74.7 228 24.1
CANSAT80G1576 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-11 74.7 71 53.5
CANSAT54G1096 Cannabis sativa HOM05D000017 ORTHO05D000013 1.5e-11 74.3 242 23.6
CANSAT78G2345 Cannabis sativa HOM05D000017 ORTHO05D000013 2.0e-11 73.9 71 53.5
CANSAT80G1918 Cannabis sativa HOM05D000017 ORTHO05D000013 2.5e-11 73.6 71 52.1
Nitab4.5_0001968g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.5e-11 73.6 241 21.6
Nitab4.5_0002534g0090 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.3e-11 73.2 239 24.3
CANSAT54G0413 Cannabis sativa HOM05D008401 ORTHO05D002765 4.3e-11 72.8 72 50.0
CANSAT25G3326 Cannabis sativa HOM05D000017 ORTHO05D002765 5.7e-11 72.4 71 47.9
Nitab4.5_0007069g0020 Nicotiana tabacum HOM05D008401 ORTHO05D002765 5.7e-11 72.4 240 25.8
CANSAT54G0823 Cannabis sativa HOM05D000017 ORTHO05D000013 7.4e-11 72.0 98 37.8
CANSAT56G0158 Cannabis sativa HOM05D000003 ORTHO05D000004 7.4e-11 72.0 99 36.4
Nitab4.5_0000403g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 7.4e-11 72.0 242 23.6
Nitab4.5_0002430g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 7.4e-11 72.0 240 25.0
Nitab4.5_0007303g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.4e-11 72.0 244 23.4
CANSAT56G3775 Cannabis sativa HOM05D000017 ORTHO05D002765 9.7e-11 71.6 57 57.9
Nitab4.5_0007005g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.3e-10 71.2 241 23.7
Nitab4.5_0006009g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.8e-10 70.1 233 24.0
Nitab4.5_0003966g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.7e-10 69.7 233 22.3
Nitab4.5_0000832g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.8e-10 69.3 215 25.1
Nitab4.5_0001062g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.3e-10 68.9 120 28.3
Nitab4.5_0002279g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.3e-10 68.9 242 23.6
Nitab4.5_0001212g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.2e-10 68.6 242 21.9
Oeu019782.1 Olea europaea HOM05D012404 ORTHO05D002765 8.2e-10 68.6 240 22.5
CANSAT35G0042 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-09 67.8 107 43.0
Nitab4.5_0001947g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-09 67.8 242 21.9
Nitab4.5_0003887g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-09 67.8 242 21.9
Nitab4.5_0000034g0050 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.8e-09 67.4 241 23.7
Oeu059246.1 Olea europaea HOM05D012404 ORTHO05D002765 1.8e-09 67.4 240 21.7
Sopen05g022560 Solanum pennellii HOM05D000017 ORTHO05D000013 1.8e-09 67.4 241 21.2
Peaxi162Scf00106g02222 Petunia axillaris HOM05D006864 ORTHO05D002765 2.4e-09 67.0 112 28.6
Peaxi162Scf00184g00211 Petunia axillaris HOM05D006864 ORTHO05D002765 2.4e-09 67.0 112 28.6
Nitab4.5_0000890g0220 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.1e-09 66.6 240 24.2
Nitab4.5_0000374g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.1e-09 66.2 94 35.1
Nitab4.5_0000814g0120 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.1e-09 66.2 241 21.6
Nitab4.5_0001591g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.1e-09 66.2 102 33.3
Nitab4.5_0004917g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.1e-09 66.2 233 21.9
CANSAT25G1793 Cannabis sativa HOM05D000017 ORTHO05D000013 5.3e-09 65.9 220 27.3
Nitab4.5_0000423g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 9.1e-09 65.1 232 22.4
Nitab4.5_0001439g0140 Nicotiana tabacum HOM05D008401 ORTHO05D002765 9.1e-09 65.1 236 24.6
Oeu016698.1 Olea europaea HOM05D000017 ORTHO05D000013 1.2e-08 64.7 242 21.9
Peaxi162Scf00164g01221 Petunia axillaris HOM05D006864 ORTHO05D002765 1.2e-08 64.7 112 28.6
Solyc09g150133.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 1.2e-08 64.7 241 21.6
Nitab4.5_0004770g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.0e-08 63.9 102 32.4
Nitab4.5_0011275g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.0e-08 63.9 102 33.3
Oeu009493.1 Olea europaea HOM05D012404 ORTHO05D002765 2.0e-08 63.9 240 21.2
SGA_v2.0_scaffold220G42613 Striga asiatica HOM05D015252 ORTHO05D002765 2.0e-08 63.9 106 33.0
Nitab4.5_0000584g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.6e-08 63.5 94 29.8
Nitab4.5_0003586g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.6e-08 63.5 236 22.9
SGA_v2.0_scaffold10G05133 Striga asiatica HOM05D015252 ORTHO05D002765 2.6e-08 63.5 92 35.9
Nitab4.5_0000721g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.4e-08 63.2 233 22.3
Nitab4.5_0003767g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.4e-08 63.2 226 21.7
Sopen06g002940 Solanum pennellii HOM05D000017 ORTHO05D000013 3.4e-08 63.2 231 23.8
Peaxi162Scf00006g03314 Petunia axillaris HOM05D006864 ORTHO05D002765 4.5e-08 62.8 112 27.7
Sopen02g001070 Solanum pennellii HOM05D000017 ORTHO05D000013 4.5e-08 62.8 231 23.8
Sopen02g032130 Solanum pennellii HOM05D000629 ORTHO05D000013 4.5e-08 62.8 231 23.8
Sopen10g005080 Solanum pennellii HOM05D000017 ORTHO05D000013 4.5e-08 62.8 231 23.8
Sopen12g019990 Solanum pennellii HOM05D000017 ORTHO05D000013 4.5e-08 62.8 231 23.8
Nitab4.5_0003288g0080 Nicotiana tabacum HOM05D008401 ORTHO05D002765 5.9e-08 62.4 236 23.7
Sopen05g006380 Solanum pennellii HOM05D000017 ORTHO05D000013 5.9e-08 62.4 231 24.2
CANSAT56G0367 Cannabis sativa HOM05D000017 ORTHO05D000013 7.7e-08 62.0 101 33.7
CANSAT25G0681 Cannabis sativa HOM05D000017 ORTHO05D000013 1.0e-07 61.6 71 50.7
Sopen06g004330 Solanum pennellii HOM05D000017 ORTHO05D000013 1.3e-07 61.2 231 24.2
SGA_v2.0_scaffold17G08056 Striga asiatica HOM05D010396 ORTHO05D002765 1.3e-07 61.2 126 30.2
Nitab4.5_0002806g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.7e-07 60.8 223 24.2
Nitab4.5_0003674g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.7e-07 60.8 240 20.0
Nitab4.5_0006628g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.7e-07 60.8 233 21.5
Sopen10g022230 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-07 60.8 231 22.9
Nitab4.5_0013596g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.2e-07 60.5 94 27.7
Oeu053795.1 Olea europaea HOM05D012404 ORTHO05D002765 2.2e-07 60.5 118 25.4
Nitab4.5_0007029g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.0e-07 59.3 94 26.6
Nitab4.5_0001173g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.5e-07 58.9 94 27.7
Peaxi162Scf01226g00018 Petunia axillaris HOM05D006864 ORTHO05D000013 6.5e-07 58.9 92 27.2
SGA_v2.0_scaffold122G33338 Striga asiatica HOM05D000196 ORTHO05D010161 6.5e-07 58.9 201 24.4
Solyc10g047821.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 8.5e-07 58.5 95 26.3
Nitab4.5_0000036g0400 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.1e-06 58.2 94 27.7
Nitab4.5_0004295g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-06 57.8 237 23.2
Oeu063037.1 Olea europaea HOM05D012404 ORTHO05D002765 1.4e-06 57.8 124 22.6
Nitab4.5_0006936g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.5e-06 57.0 240 21.7
Nitab4.5_0014828g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.5e-06 57.0 226 21.2
Oeu009472.1 Olea europaea HOM05D012404 ORTHO05D002765 2.5e-06 57.0 124 22.6
Nitab4.5_0001863g0150 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.2e-06 56.6 92 26.1
Sopen09g007640 Solanum pennellii HOM05D000017 ORTHO05D000013 3.2e-06 56.6 233 22.7
Sopen11g019130 Solanum pennellii HOM05D000047 ORTHO05D000589 3.2e-06 56.6 246 22.4
Nitab4.5_0003114g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.2e-06 56.2 190 25.8
Nitab4.5_0004824g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.2e-06 56.2 226 22.6
Nitab4.5_0005092g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.5e-06 55.8 169 26.6
Nitab4.5_0008791g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.5e-06 55.8 233 21.9
Nitab4.5_0000516g0080 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.2e-06 55.5 233 21.0
Sopen01g037270 Solanum pennellii HOM05D000017 ORTHO05D000013 7.2e-06 55.5 236 19.9
Sopen09g012340 Solanum pennellii HOM05D006864 ORTHO05D000013 7.2e-06 55.5 236 22.5
Sopen11g029160 Solanum pennellii HOM05D000017 ORTHO05D000013 7.2e-06 55.5 236 19.9


User provided reference genes

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