Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G0678 Cannabis sativa HOM05D009472 ORTHO05D000137 4.2e-124 448.0 214 100.0
CANSAT80G1813 Cannabis sativa HOM05D009472 ORTHO05D000137 3.1e-103 378.6 224 86.2
CANSAT54G2383 Cannabis sativa HOM05D009472 ORTHO05D000137 1.1e-100 370.2 289 68.5
CANSAT50G0005 Cannabis sativa HOM05D009472 ORTHO05D000137 2.1e-99 365.9 325 62.2
CANSAT80G2531 Cannabis sativa HOM05D009472 ORTHO05D000482 2.1e-91 339.3 305 62.0
CANSAT80G2627 Cannabis sativa HOM05D009472 ORTHO05D000137 7.9e-91 337.4 374 52.7
CANSAT35G0617 Cannabis sativa HOM05D009472 ORTHO05D000137 4.3e-81 305.1 151 98.0
CANSAT54G2039 Cannabis sativa HOM05D009472 ORTHO05D000137 4.3e-81 305.1 151 98.0
CANSAT21G0269 Cannabis sativa HOM05D009472 ORTHO05D000137 1.2e-70 270.4 322 49.4
CANSAT21G0042 Cannabis sativa HOM05D009472 ORTHO05D000137 2.8e-56 222.6 109 95.4
CANSAT78G0808 Cannabis sativa HOM05D009472 ORTHO05D000137 1.1e-55 220.7 151 74.8
CANSAT11G1718 Cannabis sativa HOM05D009472 ORTHO05D000137 8.8e-50 201.1 372 35.5
CANSAT56G1481 Cannabis sativa HOM05D009472 ORTHO05D000482 2.8e-48 196.1 348 36.5
CANSAT64G1982 Cannabis sativa HOM05D009472 ORTHO05D000137 1.1e-39 167.5 243 42.4
CANSAT21G1289 Cannabis sativa HOM05D009472 ORTHO05D000137 5.4e-39 165.2 331 36.3
CANSAT01G1142 Cannabis sativa HOM05D009472 ORTHO05D000482 7.5e-33 144.8 349 30.9
CANSAT54G2657 Cannabis sativa HOM05D009472 ORTHO05D000137 1.0e-29 134.4 63 98.4
CANSAT78G0078 Cannabis sativa HOM05D009472 ORTHO05D000137 6.6e-29 131.7 63 96.8
CANSAT11G0653 Cannabis sativa HOM05D009472 ORTHO05D000137 6.2e-27 125.2 278 40.6
CANSAT54G2098 Cannabis sativa HOM05D000679 ORTHO05D000137 5.2e-26 122.1 344 28.2
CANSAT25G0378 Cannabis sativa HOM05D000679 ORTHO05D000137 1.7e-21 107.1 296 27.7
CANSAT54G2653 Cannabis sativa HOM05D000679 ORTHO05D000137 3.0e-21 106.3 344 26.7
CANSAT56G0862 Cannabis sativa HOM05D000679 ORTHO05D000137 1.9e-20 103.6 121 49.6
CANSAT80G0147 Cannabis sativa HOM05D017160 ORTHO05D000137 1.9e-15 87.0 74 58.1
CANSAT64G1718 Cannabis sativa HOM05D017160 ORTHO05D000137 3.2e-15 86.3 74 58.1
CANSAT54G1856 Cannabis sativa HOM05D009472 ORTHO05D000137 7.1e-15 85.1 103 46.6
CANSAT80G2520 Cannabis sativa HOM05D017160 ORTHO05D013047 1.6e-14 84.0 107 45.8
CANSAT35G1242 Cannabis sativa HOM05D000679 ORTHO05D000137 1.0e-13 81.3 59 59.3
CANSAT78G0118 Cannabis sativa HOM05D009472 ORTHO05D000137 3.0e-13 79.7 59 57.6
Oeu043719.1 Olea europaea HOM05D011057 ORTHO05D013047 1.5e-12 77.4 206 29.1
Oeu032768.1 Olea europaea HOM05D011057 ORTHO05D013047 2.4e-10 70.1 194 28.4
CANSAT25G1234 Cannabis sativa HOM05D023333 ORTHO05D000137 1.2e-09 67.8 158 33.5
CANSAT25G1319 Cannabis sativa HOM05D000679 ORTHO05D000137 3.4e-09 66.2 58 50.0
CANSAT78G2225 Cannabis sativa HOM05D009472 ORTHO05D000137 5.8e-09 65.5 58 50.0
CANSAT80G2652 Cannabis sativa HOM05D023333 ORTHO05D000137 5.8e-09 65.5 158 32.3
Sopen12g024090 Solanum pennellii HOM05D000679 ORTHO05D000137 9.9e-09 64.7 156 31.4
CAN.G227.2 Capsicum annuum HOM05D000541 ORTHO05D000137 1.7e-08 63.9 200 29.5
Nitab4.5_0007904g0010 Nicotiana tabacum HOM05D008636 ORTHO05D000137 2.9e-08 63.2 157 29.3
Sopen10g028350 Solanum pennellii HOM05D000679 ORTHO05D000137 2.9e-08 63.2 146 31.5
CANSAT54G1484 Cannabis sativa HOM05D000679 ORTHO05D000137 3.8e-08 62.8 128 32.8
CAN.G568.8 Capsicum annuum HOM05D000541 ORTHO05D000137 4.9e-08 62.4 157 31.8
Nitab4.5_0005654g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 6.4e-08 62.0 136 34.6
Sopen02g006090 Solanum pennellii HOM05D000541 ORTHO05D000137 8.4e-08 61.6 143 33.6
Sopen02g028490 Solanum pennellii HOM05D000541 ORTHO05D000137 8.4e-08 61.6 143 33.6
Sopen04g016430 Solanum pennellii HOM05D000541 ORTHO05D000137 8.4e-08 61.6 143 33.6
Sopen04g016450 Solanum pennellii HOM05D000541 ORTHO05D000137 8.4e-08 61.6 143 33.6
CAN.G165.29 Capsicum annuum HOM05D000541 ORTHO05D000137 1.1e-07 61.2 145 30.3
CANSAT54G0513 Cannabis sativa HOM05D008636 ORTHO05D000137 3.2e-07 59.7 138 34.1
PGSC0003DMG400044701 Solanum tuberosum HOM05D000541 ORTHO05D000137 3.2e-07 59.7 176 30.7
Oeu053793.1 Olea europaea HOM05D011057 ORTHO05D013047 4.2e-07 59.3 63 31.7
Nitab4.5_0005355g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.4e-07 58.9 130 31.5
CAN.G93.4 Capsicum annuum HOM05D000541 ORTHO05D000137 9.3e-07 58.2 208 26.0
Oeu047965.1 Olea europaea HOM05D002749 ORTHO05D000708 1.2e-06 57.8 138 29.7
PGSC0003DMG400007650 Solanum tuberosum HOM05D000541 ORTHO05D000137 1.6e-06 57.4 136 36.0
Oeu041759.1 Olea europaea HOM05D002749 ORTHO05D000708 3.5e-06 56.2 108 29.6
Sopen00g004650 Solanum pennellii HOM05D000679 ORTHO05D000137 3.5e-06 56.2 218 27.1
Oeu008075.1 Olea europaea HOM05D002749 ORTHO05D000708 7.8e-06 55.1 186 23.1
Sopen12g015350 Solanum pennellii HOM05D000541 ORTHO05D000137 7.8e-06 55.1 139 35.3


User provided reference genes

Program Settings