Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G0607 Cannabis sativa HOM05D000030 ORTHO05D000031 6.9e-53 210.3 102 100.0
CANSAT35G0341 Cannabis sativa HOM05D000030 ORTHO05D000031 8.8e-48 193.4 93 98.9
CANSAT54G1930 Cannabis sativa HOM05D000030 ORTHO05D000031 5.4e-21 104.4 52 96.2
CSS0020418 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 3.0e-11 72.0 113 32.7
CANSAT35G1459 Cannabis sativa HOM05D000030 ORTHO05D000009 5.6e-10 67.8 33 93.9
Oeu040912.1 Olea europaea HOM05D000030 ORTHO05D000031 1.2e-09 66.6 109 35.8
Oeu018461.1 Olea europaea HOM05D000030 ORTHO05D000031 4.7e-09 64.7 111 36.0
Oeu037084.1 Olea europaea HOM05D000030 ORTHO05D000031 1.1e-08 63.5 117 33.3
Atru.chr4.1138 Acer truncatum HOM05D000030 ORTHO05D000031 1.4e-08 63.2 113 33.6
Atru.chr4.1208 Acer truncatum HOM05D000030 ORTHO05D000009 1.4e-08 63.2 113 33.6
Atru.chr7.12 Acer truncatum HOM05D000030 ORTHO05D000009 1.4e-08 63.2 113 33.6
Oeu010816.1 Olea europaea HOM05D000030 ORTHO05D000031 1.4e-08 63.2 107 33.6
TWI34G1402 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 1.4e-08 63.2 113 29.2
Atru.chr4.1709 Acer truncatum HOM05D000030 ORTHO05D000009 1.8e-08 62.8 113 33.6
Oeu047549.1 Olea europaea HOM05D000030 ORTHO05D000009 3.1e-08 62.0 111 34.2
Oeu056459.1 Olea europaea HOM05D000030 ORTHO05D000031 3.1e-08 62.0 113 36.3
Oeu020682.1 Olea europaea HOM05D000030 ORTHO05D000031 4.0e-08 61.6 117 30.8
Oeu029945.1 Olea europaea HOM05D000030 ORTHO05D000031 5.2e-08 61.2 111 34.2
QL04p005246 Quercus lobata HOM05D000030 ORTHO05D008232 8.9e-08 60.5 107 34.6
QL09p025940 Quercus lobata HOM05D000030 ORTHO05D000009 8.9e-08 60.5 113 31.0
Atru.chr7.19 Acer truncatum HOM05D000030 ORTHO05D000031 1.2e-07 60.1 113 31.9
Atru.ctg1438.3 Acer truncatum HOM05D000030 ORTHO05D000009 1.2e-07 60.1 113 31.9
Atru.chr11.822 Acer truncatum HOM05D000030 ORTHO05D000031 1.5e-07 59.7 113 30.1
Oeu017856.1 Olea europaea HOM05D000030 ORTHO05D000031 2.0e-07 59.3 113 35.4
Oeu050004.1 Olea europaea HOM05D000030 ORTHO05D000031 2.0e-07 59.3 110 31.8
QL01p050278 Quercus lobata HOM05D000030 ORTHO05D000009 2.0e-07 59.3 113 30.1
QL01p050285 Quercus lobata HOM05D000030 ORTHO05D000009 2.0e-07 59.3 113 30.1
Oeu023159.1 Olea europaea HOM05D000030 ORTHO05D000009 2.6e-07 58.9 111 33.3
Oeu039002.1 Olea europaea HOM05D000030 ORTHO05D000031 2.6e-07 58.9 118 30.5
Hund05515 Selenicereus undatus HOM05D000030 ORTHO05D000031 3.4e-07 58.5 108 28.7
CiPaw.16G071900 Carya illinoinensis HOM05D000030 ORTHO05D000009 4.4e-07 58.2 127 29.1
Hund04417 Selenicereus undatus HOM05D000030 ORTHO05D000009 4.4e-07 58.2 108 27.8
Hund22274 Selenicereus undatus HOM05D000030 ORTHO05D000009 4.4e-07 58.2 108 27.8
Hund30609 Selenicereus undatus HOM05D000030 ORTHO05D000031 4.4e-07 58.2 108 27.8
TPR.G27969 Trifolium pratense HOM05D000030 ORTHO05D000009 4.4e-07 58.2 104 31.7
Hma1.2p1_1745F.1_g300240 Hydrangea macrophylla HOM05D000030 ORTHO05D000031 5.8e-07 57.8 106 32.1
Atru.chr2.1368 Acer truncatum HOM05D000034 ORTHO05D000003 7.5e-07 57.4 112 32.1
CSS0049125 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000031 7.5e-07 57.4 87 39.1
CiPaw.06G145100 Carya illinoinensis HOM05D000030 ORTHO05D000009 7.5e-07 57.4 108 30.6
CiPaw.10G018500 Carya illinoinensis HOM05D000030 ORTHO05D000009 7.5e-07 57.4 108 30.6
Atru.chr1.2183 Acer truncatum HOM05D000030 ORTHO05D000031 9.8e-07 57.0 120 31.7
Oeu026787.1 Olea europaea HOM05D000030 ORTHO05D000031 9.8e-07 57.0 105 32.4
SHI45821 Sapria himalayana HOM05D000035 ORTHO05D000031 9.8e-07 57.0 75 30.7
Atru.chr3.4252 Acer truncatum HOM05D000030 ORTHO05D000031 1.3e-06 56.6 112 30.4
Hma1.2p1_0859F.1_g229490 Hydrangea macrophylla HOM05D000030 ORTHO05D000031 1.3e-06 56.6 102 34.3
SHI41788 Sapria himalayana HOM05D000035 ORTHO05D000031 1.3e-06 56.6 75 34.7
Hund08771 Selenicereus undatus HOM05D000030 ORTHO05D000009 1.3e-06 56.6 108 26.9
CiPaw.09G102700 Carya illinoinensis HOM05D000030 ORTHO05D000009 1.7e-06 56.2 108 29.6
CsaV3_5G023190 Cucumis sativus L. HOM05D000030 ORTHO05D000031 1.7e-06 56.2 87 39.1
RcHm_v2.0_Chr4g0391921 Rosa chinensis HOM05D000030 ORTHO05D000031 1.7e-06 56.2 109 28.4
CSS0048206 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 2.2e-06 55.8 105 30.5
Hma1.2p1_0875F.1_g231530 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.2e-06 55.8 114 28.1
Hma1.2p1_2174F.1_g316080 Hydrangea macrophylla HOM05D000030 ORTHO05D000031 2.2e-06 55.8 102 31.4
QL07p014486 Quercus lobata HOM05D000030 ORTHO05D000009 2.2e-06 55.8 105 29.5
QL10p060035 Quercus lobata HOM05D000030 ORTHO05D000009 2.2e-06 55.8 136 25.7
ECA232G1181 Erigeron canadensis HOM05D000030 ORTHO05D000031 2.9e-06 55.5 65 41.5
FvH4_7g12360 Fragaria vesca HOM05D000030 ORTHO05D000031 2.9e-06 55.5 111 28.8
Hma1.2p1_0081F.1_g042310 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.9e-06 55.5 126 27.8
Hma1.2p1_1202F.1_g266820 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.9e-06 55.5 126 27.8
Hma1.2p1_1597F.1_g292850 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.9e-06 55.5 114 27.2
Oeu019931.1 Olea europaea HOM05D000030 ORTHO05D000009 2.9e-06 55.5 107 31.8
Rhsim05G0082600 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.9e-06 55.5 102 33.3
SHI22077 Sapria himalayana HOM05D000030 ORTHO05D000031 2.9e-06 55.5 131 29.0
Rhsim07G0239000 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.7e-06 55.1 102 33.3
COL.COLO4_07685 Corchorus olitorius HOM05D028403 ORTHO05D000031 4.9e-06 54.7 80 37.5
Gorai.005G011200 Gossypium raimondii HOM05D000030 ORTHO05D000009 4.9e-06 54.7 101 31.7
Hma1.2p1_0298F.1_g117310 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 4.9e-06 54.7 133 28.6
Oeu046360.1 Olea europaea HOM05D000030 ORTHO05D000009 4.9e-06 54.7 116 29.3
QL08p060040 Quercus lobata HOM05D000030 ORTHO05D000009 4.9e-06 54.7 136 26.5
QL09p001102 Quercus lobata HOM05D000030 ORTHO05D003511 4.9e-06 54.7 113 28.3
QL09p032347 Quercus lobata HOM05D000030 ORTHO05D000009 4.9e-06 54.7 136 26.5
RhsimUnG0212000 Rhododendron simsii HOM05D000030 ORTHO05D000009 4.9e-06 54.7 105 31.4
SHI41473 Sapria himalayana HOM05D000035 ORTHO05D000031 4.9e-06 54.7 56 39.3
Hma1.2p1_0284F.1_g113810 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 6.4e-06 54.3 102 32.4
Hma1.2p1_1137F.1_g260640 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 6.4e-06 54.3 118 30.5
Hma1.2p1_1796F.1_g302720 Hydrangea macrophylla HOM05D000030 ORTHO05D000031 6.4e-06 54.3 105 29.5
Nn3g19483 Nelumbo nucifera HOM05D000030 ORTHO05D000031 6.4e-06 54.3 108 30.6
Oeu056641.2 Olea europaea HOM05D000030 ORTHO05D000009 6.4e-06 54.3 107 30.8
Rhsim01G0161000 Rhododendron simsii HOM05D000030 ORTHO05D000009 6.4e-06 54.3 130 30.8
Aqoxy1G02732 Aquilegia oxysepala HOM05D000030 ORTHO05D000031 8.3e-06 53.9 113 29.2
Hma1.2p1_0123F.1_g057940 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 8.3e-06 53.9 126 27.0
Hma1.2p1_0451F.1_g155750 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 8.3e-06 53.9 132 25.0
Oeu046018.1 Olea europaea HOM05D000030 ORTHO05D000031 8.3e-06 53.9 115 29.6
Rhsim10G0116200 Rhododendron simsii HOM05D000030 ORTHO05D000009 8.3e-06 53.9 113 33.6
Rhsim12G0091300 Rhododendron simsii HOM05D000030 ORTHO05D000031 8.3e-06 53.9 108 34.3
TWI38G1098 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 8.3e-06 53.9 47 44.7


User provided reference genes

Program Settings