Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G0309 Cannabis sativa HOM05D009013 ORTHO05D009761 5.2e-136 488.0 306 100.0
QL05p060720 Quercus lobata HOM05D009013 ORTHO05D009761 8.2e-33 145.2 385 39.7
Haze_05479 Corylus avellana HOM05D009013 ORTHO05D009761 1.2e-31 141.4 339 40.1
Cfa001036 Carpinus fangiana HOM05D009013 ORTHO05D009761 1.0e-30 138.3 335 40.6
Prupe.4G073200 Prunus persica HOM05D014736 ORTHO05D009761 8.0e-28 128.6 342 47.4
CiPaw.10G096600 Carya illinoinensis HOM05D009013 ORTHO05D009761 8.3e-25 118.6 365 34.2
Lj4g0005206 Lotus japonicus HOM05D009013 ORTHO05D009761 7.0e-24 115.5 313 33.2
Lalb_Chr07g0186121 Lupinus albus HOM05D009013 ORTHO05D009761 7.2e-21 105.5 310 36.1
Ciclev10017480m.g Citrus clementina HOM05D009852 ORTHO05D009761 2.7e-20 103.6 313 32.6
MD05G1292200 Malus domestica HOM05D014736 ORTHO05D009761 4.7e-20 102.8 250 44.0
Thecc.06G158200 Theobroma cacao HOM05D009852 ORTHO05D009761 6.1e-20 102.4 341 37.5
FAN11G2258 Fragaria x ananassa HOM05D014736 ORTHO05D009761 1.8e-19 100.9 161 44.1
FvH4_3g06440 Fragaria vesca HOM05D014736 ORTHO05D009761 8.8e-19 98.6 149 45.6
FAN25G1841 Fragaria x ananassa HOM05D014736 ORTHO05D009761 8.8e-19 98.6 138 48.6
Dinv03635 Davidia involucrata HOM05D009013 ORTHO05D009761 1.2e-18 98.2 346 30.6
Phvul.009G214600 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 4.4e-18 96.3 334 35.0
Manes.15G116600 Manihot esculenta HOM05D009852 ORTHO05D009761 9.8e-18 95.1 400 33.2
VMungo1309G2255 Vigna mungo HOM05D009013 ORTHO05D009761 9.8e-18 95.1 299 32.4
CiPaw.09G129900 Carya illinoinensis HOM05D009013 ORTHO05D009761 2.8e-17 93.6 108 49.1
RcHm_v2.0_Chr5g0012861 Rosa chinensis HOM05D014736 ORTHO05D009761 1.8e-16 90.9 163 44.2
Duzib192G0106 Durio zibethinus HOM05D009852 ORTHO05D009761 2.4e-16 90.5 340 41.8
Lj6g0000102 Lotus japonicus HOM05D009013 ORTHO05D009761 2.4e-16 90.5 349 33.5
Lalb_Chr12g0204801 Lupinus albus HOM05D009013 ORTHO05D009761 3.1e-16 90.1 314 30.9
MD10G1268000 Malus domestica HOM05D014736 ORTHO05D009761 7.0e-16 89.0 269 37.5
Manes.17G064400 Manihot esculenta HOM05D009852 ORTHO05D009761 1.6e-15 87.8 361 33.0
Gorai.010G164100 Gossypium raimondii HOM05D009852 ORTHO05D009761 2.0e-15 87.4 298 35.6
FAN21G2246 Fragaria x ananassa HOM05D014736 ORTHO05D009761 2.7e-15 87.0 143 42.7
Glyma.09G085700 Glycine max HOM05D009013 ORTHO05D009761 3.5e-15 86.7 343 35.0
Atru.chr10.1414 Acer truncatum HOM05D009852 ORTHO05D009761 1.0e-14 85.1 308 32.5
VMungo0251G0903 Vigna mungo HOM05D009013 ORTHO05D009761 1.3e-14 84.7 328 28.4
Lalb_Chr13g0295461 Lupinus albus HOM05D009013 ORTHO05D009761 2.9e-14 83.6 289 32.2
Gohir.D05G154000 Gossypium hirsutum HOM05D009852 ORTHO05D009761 6.6e-14 82.4 339 39.8
Potri.001G354600 Populus trichocarpa HOM05D009852 ORTHO05D009761 6.6e-14 82.4 333 31.5
Gorai.009G158300 Gossypium raimondii HOM05D009852 ORTHO05D009761 1.5e-13 81.3 339 35.4
Gohir.D06G140600 Gossypium hirsutum HOM05D009852 ORTHO05D009761 1.9e-13 80.9 301 34.6
Eucgr.D00345 Eucalyptus grandis HOM05D014736 ORTHO05D009761 2.5e-13 80.5 154 37.7
Potri.011G077700 Populus trichocarpa HOM05D009852 ORTHO05D009761 9.5e-13 78.6 374 28.9
TPR.G22001 Trifolium pratense HOM05D009013 ORTHO05D009761 9.5e-13 78.6 290 29.7
Medtr2g049330 Medicago truncatula HOM05D009013 ORTHO05D009761 2.1e-12 77.4 282 32.3
Glyma.08G121600 Glycine max HOM05D009013 ORTHO05D009761 3.6e-12 76.6 319 29.5
Lalb_Chr23g0275971 Lupinus albus HOM05D009013 ORTHO05D009761 1.8e-11 74.3 298 29.5
TWI73G0525 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 1.8e-11 74.3 333 27.3
Glyma.15G195700 Glycine max HOM05D009013 ORTHO05D009761 2.3e-11 73.9 326 32.8
Gohir.A05G151600 Gossypium hirsutum HOM05D009852 ORTHO05D009761 2.3e-11 73.9 339 34.2
Medtr6g068870 Medicago truncatula HOM05D009013 ORTHO05D009761 5.2e-11 72.8 302 29.5
arahy.Tifrunner.gnm1.ann1.5V604V Arachis hypogaea HOM05D009013 ORTHO05D009761 6.8e-11 72.4 306 31.4
EL10Ac8g19799 Beta vulgaris HOM05D018558 ORTHO05D018254 6.8e-11 72.4 334 30.2
Phvul.002G244200 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 6.8e-11 72.4 330 28.2
arahy.Tifrunner.gnm1.ann1.3YWF5K Arachis hypogaea HOM05D009013 ORTHO05D009761 8.9e-11 72.0 314 29.3
COL.COLO4_22804 Corchorus olitorius HOM05D009852 ORTHO05D009761 1.2e-10 71.6 298 34.9
Oeu046855.1 Olea europaea HOM05D012266 ORTHO05D011876 1.5e-10 71.2 330 28.2
Psat1g018200 Pisum sativum HOM05D009013 ORTHO05D009761 7.5e-10 68.9 298 27.9
Hma1.2p1_0015F.1_g010420 Hydrangea macrophylla HOM05D009013 ORTHO05D009761 9.8e-10 68.6 320 28.8
Oeu021526.1 Olea europaea HOM05D012266 ORTHO05D011876 2.9e-09 67.0 332 29.2
TWI09G1113 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 2.9e-09 67.0 349 26.9
CSS0047309 Camellia sinensis var. sinensis HOM05D014645 ORTHO05D009761 3.7e-09 66.6 439 29.2
Gohir.A10G031700 Gossypium hirsutum HOM05D009852 ORTHO05D009761 3.7e-09 66.6 311 36.7
Duzib160G0535 Durio zibethinus HOM05D009852 ORTHO05D009761 6.3e-09 65.9 337 35.6
Glyma.05G164200 Glycine max HOM05D009013 ORTHO05D009761 6.3e-09 65.9 279 29.4
Glyma.13G051300 Glycine max HOM05D009013 ORTHO05D009761 6.3e-09 65.9 46 63.0
Actinidia19483 Actinidia chinensis HOM05D014645 ORTHO05D009761 1.1e-08 65.1 114 42.1
TWI09G0214 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 1.1e-08 65.1 349 26.6
Lalb_Chr08g0233301 Lupinus albus HOM05D009013 ORTHO05D009761 1.8e-08 64.3 325 28.6
AT1G29530 Arabidopsis thaliana HOM05D008719 ORTHO05D010898 1.2e-07 61.6 135 38.5
CsaV3_6G051330 Cucumis sativus L. HOM05D022667 ORTHO05D009761 1.6e-07 61.2 311 29.3
Gohir.D10G032500 Gossypium hirsutum HOM05D009852 ORTHO05D009761 2.7e-07 60.5 96 40.6
Gorai.011G034400 Gossypium raimondii HOM05D009852 ORTHO05D009761 2.7e-07 60.5 96 40.6
Psat1g020440 Pisum sativum HOM05D009013 ORTHO05D009761 2.7e-07 60.5 52 57.7
Oeu001056.1 Olea europaea HOM05D012266 ORTHO05D011876 4.6e-07 59.7 326 28.2
TPR.G31355 Trifolium pratense HOM05D009013 ORTHO05D009761 4.6e-07 59.7 287 28.9
DCAR_007913 Daucus carota HOM05D009013 ORTHO05D009761 5.9e-07 59.3 114 34.2
Duzib235G1088 Durio zibethinus HOM05D009852 ORTHO05D009761 1.0e-06 58.5 407 31.9
BcaC02g11497 Brassica carinata HOM05D008719 ORTHO05D010898 1.3e-06 58.2 112 39.3
SalBow8G3146 Salvia bowleyana HOM05D012266 ORTHO05D011876 1.3e-06 58.2 330 31.2
MELO3C007172.2 Cucumis melo HOM05D022667 ORTHO05D009761 2.3e-06 57.4 311 30.9
MSTRG.13241 Avicennia marina HOM05D012266 ORTHO05D011876 6.6e-06 55.8 170 31.2


User provided reference genes

Program Settings