Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G0271 Cannabis sativa HOM05D006619 ORTHO05D008351 3.8e-147 525.0 307 100.0
Prupe.5G014600 Prunus persica HOM05D006619 ORTHO05D008351 2.9e-70 269.6 363 48.8
FAN08G1468 Fragaria x ananassa HOM05D006619 ORTHO05D008351 3.9e-67 259.2 350 47.1
FAN18G2839 Fragaria x ananassa HOM05D006619 ORTHO05D008351 6.7e-67 258.5 350 47.4
FvH4_5g24810 Fragaria vesca HOM05D006619 ORTHO05D008351 4.3e-66 255.8 350 46.9
FAN04G1190 Fragaria x ananassa HOM05D006619 ORTHO05D008351 6.3e-65 251.9 350 46.3
RcHm_v2.0_Chr7g0215151 Rosa chinensis HOM05D006619 ORTHO05D008351 1.1e-64 251.1 330 47.9
COL.COLO4_16736 Corchorus olitorius HOM05D006619 ORTHO05D008351 7.7e-63 245.0 354 44.9
MD06G1011900 Malus domestica HOM05D006619 ORTHO05D008351 1.3e-62 244.2 342 46.2
Glyma.09G217700 Glycine max HOM05D006619 ORTHO05D008351 1.7e-62 243.8 338 45.0
TAR629G0027 Trochodendron aralioides HOM05D006619 ORTHO05D008351 5.0e-62 242.3 354 45.5
GSVIVG01036901001 Vitis vinifera HOM05D006619 ORTHO05D008351 5.0e-62 242.3 321 48.0
Dinv37439 Davidia involucrata HOM05D006619 ORTHO05D008351 6.5e-62 241.9 324 46.9
FAN13G0980 Fragaria x ananassa HOM05D006619 ORTHO05D008351 3.2e-61 239.6 355 45.6
Thecc.03G321400 Theobroma cacao HOM05D006619 ORTHO05D008351 4.2e-61 239.2 358 42.7
Duzib084G0833 Durio zibethinus HOM05D006619 ORTHO05D008351 2.3e-59 233.4 357 43.1
Lalb_Chr05g0215221 Lupinus albus HOM05D006619 ORTHO05D008351 8.8e-59 231.5 345 44.1
TWI60G1390 Tripterygium wilfordii HOM05D006619 ORTHO05D008351 1.1e-58 231.1 340 44.4
Ciclev10001580m.g Citrus clementina HOM05D006619 ORTHO05D008351 2.0e-58 230.3 345 43.5
Lj2g0025157 Lotus japonicus HOM05D006619 ORTHO05D008351 3.3e-58 229.6 347 45.0
Medtr5g025800 Medicago truncatula HOM05D006619 ORTHO05D008351 7.4e-58 228.4 346 43.6
CiPaw.11G070000 Carya illinoinensis HOM05D006619 ORTHO05D008351 2.2e-57 226.9 338 44.7
Glyma.01G152500 Glycine max HOM05D006619 ORTHO05D008351 8.2e-57 224.9 370 40.5
Gohir.D08G169400 Gossypium hirsutum HOM05D006619 ORTHO05D008351 2.4e-56 223.4 331 42.9
TPR.G7876 Trifolium pratense HOM05D006619 ORTHO05D008351 4.1e-56 222.6 345 42.9
Gorai.004G176600 Gossypium raimondii HOM05D006619 ORTHO05D008351 6.9e-56 221.9 331 42.6
Gohir.A08G148300 Gossypium hirsutum HOM05D006619 ORTHO05D008351 3.4e-55 219.5 331 43.2
Lsat_1_v5_gn_3_19920 Lactuca sativa HOM05D006619 ORTHO05D008351 1.3e-54 217.6 288 45.8
Atru.chr6.2146 Acer truncatum HOM05D006619 ORTHO05D008351 1.7e-54 217.2 347 45.8
Cfa012616 Carpinus fangiana HOM05D006619 ORTHO05D008351 3.8e-54 216.1 317 47.6
Psat0s808g0080 Pisum sativum HOM05D006619 ORTHO05D008351 1.1e-53 214.5 341 41.9
Sabra01G0179200 Salix brachista HOM05D006619 ORTHO05D008351 1.9e-53 213.8 347 43.5
Ca_25054_v3 Cicer arietinum L. HOM05D006619 ORTHO05D008351 9.4e-53 211.5 345 43.2
PSO017G2194 Papaver somniferum HOM05D006619 ORTHO05D008351 1.2e-52 211.1 325 42.2
PGR031G2471 Punica granatum HOM05D006619 ORTHO05D008351 1.6e-52 210.7 314 44.6
Rhsim07G0140900 Rhododendron simsii HOM05D006619 ORTHO05D008351 1.6e-52 210.7 350 42.0
PSO170G1900 Papaver somniferum HOM05D006619 ORTHO05D008351 2.1e-52 210.3 323 42.7
Sopen08g023780 Solanum pennellii HOM05D006619 ORTHO05D008351 5.2e-51 205.7 343 40.8
Lalb_Chr16g0380481 Lupinus albus HOM05D006619 ORTHO05D008351 2.0e-50 203.8 350 40.6
PGSC0003DMG400020810 Solanum tuberosum HOM05D006619 ORTHO05D008351 3.3e-50 203.0 340 40.6
Manes.17G002400 Manihot esculenta HOM05D006619 ORTHO05D008351 4.4e-50 202.6 337 41.8
Peaxi162Scf00014g02116 Petunia axillaris HOM05D006619 ORTHO05D008351 5.7e-50 202.2 354 39.8
Solyc08g075150.3 Solanum lycopersicum HOM05D006619 ORTHO05D008351 5.7e-50 202.2 342 39.8
Duzib205G1329 Durio zibethinus HOM05D006619 ORTHO05D008351 2.2e-49 200.3 348 41.1
Eucgr.D02571 Eucalyptus grandis HOM05D006619 ORTHO05D008351 1.1e-48 198.0 340 43.2
HanXRQChr06g0173221 Helianthus annuus HOM05D006619 ORTHO05D008351 1.1e-48 198.0 308 41.6
Actinidia18172 Actinidia chinensis HOM05D006619 ORTHO05D008351 1.8e-48 197.2 351 37.9
ClCG11G016190 Citrullus lanatus HOM05D006619 ORTHO05D008351 4.1e-48 196.1 335 37.6
Phvul.002G123000 Phaseolus vulgaris HOM05D006619 ORTHO05D008351 5.3e-48 195.7 319 42.3
Dinv09413 Davidia involucrata HOM05D006619 ORTHO05D008351 7.0e-48 195.3 303 43.6
AUR62010492 Chenopodium quinoa HOM05D006619 ORTHO05D008351 9.1e-48 194.9 311 41.8
VMungo1215G3049 Vigna mungo HOM05D006619 ORTHO05D008351 2.0e-47 193.7 297 42.1
Sc07g0008130 Simmondsia chinensis HOM05D006619 ORTHO05D008351 7.7e-47 191.8 287 42.2
THA.LOC104811203 Tarenaya hassleriana HOM05D006619 ORTHO05D008351 2.9e-46 189.9 314 42.0
Aqoxy3G01986 Aquilegia oxysepala HOM05D006619 ORTHO05D008351 5.0e-46 189.1 345 36.8
Lj8A366T23 Lonicera japonica HOM05D006619 ORTHO05D008351 5.0e-46 189.1 290 42.8
Potri.004G234300 Populus trichocarpa HOM05D006619 ORTHO05D008351 1.1e-45 188.0 237 51.5
Nitab4.5_0000975g0010 Nicotiana tabacum HOM05D006619 ORTHO05D008351 1.5e-45 187.6 364 38.2
Nitab4.5_0000236g0060 Nicotiana tabacum HOM05D006619 ORTHO05D008351 1.2e-44 184.5 362 38.1
Ah.12g058350 Amaranthus hybridus HOM05D006619 ORTHO05D008351 2.1e-44 183.7 295 41.0
AUR62017411 Chenopodium quinoa HOM05D006619 ORTHO05D008351 2.7e-44 183.3 309 41.4
ECA246G4124 Erigeron canadensis HOM05D006619 ORTHO05D008351 6.1e-44 182.2 322 41.0
Migut.E01382 Erythranthe guttata HOM05D006619 ORTHO05D008351 1.0e-43 181.4 294 41.2
ATR0568G188 Amborella trichopoda HOM05D006619 ORTHO05D008351 3.0e-43 179.9 292 41.4
DCAR_004540 Daucus carota HOM05D006619 ORTHO05D008351 3.0e-43 179.9 333 40.5
CDE01G0342 Ceratophyllum demersum HOM05D006619 ORTHO05D008351 8.8e-43 178.3 322 36.3
Nn1g09329 Nelumbo nucifera HOM05D006619 ORTHO05D008351 2.0e-42 177.2 208 51.9
arahy.Tifrunner.gnm1.ann1.7E2RQS Arachis hypogaea HOM05D006619 ORTHO05D008351 3.3e-42 176.4 300 40.7
arahy.Tifrunner.gnm1.ann1.TY5C82 Arachis hypogaea HOM05D006619 ORTHO05D008351 3.3e-42 176.4 300 40.7
CSS0018284 Camellia sinensis var. sinensis HOM05D006619 ORTHO05D008351 3.3e-42 176.4 265 43.8
Haze_08039 Corylus avellana HOM05D006619 ORTHO05D008351 1.7e-41 174.1 205 52.7
Haze_08049 Corylus avellana HOM05D006619 ORTHO05D008351 1.7e-41 174.1 205 52.7
EL10Ac5g12595 Beta vulgaris HOM05D006619 ORTHO05D008351 4.8e-41 172.6 265 41.5
MELO3C010535.2 Cucumis melo HOM05D006619 ORTHO05D008351 6.3e-41 172.2 284 39.1
QL12p003333 Quercus lobata HOM05D006619 ORTHO05D008351 1.1e-40 171.4 198 52.0
CsaV3_4G014810 Cucumis sativus L. HOM05D006619 ORTHO05D008351 1.7e-38 164.1 288 37.5
Hund14312 Selenicereus undatus HOM05D006619 ORTHO05D008351 2.5e-37 160.2 230 43.0
Sed0005654 Sechium edule HOM05D006619 ORTHO05D008351 1.6e-36 157.5 229 42.8
Cc08_g06080 Coffea canephora HOM05D006619 ORTHO05D008351 3.6e-36 156.4 333 35.1
Manes.15G190475 Manihot esculenta HOM05D006619 ORTHO05D008351 8.0e-36 155.2 209 46.9
Sed0000478 Sechium edule HOM05D006619 ORTHO05D008351 1.2e-34 151.4 231 41.6
SHI32758 Sapria himalayana HOM05D006619 ORTHO05D008351 2.0e-34 150.6 335 34.9
Sp2g10250 Schrenkiella parvula HOM05D006619 ORTHO05D008351 6.3e-33 145.6 322 35.1
AL8G13490 Arabidopsis lyrata HOM05D006619 ORTHO05D008351 2.4e-32 143.7 322 36.0
CARHR176830 Cardamine hirsuta HOM05D006619 ORTHO05D008351 9.1e-32 141.7 322 35.4
SEGI_11154 Sequoiadendron giganteum HOM05D006619 ORTHO05D008351 1.6e-31 141.0 275 37.5
BcaC04g21786 Brassica carinata HOM05D006619 ORTHO05D008351 3.5e-31 139.8 306 35.9
BolC9t55627H Brassica oleracea HOM05D006619 ORTHO05D008351 3.5e-31 139.8 306 35.9
BcaB07g30899 Brassica carinata HOM05D006619 ORTHO05D008351 4.5e-31 139.4 306 35.3
C09p27640 Brassica napus HOM05D006619 ORTHO05D008351 5.9e-31 139.0 306 35.9
BraA09t37763Z Brassica rapa HOM05D006619 ORTHO05D008351 5.9e-31 139.0 306 35.9
AT5G45310 Arabidopsis thaliana HOM05D006619 ORTHO05D008351 7.7e-31 138.7 328 36.0
A09p21640 Brassica napus HOM05D006619 ORTHO05D008351 1.3e-30 137.9 306 36.3
Thhalv10001132m.g Eutrema salsugineum HOM05D006619 ORTHO05D008351 1.7e-30 137.5 326 32.5
Aa31LG9G7710 Aethionema arabicum HOM05D006619 ORTHO05D008351 8.5e-30 135.2 294 38.8
SalBow1G1985 Salvia bowleyana HOM05D006619 ORTHO05D008351 1.1e-29 134.8 296 41.6
Cpa.g.sc137.4 Carica papaya HOM05D006619 ORTHO05D008351 3.2e-29 133.3 231 38.1
Carub.0008s0284 Capsella rubella HOM05D006619 ORTHO05D008351 4.2e-29 132.9 264 43.9
SalBow8G3333 Salvia bowleyana HOM05D006619 ORTHO05D008351 4.2e-29 132.9 296 41.2
Oeu045949.2 Olea europaea HOM05D006619 ORTHO05D008351 1.2e-28 131.3 104 62.5
SGA_v2.0_scaffold121G33054 Striga asiatica HOM05D006619 ORTHO05D008351 2.0e-26 124.0 279 33.7
SMO367G0687 Selaginella moellendorffii HOM05D003392 ORTHO05D003801 7.0e-24 115.5 272 34.6
AagrBONN_evm.TU.Sc2ySwM_117.1666 Anthoceros agrestis HOM05D006619 ORTHO05D008351 3.3e-21 106.7 88 60.2
AagrBONN_evm.TU.Sc2ySwM_344.2089 Anthoceros agrestis HOM05D006619 ORTHO05D008351 4.3e-21 106.3 88 59.1
Pp3c25_50 Physcomitrium patens HOM05D006619 ORTHO05D008351 3.0e-19 100.1 298 28.9
EL10Ac5g12596 Beta vulgaris HOM05D006619 ORTHO05D008351 1.5e-18 97.8 85 61.2
Zm00001eb140380 Zea mays HOM05D006619 ORTHO05D008351 3.4e-18 96.7 244 28.3
HPP92_015143 Vanilla planifolia HOM05D000346 ORTHO05D004932 9.8e-18 95.1 238 31.9
Os01g0962100 Oryza sativa ssp. japonica HOM05D006619 ORTHO05D008351 2.1e-12 77.4 212 26.9
QL12p003340 Quercus lobata HOM05D006619 ORTHO05D008351 5.2e-11 72.8 173 34.7
COL.COLO4_16514 Corchorus olitorius HOM05D006619 ORTHO05D008351 8.9e-11 72.0 235 32.3
MD16G1286500 Malus domestica HOM05D006619 ORTHO05D008351 2.9e-09 67.0 134 35.8


User provided reference genes

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