Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G0195 Cannabis sativa HOM05D000566 ORTHO05D008456 3.0e-108 395.2 201 100.0
Gohir.A06G134006 Gossypium hirsutum HOM05D000566 ORTHO05D008456 5.9e-64 248.1 191 69.6
Duzib192G0190 Durio zibethinus HOM05D000566 ORTHO05D008456 1.0e-63 247.3 201 70.6
FAN21G0306 Fragaria x ananassa HOM05D000566 ORTHO05D008456 1.0e-63 247.3 207 67.6
FAN25G1525 Fragaria x ananassa HOM05D000566 ORTHO05D000686 3.8e-63 245.4 165 77.6
Gohir.D06G136400 Gossypium hirsutum HOM05D000566 ORTHO05D008456 5.0e-63 245.0 190 69.5
Thecc.06G173200 Theobroma cacao HOM05D000566 ORTHO05D008456 5.0e-63 245.0 203 69.0
MELO3C007220.2 Cucumis melo HOM05D000566 ORTHO05D008456 6.6e-63 244.6 153 81.7
Atru.chr10.1700 Acer truncatum HOM05D000566 ORTHO05D008456 1.5e-62 243.4 180 71.7
Lalb_Chr16g0384251 Lupinus albus HOM05D000566 ORTHO05D008456 1.5e-62 243.4 156 80.8
Hund23960 Selenicereus undatus HOM05D000566 ORTHO05D008456 1.9e-62 243.0 203 68.5
RcHm_v2.0_Chr5g0010321 Rosa chinensis HOM05D000566 ORTHO05D008456 3.3e-62 242.3 207 66.7
Ciclev10016472m.g Citrus clementina HOM05D000566 ORTHO05D008456 4.2e-62 241.9 159 78.6
FvH4_3g07991 Fragaria vesca HOM05D000566 ORTHO05D008456 5.5e-62 241.5 205 67.3
Lalb_Chr05g0218771 Lupinus albus HOM05D000566 ORTHO05D008456 5.5e-62 241.5 153 81.0
Gorai.010G158600 Gossypium raimondii HOM05D000566 ORTHO05D008456 7.2e-62 241.1 190 68.4
Sc05g0007190 Simmondsia chinensis HOM05D000566 ORTHO05D008456 7.2e-62 241.1 192 67.7
Glyma.13G171000 Glycine max HOM05D000566 ORTHO05D008456 9.5e-62 240.7 145 87.6
Lj4g0018718 Lotus japonicus HOM05D000566 ORTHO05D008456 9.5e-62 240.7 197 68.5
COL.COLO4_31322 Corchorus olitorius HOM05D000566 ORTHO05D000686 1.2e-61 240.4 201 68.7
TAR626G0526 Trochodendron aralioides HOM05D000566 ORTHO05D008456 1.2e-61 240.4 192 68.2
FAN11G2813 Fragaria x ananassa HOM05D000566 ORTHO05D008456 1.6e-61 240.0 205 66.8
TWI38G1860 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 1.6e-61 240.0 197 68.0
Ca_26053_v3 Cicer arietinum L. HOM05D000566 ORTHO05D008456 2.1e-61 239.6 133 91.7
Manes.16G037200 Manihot esculenta HOM05D000566 ORTHO05D008456 3.6e-61 238.8 204 67.2
Potri.011G064600 Populus trichocarpa HOM05D000566 ORTHO05D008456 8.0e-61 237.7 196 67.3
Hma1.2p1_0437F.1_g152980 Hydrangea macrophylla HOM05D000566 ORTHO05D008456 1.4e-60 236.9 175 72.6
Psat7g118880 Pisum sativum HOM05D000566 ORTHO05D008456 1.8e-60 236.5 149 83.9
CiPaw.09G068300 Carya illinoinensis HOM05D000566 ORTHO05D008456 2.3e-60 236.1 206 67.5
TPR.G16280 Trifolium pratense HOM05D000566 ORTHO05D008456 3.0e-60 235.7 174 74.1
Phvul.003G058300 Phaseolus vulgaris HOM05D000566 ORTHO05D008456 5.2e-60 235.0 172 73.8
SGA_v2.0_scaffold1G00030 Striga asiatica HOM05D000566 ORTHO05D008456 5.2e-60 235.0 156 78.8
Migut.M01050 Erythranthe guttata HOM05D000566 ORTHO05D008456 8.9e-60 234.2 161 76.4
Oeu039926.1 Olea europaea HOM05D000566 ORTHO05D008456 1.5e-59 233.4 122 94.3
Cc02_g14640 Coffea canephora HOM05D000566 ORTHO05D008456 2.0e-59 233.0 122 93.4
Aqoxy1G03201 Aquilegia oxysepala HOM05D000566 ORTHO05D008456 2.6e-59 232.6 124 90.3
AUR62036584 Chenopodium quinoa HOM05D000566 ORTHO05D008456 2.6e-59 232.6 120 95.8
ClCG01G023650 Citrullus lanatus HOM05D000566 ORTHO05D008456 2.6e-59 232.6 172 73.3
Medtr4g087740 Medicago truncatula HOM05D000566 ORTHO05D008456 2.6e-59 232.6 139 84.9
Sed0006380 Sechium edule HOM05D000566 ORTHO05D008456 2.6e-59 232.6 155 78.7
THA.LOC104814247 Tarenaya hassleriana HOM05D000566 ORTHO05D008456 2.6e-59 232.6 155 75.5
Dinv04627 Davidia involucrata HOM05D000566 ORTHO05D008456 3.4e-59 232.3 144 80.6
Prupe.4G059300 Prunus persica HOM05D000566 ORTHO05D008456 3.4e-59 232.3 205 64.4
GSVIVG01021190001 Vitis vinifera HOM05D000566 ORTHO05D008456 4.4e-59 231.9 122 91.8
Cfa000591 Carpinus fangiana HOM05D000566 ORTHO05D008456 5.7e-59 231.5 198 67.7
Haze_06259 Corylus avellana HOM05D000566 ORTHO05D008456 5.7e-59 231.5 198 67.7
Eucgr.E02712 Eucalyptus grandis HOM05D000566 ORTHO05D008456 5.7e-59 231.5 206 67.5
QL05p046292 Quercus lobata HOM05D000566 ORTHO05D008456 5.7e-59 231.5 187 66.3
Sp1g24970 Schrenkiella parvula HOM05D000566 ORTHO05D008456 5.7e-59 231.5 190 66.3
Actinidia16807 Actinidia chinensis HOM05D000566 ORTHO05D008456 1.3e-58 230.3 139 81.3
Ah.09g233690 Amaranthus hybridus HOM05D000566 ORTHO05D008456 1.7e-58 229.9 197 65.5
Sabra11G0046400 Salix brachista HOM05D000566 ORTHO05D008456 1.7e-58 229.9 188 66.5
SalBow8G0706 Salvia bowleyana HOM05D000566 ORTHO05D008456 1.7e-58 229.9 179 72.1
VMungo0251G1655 Vigna mungo HOM05D000566 ORTHO05D008456 1.7e-58 229.9 165 73.3
Rhsim13G0191700 Rhododendron simsii HOM05D000566 ORTHO05D000686 2.8e-58 229.2 201 64.2
PGSC0003DMG401022314 Solanum tuberosum HOM05D000566 ORTHO05D008456 2.8e-58 229.2 122 91.0
MSTRG.7396 Avicennia marina HOM05D000566 ORTHO05D008456 4.9e-58 228.4 197 67.0
vmacro03936 Vaccinium macrocarpon HOM05D000566 ORTHO05D008456 4.9e-58 228.4 174 70.1
MD10G1282600 Malus domestica HOM05D000566 ORTHO05D008456 6.3e-58 228.0 182 68.7
Peaxi162Scf01479g00012 Petunia axillaris HOM05D000566 ORTHO05D008456 6.3e-58 228.0 144 81.2
DCAR_004017 Daucus carota HOM05D000566 ORTHO05D008456 8.3e-58 227.6 125 87.2
HanXRQChr07g0186931 Helianthus annuus HOM05D000566 ORTHO05D008456 1.1e-57 227.3 176 69.3
ECA234G0195 Erigeron canadensis HOM05D000566 ORTHO05D000686 1.8e-57 226.5 125 86.4
PGR042G3563 Punica granatum HOM05D000566 ORTHO05D008456 1.8e-57 226.5 182 65.4
CAN.G337.143 Capsicum annuum HOM05D000566 ORTHO05D008456 4.1e-57 225.3 122 90.2
Lsat_1_v5_gn_4_50020 Lactuca sativa HOM05D000566 ORTHO05D008456 5.4e-57 224.9 149 77.9
Medtr4g087750 Medicago truncatula HOM05D000566 ORTHO05D008456 7.0e-57 224.6 202 63.9
PSO541G3700 Papaver somniferum HOM05D000566 ORTHO05D008456 1.2e-56 223.8 189 64.6
PSO675G8854 Papaver somniferum HOM05D000566 ORTHO05D008456 1.2e-56 223.8 192 63.0
Sopen07g032890 Solanum pennellii HOM05D000566 ORTHO05D008456 1.2e-56 223.8 122 88.5
Thhalv10009067m.g Eutrema salsugineum HOM05D000566 ORTHO05D008456 1.6e-56 223.4 142 78.2
Solyc07g064690.1 Solanum lycopersicum HOM05D000566 ORTHO05D008456 1.6e-56 223.4 122 88.5
A07p11000 Brassica napus HOM05D000566 ORTHO05D008456 3.5e-56 222.2 156 71.8
BraA07t28892Z Brassica rapa HOM05D000566 ORTHO05D008456 3.5e-56 222.2 156 71.8
AT1G29040 Arabidopsis thaliana HOM05D000566 ORTHO05D008456 4.5e-56 221.9 206 62.1
CARHR028250 Cardamine hirsuta HOM05D000566 ORTHO05D008456 5.9e-56 221.5 201 61.7
unitig_699.g19342 Utricularia gibba HOM05D000566 ORTHO05D008456 1.0e-55 220.7 191 65.4
AL1G42750 Arabidopsis lyrata HOM05D000566 ORTHO05D008456 2.9e-55 219.2 142 76.1
Carub.0001s2723 Capsella rubella HOM05D000566 ORTHO05D008456 2.9e-55 219.2 142 76.8
Os01g0613300 Oryza sativa ssp. japonica HOM05D000566 ORTHO05D008456 5.0e-55 218.4 151 70.2
EL10Ac8g20507 Beta vulgaris HOM05D000566 ORTHO05D008456 8.6e-55 217.6 242 55.4
CDE02G2902 Ceratophyllum demersum HOM05D000566 ORTHO05D008456 3.3e-54 215.7 134 80.6
MBI06_g25985_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 3.3e-54 215.7 151 72.8
C07p16640 Brassica napus HOM05D000566 ORTHO05D008456 4.3e-54 215.3 191 61.3
BcaB03g13911 Brassica carinata HOM05D000566 ORTHO05D008456 7.3e-54 214.5 204 60.8
HPP92_024140 Vanilla planifolia HOM05D000566 ORTHO05D008456 9.5e-54 214.2 130 80.8
BcaC06g35392 Brassica carinata HOM05D000566 ORTHO05D008456 1.2e-53 213.8 192 62.5
BolC7t42164H Brassica oleracea HOM05D000566 ORTHO05D008456 1.6e-53 213.4 180 65.0
Lj2A297T108 Lonicera japonica HOM05D000566 ORTHO05D008456 2.3e-52 209.5 237 54.0
Zm00001eb162000 Zea mays HOM05D000566 ORTHO05D008456 3.1e-52 209.1 197 59.9
Nitab4.5_0000206g0050 Nicotiana tabacum HOM05D000566 ORTHO05D008456 6.8e-52 208.0 189 63.0
Pp3c23_18520 Physcomitrium patens HOM05D000566 ORTHO05D008456 4.4e-51 205.3 121 78.5
Peaxi162Scf01070g00226 Petunia axillaris HOM05D000566 ORTHO05D008456 9.8e-51 204.1 195 60.0
Pp3c24_14610 Physcomitrium patens HOM05D000566 ORTHO05D008456 8.3e-50 201.1 127 73.2
Glyma.13G170900 Glycine max HOM05D000566 ORTHO05D008456 1.1e-49 200.7 122 78.7
Aa31LG6G11510 Aethionema arabicum HOM05D000566 ORTHO05D008456 1.2e-48 197.2 216 56.0
AUR62031167 Chenopodium quinoa HOM05D000566 ORTHO05D008456 3.0e-47 192.6 99 96.0
VMungo0251G1536 Vigna mungo HOM05D000566 ORTHO05D008456 3.9e-47 192.2 133 68.4
ATR0602G168 Amborella trichopoda HOM05D000566 ORTHO05D008456 5.0e-47 191.8 198 59.6
Glyma.04G136400 Glycine max HOM05D000566 ORTHO05D008456 2.5e-46 189.5 122 73.8
arahy.Tifrunner.gnm1.ann1.AZL87G Arachis hypogaea HOM05D000566 ORTHO05D008456 1.5e-43 180.3 122 69.7
arahy.Tifrunner.gnm1.ann1.441UHN Arachis hypogaea HOM05D000566 ORTHO05D008456 3.4e-43 179.1 122 68.9
SEGI_28108 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 1.1e-41 174.1 122 66.4
AagrBONN_evm.TU.Sc2ySwM_344.3192 Anthoceros agrestis HOM05D000566 ORTHO05D008456 2.5e-38 162.9 106 73.6
CsaV3_6G050800 Cucumis sativus L. HOM05D000566 ORTHO05D008456 1.8e-36 156.8 140 63.6
Cpa.g.sc7.62 Carica papaya HOM05D000566 ORTHO05D008456 1.9e-33 146.7 101 72.3
Nn1g04373 Nelumbo nucifera HOM05D000566 ORTHO05D008456 1.9e-33 146.7 128 64.8
FAN16G3553 Fragaria x ananassa HOM05D000566 ORTHO05D008456 2.4e-33 146.4 157 58.6
Nitab4.5_0010317g0010 Nicotiana tabacum HOM05D000566 ORTHO05D008456 1.6e-32 143.7 220 44.5
TWI38G1453 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 7.3e-30 134.8 132 56.8
MCO02G300 Micromonas commoda HOM05D000566 ORTHO05D008456 7.6e-27 124.8 121 53.7
PRCOL_00004523 Prasinoderma coloniale HOM05D000566 ORTHO05D008456 1.5e-22 110.5 121 48.8
TWI38G2220 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 1.5e-22 110.5 152 47.4
Glyma.04G136500 Glycine max HOM05D000566 ORTHO05D008456 2.8e-21 106.3 71 71.8
CSS0045665 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 7.8e-16 88.2 45 91.1
SEGI_18524 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 1.9e-14 83.6 63 69.8
CSS0020746 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 4.3e-14 82.4 78 56.4
CSS0029795 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 4.3e-14 82.4 78 56.4
SEGI_06418 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 4.3e-14 82.4 61 67.2
Cpa.g.sc7.61 Carica papaya HOM05D000566 ORTHO05D008456 1.4e-12 77.4 37 94.6
Sed0003601 Sechium edule HOM05D000566 ORTHO05D008456 1.4e-12 77.4 114 43.9
SEGI_34869 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 1.6e-08 63.9 42 66.7
MBI06_g25984_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 3.0e-07 59.7 52 59.6


User provided reference genes

Program Settings