Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G0183 Cannabis sativa HOM05D008822 ORTHO05D003990 1.9e-280 968.8 560 100.0
Ca_26223_v3 Cicer arietinum L. HOM05D000651 ORTHO05D003990 2.3e-15 88.2 79 54.4
Ca_08976_v3 Cicer arietinum L. HOM05D000651 ORTHO05D003990 3.9e-15 87.4 79 53.2
Thecc.02G282500 Theobroma cacao HOM05D000651 ORTHO05D003990 6.6e-15 86.7 272 31.6
Lj4g0023305 Lotus japonicus HOM05D000651 ORTHO05D003990 5.6e-14 83.6 129 39.5
TPR.G31286 Trifolium pratense HOM05D000651 ORTHO05D003990 7.3e-14 83.2 80 50.0
Glyma.09G108100 Glycine max HOM05D000651 ORTHO05D003990 2.1e-13 81.6 75 52.0
TWI31G1292 Tripterygium wilfordii HOM05D000651 ORTHO05D003990 4.7e-13 80.5 76 51.3
arahy.Tifrunner.gnm1.ann1.1CZ7RW Arachis hypogaea HOM05D000651 ORTHO05D003990 6.2e-13 80.1 91 44.0
Medtr4g084700 Medicago truncatula HOM05D000651 ORTHO05D003990 1.4e-12 79.0 164 33.5
arahy.Tifrunner.gnm1.ann1.34Z3BG Arachis hypogaea HOM05D000651 ORTHO05D003990 2.4e-12 78.2 209 33.5
PGSC0003DMG402006007 Solanum tuberosum HOM05D000651 ORTHO05D003990 2.4e-12 78.2 122 36.1
TAR629G0208 Trochodendron aralioides HOM05D008822 ORTHO05D003990 3.1e-12 77.8 93 40.9
CSS0042175 Camellia sinensis var. sinensis HOM05D000651 ORTHO05D003990 4.0e-12 77.4 188 32.4
PGSC0003DMG401006007 Solanum tuberosum HOM05D000651 ORTHO05D003990 4.0e-12 77.4 122 35.2
Peaxi162Scf00253g01127 Petunia axillaris HOM05D000651 ORTHO05D003990 5.2e-12 77.0 127 37.8
Actinidia04066 Actinidia chinensis HOM05D000896 ORTHO05D000594 6.8e-12 76.6 209 34.4
Glyma.07G218500 Glycine max HOM05D000651 ORTHO05D003990 6.8e-12 76.6 124 37.9
Sopen11g008640 Solanum pennellii HOM05D000651 ORTHO05D003990 6.8e-12 76.6 127 35.4
Sopen11g008650 Solanum pennellii HOM05D000651 ORTHO05D003990 6.8e-12 76.6 111 38.7
Dinv07655 Davidia involucrata HOM05D000651 ORTHO05D003990 8.9e-12 76.3 135 37.0
RcHm_v2.0_Chr7g0206321 Rosa chinensis HOM05D015272 ORTHO05D022694 8.9e-12 76.3 92 42.4
CAN.G698.4 Capsicum annuum HOM05D000651 ORTHO05D003990 1.2e-11 75.9 126 35.7
Nitab4.5_0007504g0010 Nicotiana tabacum HOM05D000651 ORTHO05D003990 1.2e-11 75.9 104 42.3
Medtr1g048840 Medicago truncatula HOM05D000651 ORTHO05D003990 1.5e-11 75.5 79 49.4
Manes.17G077833 Manihot esculenta HOM05D000651 ORTHO05D003990 2.0e-11 75.1 217 31.8
Sopen10g027670 Solanum pennellii HOM05D000651 ORTHO05D003990 2.0e-11 75.1 118 38.1
TPR.G29102 Trifolium pratense HOM05D000651 ORTHO05D003990 2.6e-11 74.7 80 50.0
Ah.04g154370 Amaranthus hybridus HOM05D000294 ORTHO05D003990 4.4e-11 73.9 105 39.0
BraA10t44850Z Brassica rapa HOM05D008822 ORTHO05D003990 4.4e-11 73.9 82 50.0
Ciclev10015830m.g Citrus clementina HOM05D000651 ORTHO05D003990 4.4e-11 73.9 231 30.3
Manes.17G077700 Manihot esculenta HOM05D000651 ORTHO05D003990 4.4e-11 73.9 242 30.6
Solyc11g013590.1 Solanum lycopersicum HOM05D000651 ORTHO05D003990 4.4e-11 73.9 121 35.5
arahy.Tifrunner.gnm1.ann1.7T6UUP Arachis hypogaea HOM05D000651 ORTHO05D003435 5.8e-11 73.6 209 33.0
unitig_0.g2324 Utricularia gibba HOM05D000651 ORTHO05D003990 7.6e-11 73.2 112 37.5
Nitab4.5_0000926g0060 Nicotiana tabacum HOM05D000651 ORTHO05D003990 9.9e-11 72.8 103 39.8
CSS0020544 Camellia sinensis var. sinensis HOM05D000651 ORTHO05D003990 1.3e-10 72.4 188 30.9
Duzib251G0891 Durio zibethinus HOM05D000651 ORTHO05D003990 1.3e-10 72.4 235 31.9
Sopen10g027700 Solanum pennellii HOM05D000651 ORTHO05D003990 1.3e-10 72.4 118 35.6
Nitab4.5_0000426g0240 Nicotiana tabacum HOM05D000651 ORTHO05D003990 1.7e-10 72.0 104 41.3
Phvul.002G094900 Phaseolus vulgaris HOM05D000651 ORTHO05D003990 1.7e-10 72.0 79 45.6
Solyc11g013580.1 Solanum lycopersicum HOM05D000651 ORTHO05D003990 1.7e-10 72.0 111 36.9
arahy.Tifrunner.gnm1.ann1.DY9A0E Arachis hypogaea HOM05D000651 ORTHO05D003990 2.2e-10 71.6 210 30.0
Sopen10g027660 Solanum pennellii HOM05D000002 ORTHO05D003990 2.9e-10 71.2 118 36.4
AUR62032767 Chenopodium quinoa HOM05D008822 ORTHO05D003990 6.4e-10 70.1 128 32.0
Solyc04g007720.3 Solanum lycopersicum HOM05D000651 ORTHO05D003990 6.4e-10 70.1 108 35.2
Medtr4g019680 Medicago truncatula HOM05D000651 ORTHO05D003990 8.4e-10 69.7 76 46.1
Eucgr.J02425 Eucalyptus grandis HOM05D000651 ORTHO05D003990 1.1e-09 69.3 276 27.2
PSO017G3155 Papaver somniferum HOM05D008822 ORTHO05D003990 1.1e-09 69.3 73 45.2
MD13G1024700 Malus domestica HOM05D000651 ORTHO05D003990 1.4e-09 68.9 266 28.9
TPR.G38350 Trifolium pratense HOM05D000651 ORTHO05D003990 1.4e-09 68.9 257 30.0
DCAR_007298 Daucus carota HOM05D008822 ORTHO05D003990 1.9e-09 68.6 216 28.2
Duzib248G1110 Durio zibethinus HOM05D000651 ORTHO05D003990 1.9e-09 68.6 287 27.9
Nitab4.5_0007359g0040 Nicotiana tabacum HOM05D000651 ORTHO05D003990 1.9e-09 68.6 78 46.2
Solyc11g013630.1 Solanum lycopersicum HOM05D000651 ORTHO05D003990 1.9e-09 68.6 121 33.9
AUR62042685 Chenopodium quinoa HOM05D008822 ORTHO05D003990 2.4e-09 68.2 130 33.8
Sopen04g002810 Solanum pennellii HOM05D000651 ORTHO05D003990 2.4e-09 68.2 108 35.2
Eucgr.J02424 Eucalyptus grandis HOM05D008822 ORTHO05D003990 4.2e-09 67.4 64 54.7
Psat7g128680 Pisum sativum HOM05D000651 ORTHO05D003990 5.4e-09 67.0 320 25.3
TPR.G19130 Trifolium pratense HOM05D000651 ORTHO05D003990 5.4e-09 67.0 74 51.4
SGA_v2.0_scaffold39G15180 Striga asiatica HOM05D000651 ORTHO05D003990 7.1e-09 66.6 166 30.7
AUR62038081 Chenopodium quinoa HOM05D000294 ORTHO05D003990 9.2e-09 66.2 95 36.8
MELO3C005307.2 Cucumis melo HOM05D021888 ORTHO05D003990 1.2e-08 65.9 164 34.8
Medtr7g106530 Medicago truncatula HOM05D000651 ORTHO05D003990 1.2e-08 65.9 76 43.4
Prupe.5G053600 Prunus persica HOM05D015272 ORTHO05D003990 1.2e-08 65.9 223 30.5
Sopen11g008610 Solanum pennellii HOM05D000651 ORTHO05D003990 1.2e-08 65.9 212 28.8
arahy.Tifrunner.gnm1.ann1.58UXC0 Arachis hypogaea HOM05D000651 ORTHO05D003990 1.6e-08 65.5 313 29.1
HanXRQChr15g0476841 Helianthus annuus HOM05D008822 ORTHO05D003990 1.6e-08 65.5 69 42.0
Peaxi162Scf00047g00334 Petunia axillaris HOM05D000651 ORTHO05D003990 1.6e-08 65.5 138 33.3
Aqoxy7G03756 Aquilegia oxysepala HOM05D000294 ORTHO05D003990 2.7e-08 64.7 77 40.3
AUR62038169 Chenopodium quinoa HOM05D008822 ORTHO05D003990 2.7e-08 64.7 64 45.3
Hund01243 Selenicereus undatus HOM05D008822 ORTHO05D003990 4.6e-08 63.9 292 26.7
Solyc11g013680.1 Solanum lycopersicum HOM05D000651 ORTHO05D003990 4.6e-08 63.9 119 35.3
SGA_v2.0_scaffold50G18496 Striga asiatica HOM05D008822 ORTHO05D003990 4.6e-08 63.9 65 47.7
CSS0040679 Camellia sinensis var. sinensis HOM05D000651 ORTHO05D003990 6.0e-08 63.5 272 28.3
MD06G1045800 Malus domestica HOM05D015272 ORTHO05D003990 6.0e-08 63.5 322 23.9
QL10p040527 Quercus lobata HOM05D015316 ORTHO05D003990 7.8e-08 63.2 168 33.9
EL10Ac1g00119 Beta vulgaris HOM05D000294 ORTHO05D003990 1.0e-07 62.8 165 30.9
CSS0022216 Camellia sinensis var. sinensis HOM05D000651 ORTHO05D003990 1.0e-07 62.8 273 26.7
Lsat_1_v5_gn_3_55381 Lactuca sativa HOM05D008822 ORTHO05D003990 1.0e-07 62.8 69 40.6
ClCG01G006200 Citrullus lanatus HOM05D021888 ORTHO05D003990 1.3e-07 62.4 195 33.8
COL.COLO4_20494 Corchorus olitorius HOM05D000651 ORTHO05D003990 1.3e-07 62.4 258 26.7
Solyc11g013600.2 Solanum lycopersicum HOM05D000651 ORTHO05D003990 1.3e-07 62.4 111 36.0
Rhsim09G0066300 Rhododendron simsii HOM05D000651 ORTHO05D003990 1.7e-07 62.0 136 34.6
QL10p028121 Quercus lobata HOM05D008822 ORTHO05D003990 2.3e-07 61.6 66 47.0
Actinidia14976 Actinidia chinensis HOM05D000651 ORTHO05D003990 3.0e-07 61.2 191 30.4
TPR.G32510 Trifolium pratense HOM05D000651 ORTHO05D003990 3.0e-07 61.2 97 42.3
arahy.Tifrunner.gnm1.ann1.FQ9DWZ Arachis hypogaea HOM05D000651 ORTHO05D003990 3.9e-07 60.8 62 51.6
MD14G1235000 Malus domestica HOM05D003305 ORTHO05D001298 3.9e-07 60.8 87 37.9
HanXRQChr15g0476831 Helianthus annuus HOM05D000651 ORTHO05D003990 5.1e-07 60.5 314 26.1
TPR.G19120 Trifolium pratense HOM05D000651 ORTHO05D003990 5.1e-07 60.5 100 41.0
Cc11_g08580 Coffea canephora HOM05D000651 ORTHO05D003990 6.6e-07 60.1 171 30.4
Migut.E00431 Erythranthe guttata HOM05D000651 ORTHO05D003990 6.6e-07 60.1 169 29.6
BcaB08g37226 Brassica carinata HOM05D008822 ORTHO05D003990 8.7e-07 59.7 228 31.6
DCAR_014730 Daucus carota HOM05D003305 ORTHO05D001298 8.7e-07 59.7 109 35.8
Dinv14425 Davidia involucrata HOM05D008822 ORTHO05D003990 8.7e-07 59.7 64 45.3
TAR622G0364 Trochodendron aralioides HOM05D003305 ORTHO05D001298 8.7e-07 59.7 83 42.2
TAR622G1365 Trochodendron aralioides HOM05D003305 ORTHO05D001298 8.7e-07 59.7 83 42.2
arahy.Tifrunner.gnm1.ann1.ZQQT14 Arachis hypogaea HOM05D000651 ORTHO05D003990 1.5e-06 58.9 81 42.0
Gorai.012G181100 Gossypium raimondii HOM05D000651 ORTHO05D003990 1.5e-06 58.9 268 30.6
Sc04g0005050 Simmondsia chinensis HOM05D000651 ORTHO05D003990 1.5e-06 58.9 260 28.8
THA.LOC104800215 Tarenaya hassleriana HOM05D008822 ORTHO05D003990 3.3e-06 57.8 257 29.2
vmacro00413 Vaccinium macrocarpon HOM05D008822 ORTHO05D003990 3.3e-06 57.8 223 28.3
Lsat_1_v5_gn_3_55361 Lactuca sativa HOM05D000651 ORTHO05D003990 5.6e-06 57.0 266 29.3
Aqoxy3G02485 Aquilegia oxysepala HOM05D000651 ORTHO05D003990 7.3e-06 56.6 85 37.6
Carub.0006s0775 Capsella rubella HOM05D008822 ORTHO05D003990 7.3e-06 56.6 270 30.4
DCAR_007300 Daucus carota HOM05D002189 ORTHO05D002233 7.3e-06 56.6 86 34.9
Migut.D01563 Erythranthe guttata HOM05D003305 ORTHO05D001298 7.3e-06 56.6 103 34.0
Gohir.D04G187300 Gossypium hirsutum HOM05D000651 ORTHO05D003990 7.3e-06 56.6 268 30.2
PSO017G4429 Papaver somniferum HOM05D003305 ORTHO05D001298 9.6e-06 56.2 115 33.0
PGSC0003DMG402005954 Solanum tuberosum HOM05D000651 ORTHO05D003990 9.6e-06 56.2 209 27.3


User provided reference genes

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