Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 5.8e-73 277.7 166 100.0
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 2.0e-25 119.8 138 55.1
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 2.6e-25 119.4 138 54.3
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 2.6e-25 119.4 129 51.2
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 5.8e-25 118.2 138 53.6
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 1.7e-24 116.7 135 48.9
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 8.4e-24 114.4 145 49.0
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 7.1e-23 111.3 150 44.0
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 7.1e-23 111.3 144 54.9
Manes.06G068200 Manihot esculenta HOM05D005932 ORTHO05D006213 1.3e-21 107.1 136 52.9
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 6.7e-21 104.8 137 43.8
RcHm_v2.0_Chr5g0016051 Rosa chinensis HOM05D005932 ORTHO05D006213 8.7e-21 104.4 138 60.9
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 1.5e-20 103.6 126 51.6
Cfa000817 Carpinus fangiana HOM05D005932 ORTHO05D006213 3.3e-20 102.4 131 58.0
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 4.3e-20 102.1 142 47.2
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 3.7e-19 99.0 152 42.8
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.1e-18 97.4 145 42.8
FAN11G2171 Fragaria x ananassa HOM05D005932 ORTHO05D006213 1.8e-18 96.7 139 48.2
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 4.1e-18 95.5 143 42.0
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 5.3e-18 95.1 167 38.9
Eucgr.D00155 Eucalyptus grandis HOM05D005932 ORTHO05D006213 1.2e-17 94.0 139 47.5
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 1.2e-17 94.0 135 42.2
Haze_05823 Corylus avellana HOM05D005932 ORTHO05D006213 1.5e-17 93.6 138 55.8
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 1.5e-17 93.6 144 42.4
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 3.4e-17 92.4 137 42.3
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 3.4e-17 92.4 148 41.9
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 4.5e-17 92.0 128 43.8
FvH4_3g10110 Fragaria vesca HOM05D005932 ORTHO05D006213 1.3e-16 90.5 139 47.5
FAN21G2441 Fragaria x ananassa HOM05D005932 ORTHO05D006213 1.3e-16 90.5 144 45.1
Manes.05G115000 Manihot esculenta HOM05D005932 ORTHO05D006213 1.3e-16 90.5 144 39.6
Duzib192G0542 Durio zibethinus HOM05D005932 ORTHO05D006213 2.2e-16 89.7 126 43.7
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 2.2e-16 89.7 141 39.7
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 8.5e-16 87.8 136 48.5
Glyma.05G166000 Glycine max HOM05D005932 ORTHO05D006213 1.4e-15 87.0 132 42.4
Sabra11G0088800 Salix brachista HOM05D005932 ORTHO05D006213 1.4e-15 87.0 148 42.6
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 1.9e-15 86.7 133 40.6
Eucgr.D00169 Eucalyptus grandis HOM05D005932 ORTHO05D006213 1.9e-15 86.7 136 44.1
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 5.5e-15 85.1 129 45.0
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 9.4e-15 84.3 118 42.4
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 1.6e-14 83.6 133 37.6
PGR083G0615 Punica granatum HOM05D005932 ORTHO05D006213 1.6e-14 83.6 160 43.1
Nitab4.5_0005178g0030 Nicotiana tabacum HOM05D005932 ORTHO05D006213 2.1e-14 83.2 143 37.1
Lj2P330T27 Lonicera japonica HOM05D005932 ORTHO05D006213 3.6e-14 82.4 122 42.6
Potri.011G095000 Populus trichocarpa HOM05D005932 ORTHO05D006213 4.6e-14 82.0 150 40.0
MBI18_g11291_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 6.1e-14 81.6 136 36.0
CiPaw.10G109100 Carya illinoinensis HOM05D005932 ORTHO05D006213 1.0e-13 80.9 157 44.6
Lj4g0014090 Lotus japonicus HOM05D005932 ORTHO05D006213 1.8e-13 80.1 136 39.7
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 3.0e-13 79.3 131 42.7
SGA_v2.0_scaffold223G42865 Striga asiatica HOM05D005932 ORTHO05D006213 3.0e-13 79.3 133 41.4
Glyma.08G124100 Glycine max HOM05D005932 ORTHO05D006213 3.9e-13 79.0 134 39.6
Lj1P1161T30 Lonicera japonica HOM05D005932 ORTHO05D006213 6.7e-13 78.2 124 42.7
Nitab4.5_0004734g0050 Nicotiana tabacum HOM05D005932 ORTHO05D006213 6.7e-13 78.2 130 36.9
Solyc02g024010.1 Solanum lycopersicum HOM05D005932 ORTHO05D006213 8.8e-13 77.8 137 38.7
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 8.8e-13 77.8 147 38.8
TPR.G6729 Trifolium pratense HOM05D005932 ORTHO05D006213 1.1e-12 77.4 137 35.0
PGSC0003DMG400011812 Solanum tuberosum HOM05D005932 ORTHO05D006213 1.5e-12 77.0 151 37.1
MSTRG.13271 Avicennia marina HOM05D005932 ORTHO05D006213 2.0e-12 76.6 154 35.1
Migut.M01897 Erythranthe guttata HOM05D005932 ORTHO05D006213 2.0e-12 76.6 134 38.1
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 2.0e-12 76.6 130 42.3
MSTRG.16291 Avicennia marina HOM05D005932 ORTHO05D006213 2.5e-12 76.3 143 37.8
Dinv04757 Davidia involucrata HOM05D005932 ORTHO05D006213 4.3e-12 75.5 122 40.2
Actinidia31387 Actinidia chinensis HOM05D005932 ORTHO05D006213 5.7e-12 75.1 139 37.4
Medtr8g088330 Medicago truncatula HOM05D005932 ORTHO05D006213 1.3e-11 73.9 133 36.8
Sp7g19900 Schrenkiella parvula HOM05D005932 ORTHO05D006213 1.3e-11 73.9 141 39.0
C07p51350 Brassica napus HOM05D005932 ORTHO05D006213 1.7e-11 73.6 131 35.1
Phvul.006G128300 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 1.7e-11 73.6 132 37.1
SGA_v2.0_scaffold1G00270 Striga asiatica HOM05D005932 ORTHO05D006213 2.8e-11 72.8 141 38.3
MELO3C007074.2 Cucumis melo HOM05D005932 ORTHO05D006213 3.7e-11 72.4 154 38.3
Sopen02g006750 Solanum pennellii HOM05D005932 ORTHO05D006213 3.7e-11 72.4 137 38.7
ClCG01G025150 Citrullus lanatus HOM05D005932 ORTHO05D006213 4.8e-11 72.0 134 38.8
SalBow8G0055 Salvia bowleyana HOM05D005932 ORTHO05D006213 4.8e-11 72.0 138 40.6
BcaC06g30675 Brassica carinata HOM05D005932 ORTHO05D006213 6.3e-11 71.6 131 35.9
A03p52900 Brassica napus HOM05D005932 ORTHO05D006213 8.2e-11 71.2 141 33.3
Potri.001G371800 Populus trichocarpa HOM05D005932 ORTHO05D006213 1.1e-10 70.9 115 48.7
BcaNung00838 Brassica carinata HOM05D005932 ORTHO05D006213 1.8e-10 70.1 140 32.9
BcaNung00840 Brassica carinata HOM05D005932 ORTHO05D006213 1.8e-10 70.1 140 32.9
BolC7t45634H Brassica oleracea HOM05D005932 ORTHO05D006213 1.8e-10 70.1 140 32.9
BraA03t14366Z Brassica rapa HOM05D005932 ORTHO05D006213 1.8e-10 70.1 141 32.6
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 2.4e-10 69.7 142 33.1
Nitab4.5_0004615g0090 Nicotiana tabacum HOM05D005932 ORTHO05D006213 3.1e-10 69.3 123 38.2
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 3.1e-10 69.3 128 40.6
Psat7g064920 Pisum sativum HOM05D005932 ORTHO05D006213 4.1e-10 68.9 131 35.1
Rhsim02G0161400 Rhododendron simsii HOM05D005932 ORTHO05D006213 1.2e-09 67.4 130 30.8
Lsat_1_v5_gn_2_93200 Lactuca sativa HOM05D005932 ORTHO05D006213 2.0e-09 66.6 136 36.0
Lj6g0008899 Lotus japonicus HOM05D005932 ORTHO05D006213 2.0e-09 66.6 132 38.6
Peaxi162Scf00395g00004 Petunia axillaris HOM05D005932 ORTHO05D006213 2.0e-09 66.6 130 32.3
Sp1g26360 Schrenkiella parvula HOM05D012212 ORTHO05D006213 2.0e-09 66.6 161 34.8
QL05p061901 Quercus lobata HOM05D005932 ORTHO05D006213 2.6e-09 66.2 133 44.4
FAN16G0402 Fragaria x ananassa HOM05D005932 ORTHO05D006213 3.4e-09 65.9 140 40.7
Medtr2g030220 Medicago truncatula HOM05D005932 ORTHO05D006213 3.4e-09 65.9 135 45.2
Sopen02g019050 Solanum pennellii HOM05D005932 ORTHO05D006213 3.4e-09 65.9 153 35.3
AL7G32200 Arabidopsis lyrata HOM05D005932 ORTHO05D006213 4.5e-09 65.5 148 36.5
Actinidia32363 Actinidia chinensis HOM05D005932 ORTHO05D006213 5.9e-09 65.1 127 33.9
unitig_92.g28172 Utricularia gibba HOM05D005932 ORTHO05D006213 7.7e-09 64.7 135 34.8
AT4G21740 Arabidopsis thaliana HOM05D005932 ORTHO05D006213 1.0e-08 64.3 143 38.5
Cpa.g.sc166.34 Carica papaya HOM05D005932 ORTHO05D006213 1.3e-08 63.9 123 35.8
unitig_37.g12073 Utricularia gibba HOM05D005932 ORTHO05D006213 1.7e-08 63.5 145 35.9
THA.LOC104798624 Tarenaya hassleriana HOM05D012212 ORTHO05D006213 2.2e-08 63.2 137 36.5
MELO3C002809.2 Cucumis melo HOM05D005932 ORTHO05D006213 6.5e-08 61.6 102 39.2
Thhalv10009012m.g Eutrema salsugineum HOM05D012212 ORTHO05D006213 6.5e-08 61.6 139 35.3
Psat1g167520 Pisum sativum HOM05D005932 ORTHO05D006213 6.5e-08 61.6 132 35.6
TPR.G26337 Trifolium pratense HOM05D005932 ORTHO05D006213 6.5e-08 61.6 124 46.8
Nn3g20198 Nelumbo nucifera HOM05D005932 ORTHO05D006213 8.5e-08 61.2 139 32.4
Lalb_Chr18g0057981 Lupinus albus HOM05D005932 ORTHO05D006213 1.1e-07 60.8 136 34.6
CARHR228470 Cardamine hirsuta HOM05D005932 ORTHO05D006213 1.4e-07 60.5 139 34.5
Aa31LG6G3710 Aethionema arabicum HOM05D005932 ORTHO05D006213 3.2e-07 59.3 140 35.0
BcaB07g32687 Brassica carinata HOM05D012212 ORTHO05D006213 3.2e-07 59.3 143 34.3
C05p29520 Brassica napus HOM05D012212 ORTHO05D006213 3.2e-07 59.3 143 34.3
BolC5t31682H Brassica oleracea HOM05D012212 ORTHO05D006213 3.2e-07 59.3 143 34.3
CsaV3_6G052360 Cucumis sativus L. HOM05D005932 ORTHO05D006213 3.2e-07 59.3 132 37.1
FAN25G3656 Fragaria x ananassa HOM05D005932 ORTHO05D006213 4.2e-07 58.9 115 40.9
Migut.H01328 Erythranthe guttata HOM05D005932 ORTHO05D006213 5.5e-07 58.5 148 29.1
Aa31LG6G11760 Aethionema arabicum HOM05D012212 ORTHO05D006213 9.4e-07 57.8 137 39.4
PGSC0003DMG400021122 Solanum tuberosum HOM05D005932 ORTHO05D006213 9.4e-07 57.8 148 33.1
AL1G44550 Arabidopsis lyrata HOM05D012212 ORTHO05D006213 1.2e-06 57.4 139 40.3
A09p35930 Brassica napus HOM05D012212 ORTHO05D006213 1.2e-06 57.4 140 32.1
Eucgr.E02504 Eucalyptus grandis HOM05D005932 ORTHO05D006213 1.6e-06 57.0 133 46.6
AL7G31630 Arabidopsis lyrata HOM05D005932 ORTHO05D006213 2.1e-06 56.6 150 42.7
BcaB07g32663 Brassica carinata HOM05D012212 ORTHO05D006213 2.1e-06 56.6 137 35.0
Glyma.09G024200 Glycine max HOM05D005932 ORTHO05D006213 2.1e-06 56.6 153 35.9
TWI63G1224 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 2.7e-06 56.2 119 33.6
Lalb_Chr07g0185951 Lupinus albus HOM05D005932 ORTHO05D006213 4.7e-06 55.5 144 33.3
BraA09t39118Z Brassica rapa HOM05D012212 ORTHO05D006213 6.1e-06 55.1 142 33.8
Carub.0007s1967 Capsella rubella HOM05D005932 ORTHO05D006213 6.1e-06 55.1 122 36.9
MBI02_g25782_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 6.1e-06 55.1 141 34.0
THA.LOC104806292 Tarenaya hassleriana HOM05D001059 ORTHO05D000873 6.1e-06 55.1 158 29.1


User provided reference genes

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