Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G0095 Cannabis sativa HOM05D007416 ORTHO05D009329 4.3e-57 224.6 122 100.0
Prupe.4G055000 Prunus persica HOM05D007416 ORTHO05D009329 3.5e-35 151.8 125 61.6
Manes.17G051100 Manihot esculenta HOM05D007416 ORTHO05D009329 1.1e-33 146.7 117 59.0
Potri.004G051300 Populus trichocarpa HOM05D007416 ORTHO05D009329 9.6e-33 143.7 121 60.3
ClCG01G023400 Citrullus lanatus HOM05D007416 ORTHO05D009329 4.0e-31 138.3 112 60.7
MELO3C007245.2 Cucumis melo HOM05D007416 ORTHO05D009329 4.0e-31 138.3 90 72.2
CsaV3_6G050530 Cucumis sativus L. HOM05D007416 ORTHO05D009329 5.2e-31 137.9 90 72.2
Dinv17369 Davidia involucrata HOM05D007416 ORTHO05D009329 5.2e-31 137.9 96 66.7
Cpa.g.sc7.10 Carica papaya HOM05D007416 ORTHO05D009329 8.9e-31 137.1 82 74.4
TWI63G0778 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 8.9e-31 137.1 118 54.2
PGSC0003DMG400022819 Solanum tuberosum HOM05D007416 ORTHO05D009329 1.5e-30 136.3 110 59.1
Aqoxy1G02242 Aquilegia oxysepala HOM05D007416 ORTHO05D009329 4.4e-30 134.8 116 58.6
CAN.G361.15 Capsicum annuum HOM05D007416 ORTHO05D009329 1.7e-29 132.9 121 54.5
Haze_06330 Corylus avellana HOM05D007416 ORTHO05D009329 2.2e-29 132.5 83 73.5
Nitab4.5_0002114g0110 Nicotiana tabacum HOM05D007416 ORTHO05D009329 2.9e-29 132.1 120 56.7
Nitab4.5_0014582g0020 Nicotiana tabacum HOM05D007416 ORTHO05D009329 3.8e-29 131.7 120 56.7
Solyc10g008850.2 Solanum lycopersicum HOM05D007416 ORTHO05D009329 4.9e-29 131.3 66 83.3
Sopen10g004640 Solanum pennellii HOM05D007416 ORTHO05D009329 4.9e-29 131.3 66 83.3
TWI38G0960 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 1.1e-28 130.2 122 52.5
Cfa000548 Carpinus fangiana HOM05D007416 ORTHO05D009329 1.4e-28 129.8 83 71.1
Gorai.005G035900 Gossypium raimondii HOM05D007416 ORTHO05D009329 1.9e-28 129.4 105 62.9
TAR627G0809 Trochodendron aralioides HOM05D003433 ORTHO05D003921 1.9e-28 129.4 74 78.4
Ciclev10017211m.g Citrus clementina HOM05D007416 ORTHO05D009329 2.4e-28 129.0 83 68.7
HanXRQChr14g0454031 Helianthus annuus HOM05D007416 ORTHO05D009329 2.4e-28 129.0 73 72.6
Thecc.06G178300 Theobroma cacao HOM05D007416 ORTHO05D009329 2.4e-28 129.0 113 57.5
Gohir.A02G025200 Gossypium hirsutum HOM05D007416 ORTHO05D009329 5.4e-28 127.9 105 61.9
Gohir.D02G032400 Gossypium hirsutum HOM05D007416 ORTHO05D009329 5.4e-28 127.9 105 61.9
Peaxi162Scf00248g00011 Petunia axillaris HOM05D007416 ORTHO05D009329 5.4e-28 127.9 65 84.6
CSS0002821 Camellia sinensis var. sinensis HOM05D007416 ORTHO05D009329 7.1e-28 127.5 88 64.8
Nn1g06362 Nelumbo nucifera HOM05D007416 ORTHO05D009329 7.1e-28 127.5 65 84.6
CiPaw.10G054100 Carya illinoinensis HOM05D007416 ORTHO05D009329 9.3e-28 127.1 82 69.5
AUR62031108 Chenopodium quinoa HOM05D007416 ORTHO05D009329 9.3e-28 127.1 118 55.1
Hma1.2p1_1465F.1_g285370 Hydrangea macrophylla HOM05D007416 ORTHO05D009329 1.2e-27 126.7 85 65.9
MD10G1286700 Malus domestica HOM05D007416 ORTHO05D009329 1.6e-27 126.3 99 58.6
Lsat_1_v5_gn_1_119080 Lactuca sativa HOM05D007416 ORTHO05D009329 2.1e-27 125.9 89 66.3
THA.LOC104812624 Tarenaya hassleriana HOM05D007416 ORTHO05D009329 2.1e-27 125.9 75 74.7
SGA_v2.0_scaffold16G07657 Striga asiatica HOM05D007416 ORTHO05D009329 2.7e-27 125.6 74 77.0
FAN21G3844 Fragaria x ananassa HOM05D007416 ORTHO05D009329 3.5e-27 125.2 84 66.7
Migut.M01088 Erythranthe guttata HOM05D007416 ORTHO05D009329 4.6e-27 124.8 112 56.2
Sed0002237 Sechium edule HOM05D007416 ORTHO05D009329 4.6e-27 124.8 94 61.7
COL.COLO4_31395 Corchorus olitorius HOM05D007416 ORTHO05D009329 6.0e-27 124.4 82 68.3
FAN25G0684 Fragaria x ananassa HOM05D007416 ORTHO05D009329 6.0e-27 124.4 69 82.6
QL05p043606 Quercus lobata HOM05D007416 ORTHO05D009329 7.8e-27 124.0 95 61.1
RcHm_v2.0_Chr5g0009671 Rosa chinensis HOM05D007416 ORTHO05D009329 7.8e-27 124.0 72 77.8
SGA_v2.0_scaffold309G48156 Striga asiatica HOM05D007416 ORTHO05D009329 7.8e-27 124.0 67 79.1
Atru.chr10.1755 Acer truncatum HOM05D007416 ORTHO05D009329 1.3e-26 123.2 125 56.0
AUR62014900 Chenopodium quinoa HOM05D007416 ORTHO05D009329 1.3e-26 123.2 118 54.2
FvH4_3g08330 Fragaria vesca HOM05D007416 ORTHO05D009329 1.3e-26 123.2 84 69.0
HPP92_005210 Vanilla planifolia HOM05D007416 ORTHO05D009329 1.3e-26 123.2 115 54.8
Oeu012170.1 Olea europaea HOM05D007416 ORTHO05D009329 1.7e-26 122.9 60 85.0
PSO675G1239 Papaver somniferum HOM05D007416 ORTHO05D009329 1.7e-26 122.9 118 52.5
A08p25450 Brassica napus HOM05D007416 ORTHO05D009329 2.3e-26 122.5 86 68.6
Eucgr.D00578 Eucalyptus grandis HOM05D007416 ORTHO05D009329 2.3e-26 122.5 85 64.7
FAN16G3750 Fragaria x ananassa HOM05D007416 ORTHO05D009329 2.3e-26 122.5 80 72.5
C03p75360 Brassica napus HOM05D007416 ORTHO05D009329 3.0e-26 122.1 71 77.5
Carub.0001s2700 Capsella rubella HOM05D007416 ORTHO05D009329 3.0e-26 122.1 85 69.4
unitig_8.g4633 Utricularia gibba HOM05D007416 ORTHO05D009329 3.9e-26 121.7 80 71.2
unitig_8.g4637 Utricularia gibba HOM05D007416 ORTHO05D009329 3.9e-26 121.7 80 71.2
unitig_8.g4657 Utricularia gibba HOM05D004204 ORTHO05D005069 5.1e-26 121.3 77 74.0
BcaC01g00068 Brassica carinata HOM05D007416 ORTHO05D009329 6.6e-26 120.9 86 67.4
BraA08t34496Z Brassica rapa HOM05D007416 ORTHO05D009329 6.6e-26 120.9 78 73.1
CDE05G1837 Ceratophyllum demersum HOM05D007416 ORTHO05D009329 6.6e-26 120.9 66 77.3
BolC3t19794H Brassica oleracea HOM05D007416 ORTHO05D009329 8.7e-26 120.6 71 76.1
Thhalv10009143m.g Eutrema salsugineum HOM05D007416 ORTHO05D009329 8.7e-26 120.6 88 64.8
Cc02_g14200 Coffea canephora HOM05D007416 ORTHO05D009329 1.1e-25 120.2 77 68.8
ECA234G4626 Erigeron canadensis HOM05D007416 ORTHO05D009329 1.1e-25 120.2 105 57.1
PGR004G2353 Punica granatum HOM05D007416 ORTHO05D009329 1.5e-25 119.8 85 65.9
Sc17g0005840 Simmondsia chinensis HOM05D007416 ORTHO05D009329 1.5e-25 119.8 71 73.2
Ah.09g237760 Amaranthus hybridus HOM05D007416 ORTHO05D009329 1.9e-25 119.4 68 76.5
BcaB03g12097 Brassica carinata HOM05D007416 ORTHO05D009329 1.9e-25 119.4 88 68.2
SalBow8G2036 Salvia bowleyana HOM05D007416 ORTHO05D009329 4.3e-25 118.2 79 65.8
BraA07t28904Z Brassica rapa HOM05D007416 ORTHO05D009329 5.6e-25 117.9 86 66.3
CARHR028020 Cardamine hirsuta HOM05D007416 ORTHO05D009329 5.6e-25 117.9 79 69.6
TPR.G11747 Trifolium pratense HOM05D007416 ORTHO05D009329 5.6e-25 117.9 97 57.7
Phvul.006G180100 Phaseolus vulgaris HOM05D007416 ORTHO05D009329 9.6e-25 117.1 82 67.1
TPR.G39540 Trifolium pratense HOM05D007416 ORTHO05D009329 9.6e-25 117.1 97 57.7
C07p16790 Brassica napus HOM05D007416 ORTHO05D009329 1.6e-24 116.3 71 73.2
AL1G42170 Arabidopsis lyrata HOM05D007416 ORTHO05D009329 4.8e-24 114.8 66 80.3
AT1G28540 Arabidopsis thaliana HOM05D007416 ORTHO05D009329 4.8e-24 114.8 66 80.3
Os06g0524500 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 6.2e-24 114.4 67 70.1
Sp1g24790 Schrenkiella parvula HOM05D007416 ORTHO05D009329 6.2e-24 114.4 71 70.4
Psat1g201280 Pisum sativum HOM05D007416 ORTHO05D009329 8.1e-24 114.0 91 60.4
Ca_00403_v3 Cicer arietinum L. HOM05D007416 ORTHO05D009329 1.1e-23 113.6 101 55.4
Lj6g0009243 Lotus japonicus HOM05D007416 ORTHO05D009329 1.4e-23 113.2 92 59.8
VMungo0540G0454 Vigna mungo HOM05D007416 ORTHO05D009329 1.8e-23 112.8 72 69.4
arahy.Tifrunner.gnm1.ann1.46W2M6 Arachis hypogaea HOM05D007416 ORTHO05D009329 2.4e-23 112.5 87 58.6
Os06g0525000 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 2.4e-23 112.5 69 68.1
arahy.Tifrunner.gnm1.ann1.96U62E Arachis hypogaea HOM05D007416 ORTHO05D009329 4.0e-23 111.7 92 57.6
Actinidia07614 Actinidia chinensis HOM05D007416 ORTHO05D009329 2.0e-22 109.4 85 60.0
Glyma.13G152576 Glycine max HOM05D007416 ORTHO05D009329 2.0e-22 109.4 64 76.6
Rhsim02G0137800 Rhododendron simsii HOM05D007416 ORTHO05D009329 2.6e-22 109.0 144 43.1
Medtr2g014970 Medicago truncatula HOM05D007416 ORTHO05D009329 3.4e-22 108.6 87 60.9
HPP92_008637 Vanilla planifolia HOM05D007416 ORTHO05D009329 4.4e-22 108.2 90 58.9
Lalb_Chr20g0121431 Lupinus albus HOM05D007416 ORTHO05D009329 5.8e-22 107.8 73 65.8
EL10Ac8g20461 Beta vulgaris HOM05D007416 ORTHO05D009329 9.9e-22 107.1 67 70.1
BolC7t42186H Brassica oleracea HOM05D007416 ORTHO05D009329 1.3e-21 106.7 71 70.4
FAN11G0205 Fragaria x ananassa HOM05D007416 ORTHO05D009329 2.2e-21 105.9 55 83.6
Aa31LG6G11050 Aethionema arabicum HOM05D007416 ORTHO05D009329 4.9e-21 104.8 58 77.6
Mapoly0016s0097 Marchantia polymorpha HOM05D007416 ORTHO05D009329 1.0e-18 97.1 54 72.2
AUR62031107 Chenopodium quinoa HOM05D007416 ORTHO05D009329 2.5e-17 92.4 95 46.3
Pp3c24_10110 Physcomitrium patens HOM05D007416 ORTHO05D009329 1.1e-15 87.0 58 63.8
A07p11140 Brassica napus HOM05D007416 ORTHO05D009329 5.3e-15 84.7 58 67.2
AagrBONN_evm.TU.Sc2ySwM_362.2610 Anthoceros agrestis HOM05D007416 ORTHO05D009329 6.4e-13 77.8 65 49.2
Zm00001eb194760 Zea mays HOM05D007416 ORTHO05D009329 9.0e-07 57.4 29 75.9


User provided reference genes

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