Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G3857 Cannabis sativa HOM05D006715 ORTHO05D008345 0.0e+00 1379.0 679 100.0
Cfa018312 Carpinus fangiana HOM05D006715 ORTHO05D008345 2.6e-180 636.3 689 55.2
RcHm_v2.0_Chr6g0275051 Rosa chinensis HOM05D006715 ORTHO05D008345 4.5e-180 635.6 699 53.2
Prupe.8G033600 Prunus persica HOM05D006715 ORTHO05D008345 3.5e-177 625.9 706 52.4
MD05G1027900 Malus domestica HOM05D006715 ORTHO05D008345 6.0e-177 625.2 695 52.8
FvH4_2g13430 Fragaria vesca HOM05D006715 ORTHO05D008345 1.1e-175 620.9 696 52.7
FAN24G1213 Fragaria x ananassa HOM05D006715 ORTHO05D008345 1.6e-174 617.1 696 52.4
CiPaw.16G011000 Carya illinoinensis HOM05D006715 ORTHO05D008345 2.4e-157 560.1 617 54.0
Manes.02G180601 Manihot esculenta HOM05D006715 ORTHO05D008345 3.4e-156 556.2 696 49.1
TWI34G0194 Tripterygium wilfordii HOM05D006715 ORTHO05D008345 6.5e-155 552.0 727 47.5
Actinidia17784 Actinidia chinensis HOM05D006715 ORTHO05D008345 2.0e-151 540.4 693 47.9
RcHm_v2.0_Chr5g0050861 Rosa chinensis HOM05D006715 ORTHO05D008345 1.5e-148 530.8 575 53.0
QL09p013340 Quercus lobata HOM05D006715 ORTHO05D008345 2.6e-148 530.0 694 47.0
Thecc.08G154500 Theobroma cacao HOM05D006715 ORTHO05D008345 2.9e-147 526.6 687 46.6
Phvul.004G094200 Phaseolus vulgaris HOM05D006715 ORTHO05D008345 8.5e-147 525.0 680 48.2
arahy.Tifrunner.gnm1.ann1.6MC3QX Arachis hypogaea HOM05D006715 ORTHO05D008345 9.4e-146 521.5 722 44.5
Lj2g0009741 Lotus japonicus HOM05D006715 ORTHO05D008345 7.9e-145 518.5 686 46.6
arahy.Tifrunner.gnm1.ann1.SG7PGU Arachis hypogaea HOM05D006715 ORTHO05D008345 4.4e-143 512.7 740 43.4
VMungo0464G1764 Vigna mungo HOM05D006715 ORTHO05D008345 4.4e-143 512.7 696 46.8
Gorai.010G134600 Gossypium raimondii HOM05D006715 ORTHO05D008345 1.3e-142 511.1 681 47.0
Ciclev10000601m.g Citrus clementina HOM05D006715 ORTHO05D008345 6.3e-142 508.8 685 45.3
Potri.005G193500 Populus trichocarpa HOM05D006715 ORTHO05D008345 1.8e-141 507.3 690 47.4
Duzib093G1010 Durio zibethinus HOM05D006715 ORTHO05D008345 1.5e-140 504.2 684 45.6
Psat1g102000 Pisum sativum HOM05D006715 ORTHO05D008345 4.5e-140 502.7 680 46.2
Lj7A376T34 Lonicera japonica HOM05D006715 ORTHO05D008345 8.5e-139 498.4 697 45.8
Cpa.g.sc1027.1 Carica papaya HOM05D006715 ORTHO05D008345 2.5e-138 496.9 673 45.5
TAR381G1273 Trochodendron aralioides HOM05D006715 ORTHO05D008345 4.2e-138 496.1 711 45.4
MELO3C025024.2 Cucumis melo HOM05D006715 ORTHO05D008345 3.6e-137 493.0 700 46.0
PGR042G1662 Punica granatum HOM05D006715 ORTHO05D008345 3.6e-137 493.0 689 46.7
FAN27G2814 Fragaria x ananassa HOM05D006715 ORTHO05D008345 1.0e-136 491.5 583 52.5
ClCG08G002210 Citrullus lanatus HOM05D006715 ORTHO05D008345 6.7e-136 488.8 700 46.3
Gohir.A06G112504 Gossypium hirsutum HOM05D006715 ORTHO05D008345 1.1e-135 488.0 679 45.8
Medtr2g045070 Medicago truncatula HOM05D006715 ORTHO05D008345 1.1e-133 481.5 687 44.5
Nitab4.5_0001187g0100 Nicotiana tabacum HOM05D006715 ORTHO05D008345 7.0e-133 478.8 696 43.7
Sed0009104 Sechium edule HOM05D006715 ORTHO05D008345 1.0e-131 474.9 700 45.4
Atru.chr13.2084 Acer truncatum HOM05D006715 ORTHO05D008345 1.3e-131 474.6 677 44.6
Glyma.16G166500 Glycine max HOM05D006715 ORTHO05D008345 2.2e-131 473.8 687 43.5
Sopen04g027550 Solanum pennellii HOM05D006715 ORTHO05D008345 6.1e-129 465.7 706 41.4
Aqoxy5G00857 Aquilegia oxysepala HOM05D006715 ORTHO05D008345 3.0e-128 463.4 695 44.5
Eucgr.F02698 Eucalyptus grandis HOM05D006715 ORTHO05D008345 6.8e-128 462.2 677 43.7
CAN.G1215.10 Capsicum annuum HOM05D006715 ORTHO05D008345 2.0e-127 460.7 695 42.6
SGA_v2.0_scaffold25G11186 Striga asiatica HOM05D006715 ORTHO05D008345 3.4e-127 459.9 692 43.4
Nn5g28769 Nelumbo nucifera HOM05D006715 ORTHO05D008345 1.3e-126 458.0 720 42.8
Hund26691 Selenicereus undatus HOM05D006715 ORTHO05D008345 8.5e-123 445.3 706 41.6
PSO675G4790 Papaver somniferum HOM05D006715 ORTHO05D008345 2.5e-122 443.7 696 42.4
COL.COLO4_29857 Corchorus olitorius HOM05D006715 ORTHO05D008345 3.6e-121 439.9 507 48.1
Peaxi162Scf00599g00121 Petunia axillaris HOM05D006715 ORTHO05D008345 8.0e-121 438.7 677 42.8
THA.LOC104804670 Tarenaya hassleriana HOM05D006715 ORTHO05D008345 8.0e-121 438.7 688 40.4
TPR.G23114 Trifolium pratense HOM05D006715 ORTHO05D008345 1.1e-117 428.3 503 47.5
Migut.N03207 Erythranthe guttata HOM05D006715 ORTHO05D008345 1.4e-117 427.9 707 42.0
GSVIVG01034549001 Vitis vinifera HOM05D006715 ORTHO05D008345 1.3e-115 421.4 543 47.7
MSTRG.24217 Avicennia marina HOM05D006715 ORTHO05D008345 1.7e-115 421.0 763 39.2
vmacro20039 Vaccinium macrocarpon HOM05D006715 ORTHO05D008345 1.1e-114 418.3 687 40.8
Lsat_1_v5_gn_9_41180 Lactuca sativa HOM05D006715 ORTHO05D008345 1.5e-114 417.9 683 42.2
Haze_17767 Corylus avellana HOM05D006715 ORTHO05D008345 5.6e-114 416.0 405 55.3
Rhsim05G0181200 Rhododendron simsii HOM05D006715 ORTHO05D008345 1.8e-112 411.0 565 44.6
CsaV3_6G002600 Cucumis sativus L. HOM05D006715 ORTHO05D008345 3.0e-112 410.2 533 47.3
Sp1g32410 Schrenkiella parvula HOM05D006715 ORTHO05D008345 5.6e-106 389.4 680 39.9
ECA232G1953 Erigeron canadensis HOM05D006715 ORTHO05D008345 5.8e-103 379.4 678 40.3
Thhalv10003905m.g Eutrema salsugineum HOM05D006715 ORTHO05D008345 1.3e-102 378.3 673 38.2
unitig_21.g20147 Utricularia gibba HOM05D006715 ORTHO05D008345 1.6e-100 371.3 699 37.3
Gohir.D06G116900 Gossypium hirsutum HOM05D006715 ORTHO05D008345 1.7e-99 367.9 485 47.6
Aa31LG6G9940 Aethionema arabicum HOM05D006715 ORTHO05D008345 7.3e-98 362.5 702 38.0
AL1G51600 Arabidopsis lyrata HOM05D006715 ORTHO05D008345 1.6e-97 361.3 673 36.8
EL10Ac1g01568 Beta vulgaris HOM05D006715 ORTHO05D008345 1.5e-95 354.8 686 37.6
BcaB01g02294 Brassica carinata HOM05D006715 ORTHO05D008345 1.5e-95 354.8 675 37.0
HanXRQChr11g0320291 Helianthus annuus HOM05D006715 ORTHO05D008345 9.8e-95 352.1 681 40.1
Ca_26954_v3 Cicer arietinum L. HOM05D006715 ORTHO05D008345 1.4e-93 348.2 526 44.3
AT1G43245 Arabidopsis thaliana HOM05D006715 ORTHO05D008345 1.9e-93 347.8 670 36.6
BcaC04g24108 Brassica carinata HOM05D006715 ORTHO05D008345 1.6e-92 344.7 672 37.1
SalBow6G6609 Salvia bowleyana HOM05D006715 ORTHO05D008345 7.8e-92 342.4 694 35.9
DCAR_010095 Daucus carota HOM05D006715 ORTHO05D008345 1.1e-90 338.6 496 41.7
Dinv41067 Davidia involucrata HOM05D006715 ORTHO05D008345 6.2e-89 332.8 334 54.8
ATR0820G173 Amborella trichopoda HOM05D006715 ORTHO05D008345 7.6e-87 325.9 717 35.6
CDE12G0089 Ceratophyllum demersum HOM05D006715 ORTHO05D008345 1.6e-84 318.2 690 33.6
BolC9t53031H Brassica oleracea HOM05D006715 ORTHO05D008345 5.6e-82 309.7 571 37.8
PGSC0003DMG400024094 Solanum tuberosum HOM05D006715 ORTHO05D008345 5.6e-82 309.7 406 43.1
SHI09071 Sapria himalayana HOM05D006715 ORTHO05D008345 4.7e-81 306.6 766 33.6
C09p00980 Brassica napus HOM05D006715 ORTHO05D008345 1.1e-80 305.4 568 37.5
A09p00880 Brassica napus HOM05D006715 ORTHO05D008345 7.6e-79 299.3 571 38.0
BraA09t35760Z Brassica rapa HOM05D006715 ORTHO05D008345 1.3e-78 298.5 571 37.8
Os04g0423600 Oryza sativa ssp. japonica HOM05D006715 ORTHO05D008345 8.4e-78 295.8 692 31.8
Zm00001eb083170 Zea mays HOM05D006715 ORTHO05D008345 1.1e-77 295.4 700 31.9
Nitab4.5_0002764g0020 Nicotiana tabacum HOM05D006715 ORTHO05D008345 7.6e-71 272.7 374 41.4
Lalb_Chr01g0009561 Lupinus albus HOM05D006715 ORTHO05D008345 3.8e-70 270.4 317 47.3
AUR62026687 Chenopodium quinoa HOM05D006715 ORTHO05D008345 6.4e-70 269.6 332 46.7
CARHR035370 Cardamine hirsuta HOM05D006715 ORTHO05D008345 5.6e-66 256.5 460 38.3
Lj2g0026984 Lotus japonicus HOM05D006715 ORTHO05D008345 1.2e-63 248.8 211 61.6
MBI17_g41095_MAGBIO Magnolia biondii HOM05D006715 ORTHO05D008345 1.5e-63 248.4 382 44.5
CSS0020422 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 1.3e-62 245.4 303 45.9
Cc10_g14930 Coffea canephora HOM05D006715 ORTHO05D008345 1.8e-59 235.0 368 42.7
AUR62040600 Chenopodium quinoa HOM05D006715 ORTHO05D008345 1.2e-55 222.2 308 43.5
Lalb_Chr01g0009551 Lupinus albus HOM05D006715 ORTHO05D008345 7.6e-55 219.5 340 43.5
Glyma.16G166333 Glycine max HOM05D006715 ORTHO05D008345 4.6e-52 210.3 271 43.5
Glyma.16G166267 Glycine max HOM05D006715 ORTHO05D008345 6.0e-52 209.9 233 51.5
Potri.005G193701 Populus trichocarpa HOM05D006715 ORTHO05D008345 5.1e-51 206.8 317 41.3
SEGI_11470 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 7.4e-50 203.0 391 38.4
Carub.0001s3453 Capsella rubella HOM05D006715 ORTHO05D008345 2.8e-49 201.1 366 35.5
Sc02g0003950 Simmondsia chinensis HOM05D006715 ORTHO05D008345 1.8e-48 198.4 260 41.9
TAR381G1110 Trochodendron aralioides HOM05D006715 ORTHO05D008345 2.2e-46 191.4 304 41.1
Oeu031098.1 Olea europaea HOM05D006715 ORTHO05D008345 5.5e-45 186.8 388 35.8
HPP92_009296 Vanilla planifolia HOM05D006715 ORTHO05D008345 2.3e-43 181.4 369 36.9
CSS0028068 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 9.7e-42 176.0 315 36.8
Carub.0001s3454 Capsella rubella HOM05D006715 ORTHO05D008345 3.8e-30 137.5 228 39.9
SEGI_34185 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 1.6e-28 132.1 457 27.1
SEGI_20433 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 2.7e-28 131.3 252 40.1
HPP92_009297 Vanilla planifolia HOM05D006715 ORTHO05D008345 2.6e-26 124.8 300 31.3
CSS0046539 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 1.6e-23 115.5 158 48.7
Gohir.1Z049355 Gossypium hirsutum HOM05D006715 ORTHO05D008345 1.1e-21 109.4 145 46.9
Medtr3g062560 Medicago truncatula HOM05D006715 ORTHO05D008345 6.3e-17 93.6 199 40.2
QL02p038810 Quercus lobata HOM05D006715 ORTHO05D008345 2.7e-12 78.2 168 36.9
arahy.Tifrunner.gnm1.ann1.12T13Y Arachis hypogaea HOM05D006715 ORTHO05D008345 6.1e-12 77.0 57 59.6
CSS0020713 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 9.8e-10 69.7 158 37.3
Sc02g0003960 Simmondsia chinensis HOM05D006715 ORTHO05D008345 9.8e-10 69.7 98 50.0
CSS0011701 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 2.2e-06 58.5 33 69.7
MCO09G489 Micromonas commoda HOM05D006715 ORTHO05D008345 5.0e-06 57.4 243 22.6
PRCOL_00006858 Prasinoderma coloniale HOM05D004492 ORTHO05D005602 8.5e-06 56.6 141 25.5


User provided reference genes

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