Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G3754 Cannabis sativa HOM05D007022 ORTHO05D008868 2.1e-106 389.0 199 100.0
Cpa.g.sc62.15 Carica papaya HOM05D007022 ORTHO05D008868 2.8e-58 229.2 205 61.0
CiPaw.06G172800 Carya illinoinensis HOM05D007022 ORTHO05D008868 3.8e-55 218.8 198 58.1
Haze_10076 Corylus avellana HOM05D007022 ORTHO05D008868 8.5e-55 217.6 231 53.7
GSVIVG01031751001 Vitis vinifera HOM05D007022 ORTHO05D008868 8.5e-55 217.6 208 56.2
Rhsim11G0166300 Rhododendron simsii HOM05D007022 ORTHO05D008868 4.2e-54 215.3 200 59.0
MD10G1094200 Malus domestica HOM05D007022 ORTHO05D008868 7.2e-54 214.5 186 63.4
ClCG05G010000 Citrullus lanatus HOM05D007022 ORTHO05D008868 9.4e-54 214.2 207 59.9
PGR042G2146 Punica granatum HOM05D007022 ORTHO05D008868 9.4e-54 214.2 203 55.7
QL11p035981 Quercus lobata HOM05D007022 ORTHO05D008868 6.1e-53 211.5 199 59.3
Sed0002892 Sechium edule HOM05D007022 ORTHO05D008868 6.1e-53 211.5 200 62.5
Prupe.8G124000 Prunus persica HOM05D007022 ORTHO05D008868 1.0e-52 210.7 201 58.7
Potri.009G102400 Populus trichocarpa HOM05D007022 ORTHO05D008868 1.8e-52 209.9 202 57.4
Manes.07G082700 Manihot esculenta HOM05D007022 ORTHO05D008868 2.3e-52 209.5 214 57.0
vmacro02203 Vaccinium macrocarpon HOM05D007022 ORTHO05D008868 3.9e-52 208.8 201 56.7
TWI75G1380 Tripterygium wilfordii HOM05D007022 ORTHO05D008868 6.7e-52 208.0 202 58.9
FvH4_2g06130 Fragaria vesca HOM05D007022 ORTHO05D008868 1.1e-51 207.2 184 60.9
Atru.chr5.2709 Acer truncatum HOM05D007022 ORTHO05D008868 5.7e-51 204.9 184 60.9
Ciclev10029362m.g Citrus clementina HOM05D007022 ORTHO05D008868 7.4e-51 204.5 164 61.0
MELO3C019509.2 Cucumis melo HOM05D007022 ORTHO05D008868 7.4e-51 204.5 205 60.0
Nn1g04883 Nelumbo nucifera HOM05D007022 ORTHO05D008868 9.7e-51 204.1 198 55.1
Actinidia12953 Actinidia chinensis HOM05D007022 ORTHO05D008868 1.7e-50 203.4 190 58.9
Cc02_g18740 Coffea canephora HOM05D007022 ORTHO05D008868 1.7e-50 203.4 205 55.1
RcHm_v2.0_Chr6g0257061 Rosa chinensis HOM05D007022 ORTHO05D008868 3.7e-50 202.2 198 59.1
CSS0015269 Camellia sinensis var. sinensis HOM05D007022 ORTHO05D008868 8.2e-50 201.1 171 67.8
CsaV3_3G018570 Cucumis sativus L. HOM05D007022 ORTHO05D008868 8.2e-50 201.1 206 58.3
Ca_18680_v3 Cicer arietinum L. HOM05D007022 ORTHO05D008868 1.8e-49 199.9 182 63.2
Hma1.2p1_0370F.1_g137830 Hydrangea macrophylla HOM05D007022 ORTHO05D008868 1.8e-49 199.9 207 55.6
CDE04G2473 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 2.4e-49 199.5 202 55.0
Dinv23619 Davidia involucrata HOM05D007022 ORTHO05D008868 4.1e-49 198.7 202 56.4
Dinv42154 Davidia involucrata HOM05D007022 ORTHO05D008868 4.1e-49 198.7 194 56.7
TAR381G0954 Trochodendron aralioides HOM05D007022 ORTHO05D008868 7.0e-49 198.0 201 52.2
FAN15G0654 Fragaria x ananassa HOM05D007022 ORTHO05D008868 1.7e-47 193.4 160 60.6
MBI06_g36648_MAGBIO Magnolia biondii HOM05D007022 ORTHO05D008868 1.7e-47 193.4 188 56.9
Lalb_Chr16g0384701 Lupinus albus HOM05D007022 ORTHO05D008868 2.2e-47 193.0 196 58.7
Nn5g30258 Nelumbo nucifera HOM05D007022 ORTHO05D008868 2.9e-47 192.6 194 53.1
FAN20G2768 Fragaria x ananassa HOM05D007022 ORTHO05D008868 3.8e-47 192.2 160 60.0
FAN24G2553 Fragaria x ananassa HOM05D007022 ORTHO05D008868 5.0e-47 191.8 160 59.4
COL.COLO4_32660 Corchorus olitorius HOM05D007022 ORTHO05D003154 6.5e-47 191.4 200 52.5
Lj4g0019449 Lotus japonicus HOM05D007022 ORTHO05D008868 1.5e-46 190.3 172 55.8
Glyma.07G212100 Glycine max HOM05D007022 ORTHO05D008868 1.9e-46 189.9 196 57.1
Gohir.D13G038800 Gossypium hirsutum HOM05D007022 ORTHO05D008868 3.2e-46 189.1 196 52.6
Gorai.013G043500 Gossypium raimondii HOM05D007022 ORTHO05D008868 3.2e-46 189.1 196 52.6
Glyma.02G132900 Glycine max HOM05D007022 ORTHO05D008868 4.2e-46 188.7 196 56.6
Thecc.02G100400 Theobroma cacao HOM05D007022 ORTHO05D008868 4.2e-46 188.7 200 54.0
TPR.G28492 Trifolium pratense HOM05D007022 ORTHO05D008868 4.2e-46 188.7 186 59.7
Gohir.A13G040100 Gossypium hirsutum HOM05D007022 ORTHO05D008868 1.6e-45 186.8 196 52.0
Aa31LG8G6010 Aethionema arabicum HOM05D007022 ORTHO05D008868 3.6e-45 185.7 187 56.1
Migut.B00344 Erythranthe guttata HOM05D007022 ORTHO05D008868 4.7e-45 185.3 200 53.5
Psat7g125000 Pisum sativum HOM05D007022 ORTHO05D008868 1.4e-44 183.7 180 58.3
VMungo0251G0366 Vigna mungo HOM05D007022 ORTHO05D008868 1.4e-44 183.7 209 50.2
Phvul.003G292600 Phaseolus vulgaris HOM05D007022 ORTHO05D008868 1.8e-44 183.3 187 56.1
Thhalv10021599m.g Eutrema salsugineum HOM05D007022 ORTHO05D008868 2.3e-44 183.0 196 54.1
AT3G19220 Arabidopsis thaliana HOM05D007022 ORTHO05D008868 4.0e-44 182.2 196 53.6
AL3G32600 Arabidopsis lyrata HOM05D007022 ORTHO05D008868 1.5e-43 180.3 186 55.4
Aqoxy6G01341 Aquilegia oxysepala HOM05D007022 ORTHO05D008868 2.6e-43 179.5 119 73.1
Solyc01g108200.3 Solanum lycopersicum HOM05D007022 ORTHO05D008868 2.6e-43 179.5 113 71.7
Sopen01g050430 Solanum pennellii HOM05D007022 ORTHO05D008868 2.6e-43 179.5 113 71.7
Nitab4.5_0002543g0040 Nicotiana tabacum HOM05D007022 ORTHO05D008868 5.7e-43 178.3 205 52.2
arahy.Tifrunner.gnm1.ann1.059Z6S Arachis hypogaea HOM05D007022 ORTHO05D008868 7.5e-43 177.9 191 55.5
Carub.0003s1905 Capsella rubella HOM05D007022 ORTHO05D008868 9.7e-43 177.6 196 52.0
Lj9A358T46 Lonicera japonica HOM05D007022 ORTHO05D008868 9.7e-43 177.6 174 55.7
Sp3g17290 Schrenkiella parvula HOM05D007022 ORTHO05D008868 9.7e-43 177.6 187 54.0
unitig_26.g10239 Utricularia gibba HOM05D007022 ORTHO05D008868 9.7e-43 177.6 171 55.0
BraA05t21880Z Brassica rapa HOM05D007022 ORTHO05D008868 2.8e-42 176.0 196 53.1
Actinidia00443 Actinidia chinensis HOM05D007022 ORTHO05D008868 3.7e-42 175.6 177 57.6
A05p30420 Brassica napus HOM05D007022 ORTHO05D008868 4.8e-42 175.3 196 52.6
Lsat_1_v5_gn_9_110080 Lactuca sativa HOM05D007022 ORTHO05D008868 4.8e-42 175.3 118 75.4
HanXRQChr09g0251721 Helianthus annuus HOM05D007022 ORTHO05D008868 6.3e-42 174.9 111 81.1
Peaxi162Scf00016g01823 Petunia axillaris HOM05D007022 ORTHO05D008868 1.1e-41 174.1 117 75.2
BcaC05g28522 Brassica carinata HOM05D007022 ORTHO05D008868 1.4e-41 173.7 182 53.8
PSO675G2542 Papaver somniferum HOM05D007022 ORTHO05D008868 1.4e-41 173.7 145 64.8
PSO541G2619 Papaver somniferum HOM05D007022 ORTHO05D008868 1.8e-41 173.3 113 78.8
SGA_v2.0_scaffold13G06591 Striga asiatica HOM05D007022 ORTHO05D008868 3.1e-41 172.6 197 50.3
BcaB06g25978 Brassica carinata HOM05D007022 ORTHO05D008868 4.1e-41 172.2 196 52.0
BolC5t33329H Brassica oleracea HOM05D007022 ORTHO05D008868 4.1e-41 172.2 182 53.8
ECA240G1411 Erigeron canadensis HOM05D007022 ORTHO05D008868 4.1e-41 172.2 198 55.1
Nitab4.5_0007480g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 5.3e-41 171.8 147 60.5
MSTRG.27723 Avicennia marina HOM05D007022 ORTHO05D008868 7.0e-41 171.4 186 50.5
Sc08g0000700 Simmondsia chinensis HOM05D005091 ORTHO05D006047 1.2e-40 170.6 131 67.2
Oeu007283.1 Olea europaea HOM05D007022 ORTHO05D008868 2.0e-40 169.9 205 50.2
SalBow6G3975 Salvia bowleyana HOM05D007022 ORTHO05D008868 3.5e-40 169.1 145 60.0
Hund00236 Selenicereus undatus HOM05D007022 ORTHO05D008868 4.5e-40 168.7 207 51.2
arahy.Tifrunner.gnm1.ann1.WB2CJ6 Arachis hypogaea HOM05D007022 ORTHO05D008868 3.2e-38 162.5 169 51.5
PGSC0003DMG401025892 Solanum tuberosum HOM05D007022 ORTHO05D008868 7.2e-38 161.4 89 78.7
Medtr4g086255 Medicago truncatula HOM05D007022 ORTHO05D008868 3.6e-37 159.1 157 56.7
THA.LOC104798819 Tarenaya hassleriana HOM05D007022 ORTHO05D008868 3.6e-37 159.1 90 77.8
EL10Ac9g21683 Beta vulgaris HOM05D007022 ORTHO05D008868 1.4e-36 157.1 181 49.7
Ah.01g019040 Amaranthus hybridus HOM05D007022 ORTHO05D008868 1.8e-36 156.8 202 50.5
Sopen10g021420 Solanum pennellii HOM05D007022 ORTHO05D008868 5.2e-36 155.2 97 70.1
HPP92_016383 Vanilla planifolia HOM05D002198 ORTHO05D008868 6.8e-36 154.8 212 43.9
Oeu013707.1 Olea europaea HOM05D007022 ORTHO05D008868 2.8e-34 149.4 89 74.2
ATR0100G054 Amborella trichopoda HOM05D007022 ORTHO05D008868 3.7e-34 149.1 91 72.5
AUR62016784 Chenopodium quinoa HOM05D007022 ORTHO05D008868 2.7e-32 142.9 107 67.3
Nitab4.5_0005758g0030 Nicotiana tabacum HOM05D007022 ORTHO05D008868 2.9e-31 139.4 119 60.5
Nitab4.5_0012979g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 6.5e-31 138.3 136 55.9
Zm00001eb100830 Zea mays HOM05D007022 ORTHO05D008868 7.2e-30 134.8 211 37.9
Cfa004517 Carpinus fangiana HOM05D007022 ORTHO05D008868 1.6e-29 133.7 140 55.0
CDE03G0325 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 4.0e-28 129.0 74 77.0
Os09g0458400 Oryza sativa ssp. japonica HOM05D007022 ORTHO05D008868 6.3e-26 121.7 183 43.2
CBR_g29933 Chara braunii HOM05D007022 ORTHO05D008868 1.2e-24 117.5 108 50.9
Sabra09G0078400 Salix brachista HOM05D007022 ORTHO05D008868 1.6e-24 117.1 205 42.4
SMO232G0067 Selaginella moellendorffii HOM05D007022 ORTHO05D008868 5.9e-24 115.2 86 59.3
AagrBONN_evm.TU.Sc2ySwM_368.1030 Anthoceros agrestis HOM05D007022 ORTHO05D008868 1.3e-23 114.0 123 39.8
Pp3c1_42880 Physcomitrium patens HOM05D007022 ORTHO05D008868 6.6e-23 111.7 113 48.7
Sopen10g021450 Solanum pennellii HOM05D007022 ORTHO05D008868 4.7e-21 105.5 114 54.4
Pp3c2_400 Physcomitrium patens HOM05D007022 ORTHO05D008868 1.4e-20 104.0 106 45.3
Mapoly0186s0009 Marchantia polymorpha HOM05D007022 ORTHO05D008868 9.8e-19 97.8 179 39.1
DCAR_022028 Daucus carota HOM05D007022 ORTHO05D008868 9.2e-17 91.3 132 47.0
SEGI_10031 Sequoiadendron giganteum HOM05D007022 ORTHO05D008868 1.3e-15 87.4 66 71.2
PGSC0003DMG400006210 Solanum tuberosum HOM05D007022 ORTHO05D008868 1.6e-13 80.5 109 46.8
Rhsim11G0166200 Rhododendron simsii HOM05D007022 ORTHO05D008868 3.6e-13 79.3 68 58.8
CARHR094630 Cardamine hirsuta HOM05D007022 ORTHO05D008868 6.2e-13 78.6 137 43.1
ECA240G0576 Erigeron canadensis HOM05D007022 ORTHO05D008868 1.2e-11 74.3 55 60.0


User provided reference genes

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