Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G3707 Cannabis sativa HOM05D005447 ORTHO05D006730 6.6e-143 510.8 269 100.0
Cfa017935 Carpinus fangiana HOM05D005447 ORTHO05D006730 6.2e-109 397.9 243 79.4
Cpa.g.sc7.194 Carica papaya HOM05D005447 ORTHO05D006730 5.8e-107 391.3 241 78.8
Dinv27967 Davidia involucrata HOM05D005447 ORTHO05D006730 6.4e-106 387.9 243 76.5
CiPaw.16G030000 Carya illinoinensis HOM05D005447 ORTHO05D006730 1.9e-105 386.3 243 75.7
Actinidia30302 Actinidia chinensis HOM05D005447 ORTHO05D006730 5.4e-105 384.8 247 75.3
MD08G1073300 Malus domestica HOM05D005447 ORTHO05D006730 3.9e-103 378.6 247 74.5
Ciclev10009241m.g Citrus clementina HOM05D005447 ORTHO05D006730 5.1e-103 378.3 270 68.9
QL02p001555 Quercus lobata HOM05D005447 ORTHO05D006730 1.3e-101 373.6 246 72.8
Prupe.1G414700 Prunus persica HOM05D005447 ORTHO05D006730 1.6e-101 373.2 246 74.4
CSS0008615 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 8.1e-101 370.9 247 72.1
Eucgr.C03005 Eucalyptus grandis HOM05D005447 ORTHO05D006730 1.4e-100 370.2 246 70.7
Sed0025565 Sechium edule HOM05D005447 ORTHO05D006730 1.4e-100 370.2 269 68.4
Peaxi162Scf00436g00831 Petunia axillaris HOM05D005447 ORTHO05D006730 1.8e-100 369.8 249 72.7
RcHm_v2.0_Chr6g0310521 Rosa chinensis HOM05D005447 ORTHO05D006730 1.8e-100 369.8 242 71.9
vmacro00161 Vaccinium macrocarpon HOM05D005447 ORTHO05D006730 3.1e-100 369.0 265 69.8
Lju3103C0G11 Lonicera japonica HOM05D005447 ORTHO05D006730 1.2e-99 367.1 276 65.9
Sopen12g031820 Solanum pennellii HOM05D005447 ORTHO05D006730 1.2e-99 367.1 270 66.3
TWI34G1470 Tripterygium wilfordii HOM05D005447 ORTHO05D006730 1.2e-99 367.1 243 73.7
PGSC0003DMG400029302 Solanum tuberosum HOM05D005447 ORTHO05D006730 2.0e-99 366.3 270 66.7
Sabra18G0050000 Salix brachista HOM05D005447 ORTHO05D006730 2.6e-99 365.9 245 73.1
Nitab4.5_0000738g0170 Nicotiana tabacum HOM05D005447 ORTHO05D006730 4.5e-99 365.2 261 68.6
Ca_15869_v3 Cicer arietinum L. HOM05D005447 ORTHO05D006730 5.8e-99 364.8 267 67.8
Peaxi162Scf00064g01636 Petunia axillaris HOM05D005447 ORTHO05D006730 5.8e-99 364.8 242 72.3
Potri.018G061800 Populus trichocarpa HOM05D005447 ORTHO05D006730 9.9e-99 364.0 245 73.1
Solyc12g095920.2 Solanum lycopersicum HOM05D005447 ORTHO05D006730 9.9e-99 364.0 270 65.9
Lj1g0020487 Lotus japonicus HOM05D005447 ORTHO05D006730 1.3e-98 363.6 247 70.4
Psat5g036560 Pisum sativum HOM05D005447 ORTHO05D006730 1.7e-98 363.2 269 65.8
CSS0040006 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 2.9e-98 362.5 242 73.1
MELO3C016858.2 Cucumis melo HOM05D005447 ORTHO05D006730 8.4e-98 360.9 246 69.9
Manes.16G078100 Manihot esculenta HOM05D005447 ORTHO05D006730 1.1e-97 360.5 243 72.4
arahy.Tifrunner.gnm1.ann1.H6GXLW Arachis hypogaea HOM05D005447 ORTHO05D006730 1.4e-97 360.1 267 67.0
Hma1.2p1_2708F.1_g327220 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 1.4e-97 360.1 245 72.2
arahy.Tifrunner.gnm1.ann1.PT16FZ Arachis hypogaea HOM05D005447 ORTHO05D006730 1.9e-97 359.8 267 67.0
Atru.chr7.2018 Acer truncatum HOM05D005447 ORTHO05D006730 3.2e-97 359.0 243 72.0
EL10Ac2g03925 Beta vulgaris HOM05D005447 ORTHO05D006730 4.2e-97 358.6 266 66.2
Hma1.2p1_1213F.1_g267530 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 4.2e-97 358.6 245 71.8
PSO832G2924 Papaver somniferum HOM05D005447 ORTHO05D006730 5.4e-97 358.2 245 72.2
TAR626G0638 Trochodendron aralioides HOM05D005447 ORTHO05D006730 5.4e-97 358.2 235 73.2
CsaV3_4G035510 Cucumis sativus L. HOM05D005447 ORTHO05D006730 7.1e-97 357.8 246 69.5
THA.LOC104803734 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 9.3e-97 357.5 238 71.4
Prupe.6G150100 Prunus persica HOM05D005447 ORTHO05D006730 1.6e-96 356.7 245 71.4
Hund03355 Selenicereus undatus HOM05D005447 ORTHO05D006730 1.6e-96 356.7 233 72.5
Cc08_g10370 Coffea canephora HOM05D005447 ORTHO05D006730 2.1e-96 356.3 244 70.9
HanXRQChr09g0251181 Helianthus annuus HOM05D005447 ORTHO05D006730 2.1e-96 356.3 245 72.2
Lalb_Chr08g0245101 Lupinus albus HOM05D005447 ORTHO05D006730 3.5e-96 355.5 244 69.3
FvH4_2g32160 Fragaria vesca HOM05D005447 ORTHO05D006730 4.6e-96 355.1 242 68.6
Nn8g38949 Nelumbo nucifera HOM05D005447 ORTHO05D006730 4.6e-96 355.1 244 70.5
PSO063G2264 Papaver somniferum HOM05D005447 ORTHO05D006730 7.9e-96 354.4 245 71.8
Medtr3g081440 Medicago truncatula HOM05D005447 ORTHO05D006730 1.0e-95 354.0 269 66.2
Lsat_1_v5_gn_6_7400 Lactuca sativa HOM05D005447 ORTHO05D006730 1.8e-95 353.2 245 68.2
FAN27G1388 Fragaria x ananassa HOM05D005447 ORTHO05D006730 2.3e-95 352.8 242 68.2
Duzib168G1543 Durio zibethinus HOM05D005447 ORTHO05D006730 3.9e-95 352.1 247 72.9
Glyma.06G051000 Glycine max HOM05D005447 ORTHO05D006730 8.7e-95 350.9 272 64.7
Hma1.2p1_1944F.1_g308590 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 1.1e-94 350.5 246 72.4
Thecc.09G051400 Theobroma cacao HOM05D005447 ORTHO05D006730 1.5e-94 350.1 270 67.4
Gorai.009G046500 Gossypium raimondii HOM05D005447 ORTHO05D006730 1.9e-94 349.7 270 66.7
Gohir.A05G043700 Gossypium hirsutum HOM05D005447 ORTHO05D006730 2.5e-94 349.4 270 66.7
Gohir.D05G045300 Gossypium hirsutum HOM05D005447 ORTHO05D006730 4.3e-94 348.6 270 66.3
Duzib187G1160 Durio zibethinus HOM05D005447 ORTHO05D006730 5.6e-94 348.2 270 67.8
Sc06g0000920 Simmondsia chinensis HOM05D005447 ORTHO05D006730 7.4e-94 347.8 244 70.9
CARHR240980 Cardamine hirsuta HOM05D005447 ORTHO05D006730 2.1e-93 346.3 239 68.6
PGR044G0161 Punica granatum HOM05D005447 ORTHO05D006730 2.1e-93 346.3 245 70.2
C07p59440 Brassica napus HOM05D005447 ORTHO05D006730 1.4e-92 343.6 248 66.5
BolC7t46387H Brassica oleracea HOM05D005447 ORTHO05D006730 1.4e-92 343.6 248 66.5
Hma1.2p1_0482F.1_g162683 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 1.4e-92 343.6 237 73.0
Phvul.009G076500 Phaseolus vulgaris HOM05D005447 ORTHO05D006730 1.4e-92 343.6 267 62.5
VMungo1309G1567 Vigna mungo HOM05D005447 ORTHO05D006730 1.4e-92 343.6 267 62.5
BraA03t15210Z Brassica rapa HOM05D005447 ORTHO05D006730 3.1e-92 342.4 251 65.7
A03p61720 Brassica napus HOM05D005447 ORTHO05D006730 5.3e-92 341.7 248 66.1
ECA233G2666 Erigeron canadensis HOM05D005447 ORTHO05D006730 9.0e-92 340.9 237 70.5
Thhalv10025994m.g Eutrema salsugineum HOM05D005447 ORTHO05D006730 9.0e-92 340.9 229 70.7
Aqoxy6G02809 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 2.0e-91 339.7 240 69.6
Nitab4.5_0011306g0050 Nicotiana tabacum HOM05D005447 ORTHO05D006730 3.4e-91 339.0 276 62.0
AL7G18730 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 5.8e-91 338.2 232 68.5
AT4G32960 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 1.7e-90 336.7 232 68.5
Aa31sc248G10 Aethionema arabicum HOM05D005447 ORTHO05D006730 2.2e-90 336.3 239 67.8
BcaNung02148 Brassica carinata HOM05D005447 ORTHO05D006730 2.9e-90 335.9 238 67.2
Aqoxy7G03929 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 3.8e-90 335.5 242 68.6
SalBow4G2766 Salvia bowleyana HOM05D005447 ORTHO05D006730 6.4e-90 334.7 246 67.1
Sp7g30740 Schrenkiella parvula HOM05D005447 ORTHO05D006730 8.4e-90 334.3 238 66.8
HPP92_026778 Vanilla planifolia HOM05D005447 ORTHO05D006730 8.4e-90 334.3 239 67.4
Carub.0007s0752 Capsella rubella HOM05D005447 ORTHO05D006730 1.4e-89 333.6 232 67.7
COL.COLO4_21030 Corchorus olitorius HOM05D005447 ORTHO05D006730 2.4e-89 332.8 247 69.2
AUR62022047 Chenopodium quinoa HOM05D005447 ORTHO05D006730 4.6e-88 328.6 243 67.1
Psat5g106840 Pisum sativum HOM05D005447 ORTHO05D006730 7.9e-88 327.8 244 64.8
SGA_v2.0_scaffold1040G53805 Striga asiatica HOM05D005447 ORTHO05D006730 3.9e-87 325.5 249 64.3
MSTRG.11670 Avicennia marina HOM05D005447 ORTHO05D006730 8.7e-87 324.3 245 63.7
Lj7C280G4 Lonicera japonica HOM05D005447 ORTHO05D006730 3.7e-85 318.9 276 59.8
Migut.A00152 Erythranthe guttata HOM05D005447 ORTHO05D006730 1.4e-84 317.0 247 63.6
unitig_748.g8015 Utricularia gibba HOM05D005447 ORTHO05D006730 1.5e-83 313.5 241 63.5
DCAR_004444 Daucus carota HOM05D005447 ORTHO05D006730 2.6e-83 312.8 249 61.0
DCAR_004445 Daucus carota HOM05D005447 ORTHO05D006730 2.6e-83 312.8 239 61.5
CARHR240970 Cardamine hirsuta HOM05D005447 ORTHO05D006730 6.7e-79 298.1 228 64.9
Carub.0007s0751 Capsella rubella HOM05D005447 ORTHO05D006730 1.9e-78 296.6 218 67.0
THA.LOC104818575 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 1.9e-78 296.6 225 64.0
ATR0789G081 Amborella trichopoda HOM05D005447 ORTHO05D006730 3.7e-77 292.4 234 62.0
AUR62009180 Chenopodium quinoa HOM05D005447 ORTHO05D006730 4.8e-77 292.0 220 66.4
AT4G32970 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 5.3e-76 288.5 218 64.7
AL7G18720 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 2.0e-75 286.6 218 65.1
Os06g0150100 Oryza sativa ssp. japonica HOM05D005447 ORTHO05D006730 2.1e-72 276.6 269 50.9
Haze_18213 Corylus avellana HOM05D005447 ORTHO05D006730 3.0e-71 272.7 169 78.1
Ah.11g044670 Amaranthus hybridus HOM05D005447 ORTHO05D006730 8.7e-71 271.2 265 54.0
Zm00001eb270840 Zea mays HOM05D005447 ORTHO05D006730 1.5e-67 260.4 276 48.9
SEGI_08476 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 2.6e-67 259.6 216 58.3
Nitab4.5_0001179g0010 Nicotiana tabacum HOM05D005447 ORTHO05D006730 2.5e-65 253.1 196 63.8
Pp3c6_24590 Physcomitrium patens HOM05D005447 ORTHO05D006730 3.6e-64 249.2 228 54.4
CDE04G0748 Ceratophyllum demersum HOM05D005447 ORTHO05D006730 1.0e-63 247.7 178 66.9
AUR62022045 Chenopodium quinoa HOM05D005447 ORTHO05D006730 2.6e-62 243.0 169 68.6
ClCG05G017740 Citrullus lanatus HOM05D005447 ORTHO05D006730 7.4e-62 241.5 172 68.0
Mapoly0129s0035 Marchantia polymorpha HOM05D005447 ORTHO05D006730 5.3e-60 235.3 247 46.2
Oeu057690.3 Olea europaea HOM05D005447 ORTHO05D006730 2.6e-59 233.0 169 66.3
FAN15G0839 Fragaria x ananassa HOM05D005447 ORTHO05D006730 8.8e-55 218.0 148 66.9
CBR_g6395 Chara braunii HOM05D005447 ORTHO05D006730 3.8e-50 202.6 233 47.2
Nitab4.5_0000359g0050 Nicotiana tabacum HOM05D006502 ORTHO05D006730 6.1e-48 195.3 663 26.8
Eucgr.C03947 Eucalyptus grandis HOM05D005447 ORTHO05D006730 8.0e-48 194.9 156 62.2
SMO367G0921 Selaginella moellendorffii HOM05D005447 ORTHO05D006730 6.3e-45 185.3 217 43.3
AUR62009181 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.8e-44 183.7 128 71.1
FAN24G0255 Fragaria x ananassa HOM05D005447 ORTHO05D006730 1.8e-44 183.7 128 70.3
Oeu036349.1 Olea europaea HOM05D005447 ORTHO05D006730 7.0e-44 181.8 128 71.1
FAN20G2744 Fragaria x ananassa HOM05D005447 ORTHO05D006730 1.6e-43 180.6 128 69.5
AagrBONN_evm.TU.Sc2ySwM_344.4531 Anthoceros agrestis HOM05D005447 ORTHO05D006730 5.0e-42 175.6 170 51.2
MSTRG.25940 Avicennia marina HOM05D005447 ORTHO05D006730 5.9e-35 152.1 106 67.9
VMungo0251G2120 Vigna mungo HOM05D005447 ORTHO05D006730 4.2e-33 146.0 136 50.7
Actinidia01202 Actinidia chinensis HOM05D005447 ORTHO05D006730 1.0e-31 141.4 79 84.8
C01p05700 Brassica napus HOM05D005447 ORTHO05D006730 1.7e-26 124.0 98 64.3
BolC1t00551H Brassica oleracea HOM05D005447 ORTHO05D006730 1.7e-26 124.0 98 64.3
VMungo0540G0355 Vigna mungo HOM05D005447 ORTHO05D006730 2.3e-26 123.6 106 56.6
SEGI_23140 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 1.1e-25 121.3 127 50.4
AUR62025497 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.5e-25 120.9 75 76.0
TPR.G36227 Trifolium pratense HOM05D005447 ORTHO05D006730 1.9e-25 120.6 77 70.1
GSVIVG01035346001 Vitis vinifera HOM05D005447 ORTHO05D006730 2.8e-24 116.7 91 64.8
SHI18783 Sapria himalayana HOM05D005447 ORTHO05D006730 1.1e-20 104.8 75 64.0
AUR62022046 Chenopodium quinoa HOM05D005447 ORTHO05D006730 4.3e-17 92.8 243 31.7
Cre13.g604850 Chlamydomonas reinhardtii HOM05D005447 ORTHO05D006730 1.4e-15 87.8 258 31.8
Gorai.010G105200 Gossypium raimondii HOM05D005447 ORTHO05D006730 8.6e-10 68.6 61 55.7
Gohir.D06G091250 Gossypium hirsutum HOM05D005447 ORTHO05D006730 5.6e-09 65.9 64 53.1
Gohir.D06G091325 Gossypium hirsutum HOM05D005447 ORTHO05D006730 5.6e-09 65.9 64 53.1


User provided reference genes

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