Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G3703 Cannabis sativa HOM05D003443 ORTHO05D009887 8.8e-251 869.8 424 100.0
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 1.2e-138 497.3 414 59.9
QL09p035320 Quercus lobata HOM05D003443 ORTHO05D009887 1.7e-137 493.4 435 58.2
TWI56G0082 Tripterygium wilfordii HOM05D003443 ORTHO05D009887 3.0e-134 482.6 421 57.2
Prupe.1G501800 Prunus persica HOM05D003443 ORTHO05D009887 2.2e-132 476.5 430 55.8
Atru.chr13.1406 Acer truncatum HOM05D003443 ORTHO05D009887 1.5e-130 470.3 434 56.5
GSVIVG01008903001 Vitis vinifera HOM05D003443 ORTHO05D009887 3.4e-130 469.2 430 54.9
TAR628G0851 Trochodendron aralioides HOM05D003443 ORTHO05D009887 8.5e-129 464.5 430 55.1
Thecc.08G121100 Theobroma cacao HOM05D003443 ORTHO05D009887 3.9e-126 455.7 427 54.3
ClCG11G015590 Citrullus lanatus HOM05D003443 ORTHO05D009887 1.1e-125 454.1 421 53.4
Sed0010337 Sechium edule HOM05D003443 ORTHO05D009887 9.7e-125 451.1 421 52.5
Manes.02G161000 Manihot esculenta HOM05D003443 ORTHO05D009887 3.7e-124 449.1 422 53.8
RcHm_v2.0_Chr6g0295331 Rosa chinensis HOM05D003443 ORTHO05D009887 6.3e-124 448.4 435 53.8
MD08G1168100 Malus domestica HOM05D003443 ORTHO05D009887 1.4e-123 447.2 435 53.1
CsaV3_4G028430 Cucumis sativus L. HOM05D003443 ORTHO05D009887 4.1e-123 445.7 419 53.9
FvH4_2g26511 Fragaria vesca HOM05D003443 ORTHO05D009887 7.7e-122 441.4 434 52.8
QL09p036517 Quercus lobata HOM05D003443 ORTHO05D009887 1.3e-121 440.7 404 56.7
FAN15G1193 Fragaria x ananassa HOM05D002169 ORTHO05D006927 7.2e-120 434.9 430 52.6
Sabra05G0132100 Salix brachista HOM05D003443 ORTHO05D009887 7.2e-120 434.9 435 52.2
Gohir.A05G233300 Gossypium hirsutum HOM05D003443 ORTHO05D009887 1.8e-118 430.3 426 52.1
VMungo0647G1328 Vigna mungo HOM05D003443 ORTHO05D009887 1.2e-117 427.6 429 51.3
MELO3C010459.2 Cucumis melo HOM05D003443 ORTHO05D009887 1.7e-116 423.7 432 51.4
Gorai.009G244000 Gossypium raimondii HOM05D003443 ORTHO05D009887 2.2e-116 423.3 426 51.4
Nn5g28161 Nelumbo nucifera HOM05D003443 ORTHO05D009887 7.0e-115 418.3 425 50.6
Migut.C01151 Erythranthe guttata HOM05D003443 ORTHO05D009887 4.5e-114 415.6 424 49.1
RhsimUnG0094800 Rhododendron simsii HOM05D003443 ORTHO05D009887 4.5e-114 415.6 465 49.2
Hund16841 Selenicereus undatus HOM05D003443 ORTHO05D009887 1.0e-113 414.5 421 52.5
Eucgr.F03767 Eucalyptus grandis HOM05D003443 ORTHO05D009887 1.7e-113 413.7 428 48.4
Lalb_Chr10g0101921 Lupinus albus HOM05D003443 ORTHO05D009887 1.5e-112 410.6 431 49.7
Psat2g078480 Pisum sativum HOM05D003443 ORTHO05D009887 2.1e-111 406.8 432 50.5
Phvul.008G165600 Phaseolus vulgaris HOM05D003443 ORTHO05D009887 8.0e-111 404.8 429 48.5
Ca_03725_v3 Cicer arietinum L. HOM05D003443 ORTHO05D009887 1.8e-110 403.7 431 50.6
CAN.G48.26 Capsicum annuum HOM05D003443 ORTHO05D009887 4.0e-110 402.5 424 50.7
Nitab4.5_0002816g0090 Nicotiana tabacum HOM05D003443 ORTHO05D009887 5.2e-110 402.1 424 48.8
arahy.Tifrunner.gnm1.ann1.5F0RSX Arachis hypogaea HOM05D003443 ORTHO05D009887 9.8e-109 397.9 427 49.6
Lj1g0008620 Lotus japonicus HOM05D003443 ORTHO05D009887 9.8e-109 397.9 429 49.2
DCAR_003542 Daucus carota HOM05D003443 ORTHO05D009887 1.3e-108 397.5 423 46.8
PGSC0003DMG400014817 Solanum tuberosum HOM05D003443 ORTHO05D009887 3.7e-108 396.0 425 49.6
arahy.Tifrunner.gnm1.ann1.JR3K98 Arachis hypogaea HOM05D003443 ORTHO05D009887 6.3e-108 395.2 427 49.4
Medtr5g059070 Medicago truncatula HOM05D003443 ORTHO05D009887 1.4e-107 394.0 432 49.8
Lsat_1_v5_gn_1_8320 Lactuca sativa HOM05D003443 ORTHO05D009887 3.1e-107 392.9 427 48.9
MSTRG.1462 Avicennia marina HOM05D003443 ORTHO05D009887 1.3e-105 387.5 423 47.0
FAN27G2831 Fragaria x ananassa HOM05D003443 ORTHO05D009887 1.7e-105 387.1 397 50.4
HanXRQChr04g0111631 Helianthus annuus HOM05D003443 ORTHO05D009887 1.5e-104 384.0 421 48.2
Solyc03g093210.3 Solanum lycopersicum HOM05D003443 ORTHO05D009887 2.8e-103 379.8 449 46.8
SalBow7G0745 Salvia bowleyana HOM05D003443 ORTHO05D009887 1.4e-102 377.5 422 46.0
SalBow7G1610 Salvia bowleyana HOM05D003443 ORTHO05D009887 2.0e-101 373.6 422 46.0
Lj7C333G3 Lonicera japonica HOM05D003443 ORTHO05D009887 1.3e-100 370.9 363 52.1
Nitab4.5_0010023g0010 Nicotiana tabacum HOM05D003443 ORTHO05D009887 6.3e-100 368.6 500 42.0
Glyma.14G162900 Glycine max HOM05D003443 ORTHO05D009887 5.0e-97 359.0 368 49.2
ECA247G0446 Erigeron canadensis HOM05D003443 ORTHO05D009887 1.1e-96 357.8 390 48.5
SGA_v2.0_scaffold52G18985 Striga asiatica HOM05D003443 ORTHO05D009887 4.3e-96 355.9 423 45.2
Haze_00482 Corylus avellana HOM05D003443 ORTHO05D009887 2.8e-95 353.2 421 45.6
TPR.G8502 Trifolium pratense HOM05D003443 ORTHO05D009887 1.4e-91 340.9 389 47.8
Duzib093G0763 Durio zibethinus HOM05D003443 ORTHO05D009887 1.9e-91 340.5 360 49.7
EL10Ac1g00011 Beta vulgaris HOM05D003443 ORTHO05D009887 5.4e-91 339.0 431 45.0
Sc01g0001370 Simmondsia chinensis HOM05D003443 ORTHO05D009887 1.8e-86 323.9 376 44.9
Actinidia25684 Actinidia chinensis HOM05D003443 ORTHO05D009887 4.4e-85 319.3 312 52.2
AUR62004719 Chenopodium quinoa HOM05D003443 ORTHO05D009887 6.4e-84 315.5 380 45.5
AUR62023638 Chenopodium quinoa HOM05D003443 ORTHO05D009887 2.0e-77 293.9 372 43.8
Peaxi162Scf00241g00037 Petunia axillaris HOM05D003443 ORTHO05D009887 3.4e-77 293.1 443 39.5
Oeu050896.1 Olea europaea HOM05D003443 ORTHO05D009887 4.4e-77 292.7 450 39.6
vmacro00815 Vaccinium macrocarpon HOM05D003443 ORTHO05D009887 4.1e-75 286.2 458 41.3
Potri.005G174900 Populus trichocarpa HOM05D003443 ORTHO05D009887 7.8e-74 282.0 431 40.4
Medtr5g459020 Medicago truncatula HOM05D003443 ORTHO05D009887 1.7e-73 280.8 344 45.6
MBI06_g02575_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 1.6e-71 274.2 433 40.6
Aqoxy5G02443 Aquilegia oxysepala HOM05D003443 ORTHO05D009887 2.4e-70 270.4 265 50.6
Cc10_g11010 Coffea canephora HOM05D003443 ORTHO05D009887 3.9e-57 226.5 260 45.0
Sopen03g024010 Solanum pennellii HOM05D003443 ORTHO05D009887 5.6e-56 222.6 330 41.5
MBI06_g35594_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 4.5e-53 213.0 227 46.7
ATR0684G011 Amborella trichopoda HOM05D003443 ORTHO05D009887 2.9e-52 210.3 257 41.6
Cc10_g11020 Coffea canephora HOM05D003443 ORTHO05D009887 2.1e-47 194.1 153 58.8
Gohir.D05G235701 Gossypium hirsutum HOM05D003443 ORTHO05D009887 3.1e-46 190.3 205 47.8
Actinidia29454 Actinidia chinensis HOM05D003443 ORTHO05D009887 9.0e-46 188.7 211 49.8
Lj7E334T0 Lonicera japonica HOM05D003443 ORTHO05D009887 7.4e-32 142.5 85 74.1
MBI06_g44274_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 4.1e-30 136.7 319 31.0
Os04g0450500 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D009887 2.0e-29 134.4 261 33.7
PGSC0003DMG400021471 Solanum tuberosum HOM05D003443 ORTHO05D009887 7.4e-24 115.9 80 67.5
Aqoxy5G02442 Aquilegia oxysepala HOM05D003443 ORTHO05D009887 1.2e-21 108.6 154 42.9
COL.COLO4_12190 Corchorus olitorius HOM05D003443 ORTHO05D009887 1.5e-21 108.2 73 61.6
MBI06_g35595_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 6.7e-17 92.8 128 43.8
SEGI_24688 Sequoiadendron giganteum HOM05D003443 ORTHO05D009887 4.1e-14 83.6 157 33.8
Migut.K01194 Erythranthe guttata HOM05D003443 ORTHO05D009887 2.7e-10 70.9 49 67.3
Hma1.2p1_0248F.1_g102080 Hydrangea macrophylla HOM05D003443 ORTHO05D009887 1.5e-08 65.1 36 75.0
Zm00001eb081310 Zea mays HOM05D003443 ORTHO05D009887 3.3e-08 63.9 134 26.9


User provided reference genes

Program Settings