Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G3692 Cannabis sativa HOM05D008897 ORTHO05D000482 4.5e-129 464.5 225 100.0
CANSAT01G1225 Cannabis sativa HOM05D008897 ORTHO05D000482 4.7e-110 401.4 224 86.2
CANSAT54G0970 Cannabis sativa HOM05D008897 ORTHO05D000482 3.4e-84 315.5 190 80.0
CANSAT21G0297 Cannabis sativa HOM05D008897 ORTHO05D014793 5.4e-82 308.1 227 70.0
CANSAT80G0974 Cannabis sativa HOM05D008897 ORTHO05D000482 4.4e-76 288.5 226 67.3
CANSAT25G1535 Cannabis sativa HOM05D008897 ORTHO05D000482 3.2e-58 229.2 141 80.9
CANSAT25G3352 Cannabis sativa HOM05D008897 ORTHO05D000482 1.9e-50 203.4 108 89.8
CANSAT21G1985 Cannabis sativa HOM05D008897 ORTHO05D000482 1.1e-34 151.0 102 71.6
CANSAT01G1167 Cannabis sativa HOM05D008721 ORTHO05D000482 1.6e-33 147.1 236 37.7
CANSAT54G0871 Cannabis sativa HOM05D008721 ORTHO05D000482 3.9e-32 142.5 236 36.4
CANSAT25G2067 Cannabis sativa HOM05D002262 ORTHO05D000482 1.5e-31 140.6 221 38.0
CANSAT80G0150 Cannabis sativa HOM05D002262 ORTHO05D000482 3.7e-30 136.0 204 37.7
CANSAT56G3280 Cannabis sativa HOM05D008897 ORTHO05D000137 1.2e-25 120.9 109 60.6
CANSAT01G0432 Cannabis sativa HOM05D008897 ORTHO05D000482 3.6e-25 119.4 224 38.4
Nitab4.5_0001308g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.3e-23 112.8 187 34.2
Nitab4.5_0001896g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 9.7e-23 111.3 228 33.3
Nitab4.5_0002279g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.3e-22 110.9 158 36.1
CANSAT11G1281 Cannabis sativa HOM05D002262 ORTHO05D000482 1.7e-22 110.5 120 45.8
Nitab4.5_0000477g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.7e-22 109.4 188 35.1
CANSAT11G0751 Cannabis sativa HOM05D008636 ORTHO05D000482 6.3e-22 108.6 166 38.0
Nitab4.5_0009218g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.1e-21 107.8 167 36.5
Nitab4.5_0001863g0140 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.4e-21 107.5 188 33.5
Nitab4.5_0003869g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.4e-21 107.5 159 35.8
CANSAT25G1620 Cannabis sativa HOM05D008721 ORTHO05D000482 2.4e-21 106.7 132 40.2
CANSAT78G0534 Cannabis sativa HOM05D002262 ORTHO05D000482 5.3e-21 105.5 147 40.1
Nitab4.5_0000036g0380 Nicotiana tabacum HOM05D005063 ORTHO05D000482 6.9e-21 105.1 188 33.0
Nitab4.5_0013676g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.2e-20 104.4 189 33.3
Nitab4.5_0002951g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.5e-20 104.0 157 36.9
Nitab4.5_0003911g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.6e-20 103.2 187 32.1
Nitab4.5_0001927g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.3e-19 100.9 188 32.4
CANSAT01G1142 Cannabis sativa HOM05D009472 ORTHO05D000482 1.7e-19 100.5 235 32.3
CANSAT54G0857 Cannabis sativa HOM05D002262 ORTHO05D000482 3.8e-19 99.4 196 33.7
CANSAT54G1872 Cannabis sativa HOM05D002262 ORTHO05D000482 3.8e-19 99.4 196 33.7
CANSAT56G2811 Cannabis sativa HOM05D002262 ORTHO05D000482 3.8e-19 99.4 196 33.7
Nitab4.5_0002160g0110 Nicotiana tabacum HOM05D000713 ORTHO05D000482 3.8e-19 99.4 165 32.7
CANSAT56G1481 Cannabis sativa HOM05D009472 ORTHO05D000482 6.5e-19 98.6 235 31.5
Nitab4.5_0000924g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.4e-18 97.4 168 32.7
CANSAT21G1240 Cannabis sativa HOM05D020893 ORTHO05D000482 7.2e-18 95.1 136 39.7
Oeu000023.2 Olea europaea HOM05D002262 ORTHO05D000482 7.2e-18 95.1 135 34.8
Nitab4.5_0003111g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 9.4e-18 94.7 190 31.6
PGSC0003DMG400000031 Solanum tuberosum HOM05D005063 ORTHO05D000482 9.4e-18 94.7 159 31.4
Nitab4.5_0005016g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.7e-17 92.4 134 37.3
Nitab4.5_0005705g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.4e-16 90.9 157 33.8
Oeu031350.1 Olea europaea HOM05D002749 ORTHO05D000708 1.8e-16 90.5 167 29.3
Nitab4.5_0000326g0300 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.9e-16 89.4 217 30.9
Nitab4.5_0002951g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000482 6.7e-16 88.6 120 35.8
Oeu045265.1 Olea europaea HOM05D002749 ORTHO05D000708 6.7e-16 88.6 116 36.2
CANSAT80G2531 Cannabis sativa HOM05D009472 ORTHO05D000482 8.8e-16 88.2 189 30.7
Nitab4.5_0006450g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 8.8e-16 88.2 264 28.8
Oeu038220.1 Olea europaea HOM05D002262 ORTHO05D000482 8.8e-16 88.2 126 37.3
CANSAT01G2915 Cannabis sativa HOM05D008721 ORTHO05D000482 1.5e-15 87.4 234 29.5
PGSC0003DMG400041208 Solanum tuberosum HOM05D000679 ORTHO05D000482 2.0e-15 87.0 195 30.8
CANSAT54G0758 Cannabis sativa HOM05D002262 ORTHO05D000482 2.6e-15 86.7 206 28.2
Oeu048688.1 Olea europaea HOM05D002749 ORTHO05D000708 3.3e-15 86.3 106 39.6
Oeu046189.1 Olea europaea HOM05D002749 ORTHO05D000708 4.4e-15 85.9 100 39.0
Nitab4.5_0007360g0050 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.7e-15 85.5 159 30.8
Nitab4.5_0011961g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.7e-15 85.5 138 33.3
Oeu012179.1 Olea europaea HOM05D002749 ORTHO05D000708 5.7e-15 85.5 106 38.7
Sopen06g002980 Solanum pennellii HOM05D005063 ORTHO05D000482 1.7e-14 84.0 131 35.9
CANSAT25G2712 Cannabis sativa HOM05D002262 ORTHO05D000482 2.2e-14 83.6 162 29.6
CANSAT54G2680 Cannabis sativa HOM05D002262 ORTHO05D000482 2.2e-14 83.6 162 29.6
PGSC0003DMG400014694 Solanum tuberosum HOM05D005063 ORTHO05D000482 2.2e-14 83.6 131 35.9
Oeu037738.1 Olea europaea HOM05D002262 ORTHO05D000482 2.8e-14 83.2 162 27.8
Nitab4.5_0002944g0050 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.7e-14 82.8 159 32.1
Solyc06g008150.3 Solanum lycopersicum HOM05D005063 ORTHO05D000482 3.7e-14 82.8 131 35.9
Oeu037089.1 Olea europaea HOM05D002262 ORTHO05D000708 4.8e-14 82.4 160 28.1
Oeu001559.1 Olea europaea HOM05D002749 ORTHO05D000708 8.2e-14 81.6 97 38.1
Oeu035155.1 Olea europaea HOM05D002749 ORTHO05D000708 8.2e-14 81.6 98 37.8
CANSAT35G1168 Cannabis sativa HOM05D002262 ORTHO05D000482 1.4e-13 80.9 142 35.9
Nitab4.5_0008423g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.4e-13 80.9 200 28.5
Oeu035334.4 Olea europaea HOM05D002262 ORTHO05D000482 1.8e-13 80.5 136 31.6
SGA_v2.0_scaffold126G33830 Striga asiatica HOM05D000679 ORTHO05D000137 1.8e-13 80.5 234 27.4
SGA_v2.0_scaffold178G39480 Striga asiatica HOM05D002262 ORTHO05D000137 1.8e-13 80.5 234 27.4
Nitab4.5_0005199g0110 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.4e-13 80.1 147 30.6
SGA_v2.0_scaffold76G25157 Striga asiatica HOM05D002262 ORTHO05D000137 3.1e-13 79.7 234 27.4
SGA_v2.0_scaffold11G05593 Striga asiatica HOM05D002262 ORTHO05D000482 4.1e-13 79.3 137 29.9
Nitab4.5_0006980g0050 Nicotiana tabacum HOM05D005063 ORTHO05D000482 9.1e-13 78.2 218 28.9
CANSAT54G2644 Cannabis sativa HOM05D020893 ORTHO05D000482 1.2e-12 77.8 100 39.0
Nitab4.5_0002315g0040 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.2e-12 77.8 165 27.9
Ciclev10017905m.g Citrus clementina HOM05D007816 ORTHO05D000482 2.0e-12 77.0 156 33.3
Nitab4.5_0000227g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.0e-12 77.0 122 37.7
Nitab4.5_0013154g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.6e-12 76.6 120 34.2
Solyc10g150130.1 Solanum lycopersicum HOM05D002262 ORTHO05D000482 3.5e-12 76.3 148 29.7
CANSAT80G2652 Cannabis sativa HOM05D023333 ORTHO05D000137 4.5e-12 75.9 186 28.5
Oeu014738.1 Olea europaea HOM05D002749 ORTHO05D000708 4.5e-12 75.9 124 34.7
Nitab4.5_0004436g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 5.9e-12 75.5 224 25.4
SGA_v2.0_scaffold276G46661 Striga asiatica HOM05D000679 ORTHO05D000137 5.9e-12 75.5 134 32.8
SGA_v2.0_scaffold59G20643 Striga asiatica HOM05D000679 ORTHO05D000137 5.9e-12 75.5 134 32.8
CANSAT80G1435 Cannabis sativa HOM05D002262 ORTHO05D000482 7.7e-12 75.1 196 30.1
Nitab4.5_0000884g0110 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.0e-11 74.7 175 28.0
Nitab4.5_0004308g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.0e-11 74.7 173 27.7
Solyc11g061985.1 Solanum lycopersicum HOM05D002262 ORTHO05D000482 1.0e-11 74.7 145 30.3
Nitab4.5_0012299g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.3e-11 74.3 102 38.2
Nitab4.5_0010116g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.2e-11 73.6 230 26.1
Nitab4.5_0002459g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 5.0e-11 72.4 125 28.8
SGA_v2.0_scaffold23G10125 Striga asiatica HOM05D000679 ORTHO05D000137 8.5e-11 71.6 136 33.1
Ciclev10003531m.g Citrus clementina HOM05D002262 ORTHO05D000482 1.1e-10 71.2 155 29.0
Nitab4.5_0012202g0030 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.1e-10 71.2 90 40.0
CANSAT25G2171 Cannabis sativa HOM05D014892 ORTHO05D000482 1.9e-10 70.5 103 35.9
Nitab4.5_0010313g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.9e-10 70.5 107 30.8
Nitab4.5_0022061g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.9e-10 70.5 163 26.4
Nitab4.5_0008587g0040 Nicotiana tabacum HOM05D005877 ORTHO05D010356 3.2e-10 69.7 163 27.0
SGA_v2.0_scaffold219G42531 Striga asiatica HOM05D002262 ORTHO05D000482 3.2e-10 69.7 100 37.0
Nitab4.5_0000320g0140 Nicotiana tabacum HOM05D000679 ORTHO05D000482 4.2e-10 69.3 135 28.9
Nitab4.5_0004809g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 4.2e-10 69.3 135 31.9
Nitab4.5_0007629g0050 Nicotiana tabacum HOM05D005877 ORTHO05D010356 4.2e-10 69.3 107 29.9
Nitab4.5_0005376g0060 Nicotiana tabacum HOM05D005877 ORTHO05D000482 5.5e-10 68.9 180 26.7
Nitab4.5_0001173g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 7.2e-10 68.6 122 32.8
Nitab4.5_0008534g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 7.2e-10 68.6 99 39.4
Nitab4.5_0000571g0200 Nicotiana tabacum HOM05D005063 ORTHO05D000482 9.4e-10 68.2 169 25.4
Peaxi162Scf00048g01514 Petunia axillaris HOM05D010453 ORTHO05D012004 9.4e-10 68.2 172 29.1
Nitab4.5_0001663g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.2e-09 67.8 114 34.2
Oeu058507.1 Olea europaea HOM05D002749 ORTHO05D000708 1.6e-09 67.4 89 34.8
Oeu042562.1 Olea europaea HOM05D002262 ORTHO05D000482 2.7e-09 66.6 117 32.5
CANSAT80G1500 Cannabis sativa HOM05D008721 ORTHO05D000482 3.6e-09 66.2 77 41.6
Nitab4.5_0003022g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 3.6e-09 66.2 124 31.5
Oeu038998.1 Olea europaea HOM05D002749 ORTHO05D000708 3.6e-09 66.2 121 33.1
CANSAT78G1425 Cannabis sativa HOM05D020893 ORTHO05D000482 4.7e-09 65.9 74 43.2
Oeu009863.1 Olea europaea HOM05D002749 ORTHO05D000708 4.7e-09 65.9 145 29.0
Oeu053679.1 Olea europaea HOM05D002749 ORTHO05D000708 4.7e-09 65.9 124 29.0
Nitab4.5_0001329g0160 Nicotiana tabacum HOM05D005877 ORTHO05D010356 8.0e-09 65.1 102 31.4
Nitab4.5_0002297g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 8.0e-09 65.1 100 37.0
Oeu018450.1 Olea europaea HOM05D002749 ORTHO05D000708 8.0e-09 65.1 124 28.2
CANSAT80G0604 Cannabis sativa HOM05D009472 ORTHO05D000482 1.0e-08 64.7 100 36.0
Nitab4.5_0000113g0280 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.0e-08 64.7 77 39.0
TWI75G0551 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 1.4e-08 64.3 140 32.9
Ciclev10019150m.g Citrus clementina HOM05D007816 ORTHO05D000482 1.8e-08 63.9 140 29.3
Ciclev10033715m.g Citrus clementina HOM05D007816 ORTHO05D000397 1.8e-08 63.9 140 29.3
CANSAT35G1289 Cannabis sativa HOM05D008636 ORTHO05D000482 2.3e-08 63.5 123 35.0
Nitab4.5_0000008g0750 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.3e-08 63.5 125 34.4
Oeu012526.1 Olea europaea HOM05D002749 ORTHO05D000708 2.3e-08 63.5 124 28.2
Oeu030613.1 Olea europaea HOM05D002749 ORTHO05D000482 2.3e-08 63.5 114 28.9
Nitab4.5_0001530g0110 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.0e-08 62.8 197 31.5
CAN.G941.39 Capsicum annuum HOM05D000541 ORTHO05D000137 5.2e-08 62.4 142 30.3
Ciclev10020564m.g Citrus clementina HOM05D007816 ORTHO05D000397 6.7e-08 62.0 140 27.9
CANSAT78G2078 Cannabis sativa HOM05D008636 ORTHO05D000482 8.8e-08 61.6 71 42.3
Nitab4.5_0018926g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 8.8e-08 61.6 122 29.5
PSO063G4195 Papaver somniferum HOM05D007816 ORTHO05D000397 8.8e-08 61.6 162 29.6
TWI59G0381 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 8.8e-08 61.6 141 31.2
CANSAT56G4305 Cannabis sativa HOM05D002262 ORTHO05D000482 1.1e-07 61.2 120 32.5
TWI18G0509 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 1.1e-07 61.2 140 31.4
PSO421G0071 Papaver somniferum HOM05D007816 ORTHO05D000397 1.5e-07 60.8 162 29.0
CANSAT01G2439 Cannabis sativa HOM05D002262 ORTHO05D000482 2.0e-07 60.5 71 42.3
Ciclev10007144m.g Citrus clementina HOM05D007816 ORTHO05D000482 2.0e-07 60.5 140 28.6
Nitab4.5_0002338g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.0e-07 60.5 161 26.1
SGA_v2.0_scaffold90G27619 Striga asiatica HOM05D005877 ORTHO05D000482 2.6e-07 60.1 101 30.7
SGA_v2.0_scaffold4G02340 Striga asiatica HOM05D000679 ORTHO05D000482 3.3e-07 59.7 77 37.7
CANSAT54G1491 Cannabis sativa HOM05D008721 ORTHO05D000482 4.4e-07 59.3 135 32.6
Nitab4.5_0003887g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.7e-07 58.9 87 35.6
ClCG10G009800 Citrullus lanatus HOM05D039719 ORTHO05D017844 2.2e-06 57.0 72 41.7
Nitab4.5_0000744g0130 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.2e-06 57.0 132 28.0
CANSAT78G2134 Cannabis sativa HOM05D002262 ORTHO05D000482 2.8e-06 56.6 101 35.6
MELO3C033233.2 Cucumis melo HOM05D007907 ORTHO05D009079 3.7e-06 56.2 138 30.4
CANSAT64G1675 Cannabis sativa HOM05D002262 ORTHO05D000482 4.8e-06 55.8 99 32.3
CsaV3_1G032310 Cucumis sativus L. HOM05D010240 ORTHO05D000482 4.8e-06 55.8 167 27.5
CsaV3_6G008220 Cucumis sativus L. HOM05D010240 ORTHO05D000482 4.8e-06 55.8 167 27.5
TWI18G0445 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 4.8e-06 55.8 164 29.3
TWI77G0850 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 4.8e-06 55.8 164 29.3
Nitab4.5_0006819g0090 Nicotiana tabacum HOM05D000679 ORTHO05D000482 6.3e-06 55.5 137 27.7


User provided reference genes

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